Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P17_pT_M22
(572 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL032636-4|CAA21606.1| 123|Caenorhabditis elegans Hypothetical ... 65 3e-11
U39744-4|AAK18885.4| 389|Caenorhabditis elegans Hypothetical pr... 37 0.009
Z83233-1|CAB05760.3| 371|Caenorhabditis elegans Hypothetical pr... 31 0.77
AF273797-1|AAG15145.1| 323|Caenorhabditis elegans nuclear recep... 31 0.77
Z81044-8|CAI79147.2| 165|Caenorhabditis elegans Hypothetical pr... 30 1.0
Z70204-3|CAA94113.1| 385|Caenorhabditis elegans Hypothetical pr... 29 1.8
AM085500-1|CAJ30198.1| 947|Caenorhabditis elegans autophagy pro... 29 2.3
AF101315-4|AAO25988.1| 719|Caenorhabditis elegans Hypothetical ... 29 2.3
AF077529-1|AAC26253.1| 690|Caenorhabditis elegans Hypothetical ... 29 3.1
Z81039-2|CAB02774.1| 2150|Caenorhabditis elegans Hypothetical pr... 28 4.1
M85149-1|AAA28144.1| 2150|Caenorhabditis elegans zinc finger pro... 28 4.1
AC024793-1|AAF60692.2| 649|Caenorhabditis elegans Atm (ataxia t... 28 4.1
Z68302-2|CAA92631.1| 630|Caenorhabditis elegans Hypothetical pr... 28 5.4
Z49131-3|CAA88976.1| 1211|Caenorhabditis elegans Hypothetical pr... 28 5.4
Z47075-6|CAA87379.1| 538|Caenorhabditis elegans Hypothetical pr... 28 5.4
U70854-5|AAB09157.1| 589|Caenorhabditis elegans Dnaj domain (pr... 28 5.4
U53140-1|AAA96101.1| 276|Caenorhabditis elegans Hypothetical pr... 28 5.4
U49795-1|AAB03859.1| 673|Caenorhabditis elegans DNA-binding pro... 28 5.4
U49794-1|AAB03858.1| 673|Caenorhabditis elegans lag-1 protein. 28 5.4
AF500111-1|AAM27196.1| 538|Caenorhabditis elegans poly ADP-ribo... 28 5.4
AF100663-8|AAM98006.1| 671|Caenorhabditis elegans Lin-12 and gl... 28 5.4
AF100663-7|AAC68978.3| 673|Caenorhabditis elegans Lin-12 and gl... 28 5.4
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 27 7.2
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 27 7.2
Z98860-2|CAB11545.1| 337|Caenorhabditis elegans Hypothetical pr... 27 9.5
U41027-4|AAC48196.2| 455|Caenorhabditis elegans Hypothetical pr... 27 9.5
U41027-3|AAQ82846.1| 516|Caenorhabditis elegans Hypothetical pr... 27 9.5
AL110478-11|CAB54347.2| 1435|Caenorhabditis elegans Hypothetical... 27 9.5
AL023856-8|CAA19565.2| 326|Caenorhabditis elegans Hypothetical ... 27 9.5
>AL032636-4|CAA21606.1| 123|Caenorhabditis elegans Hypothetical
protein Y40B1B.7 protein.
Length = 123
Score = 65.3 bits (152), Expect = 3e-11
Identities = 38/104 (36%), Positives = 53/104 (50%), Gaps = 1/104 (0%)
Frame = -2
Query: 316 KSGRFWKSKKEK-FSTINKTKGLKQDFSKKTALRLELKRTKEISKQAXXXXXXXXXXXXX 140
KS R+WK+K+EK S I K K LK + KK L+ + K +
Sbjct: 15 KSNRWWKTKQEKKHSEIKKVKTLKSTWDKKMELKAKKDMVKRVQDNIREKQVQERQEKKE 74
Query: 139 XXXQNLKKAEENRKKSEXVQVITNTTKLKRMRKKQLRFIEKRDT 8
+ K+ EN +K+E VQ IT KLK+ +K+QLR I+ RDT
Sbjct: 75 RKVEQEKRRLENERKAEIVQKITKIHKLKKTKKRQLRSIQMRDT 118
>U39744-4|AAK18885.4| 389|Caenorhabditis elegans Hypothetical
protein C03F11.4 protein.
Length = 389
Score = 37.1 bits (82), Expect = 0.009
Identities = 26/87 (29%), Positives = 44/87 (50%), Gaps = 1/87 (1%)
Frame = -2
Query: 451 AKVSSIV-TDITKSRDKYKEVTIANNAPVLSEKRKQEKGKTIRGIPKSGRFWKSKKEKFS 275
A SS+ TDI+ D+ ++ N+ + S + K+++GKT + K+ R K +E+
Sbjct: 61 ATTSSVADTDISNICDQLLVLSTTNHKSMGSTRGKKKRGKTAKKAKKANRAQKITEEEIE 120
Query: 274 TINKTKGLKQDFSKKTALRLELKRTKE 194
I K K K D K LR E + ++
Sbjct: 121 AIKKKK--KLDADKAYELRQEQMKIRQ 145
>Z83233-1|CAB05760.3| 371|Caenorhabditis elegans Hypothetical
protein K06B4.1 protein.
Length = 371
Score = 30.7 bits (66), Expect = 0.77
Identities = 17/59 (28%), Positives = 30/59 (50%)
Frame = +3
Query: 273 VENFSFLDFQNLPDFGIPLIVFPFSCFLFSLRTGALFAIVTSLYLSRDFVISVTIEDTF 449
+ +FS +F N F ++F F+C LRTG + +L RD +++ + ED +
Sbjct: 152 ISHFSNFEFMNNISFADRKLIFSFNC----LRTGVFHGSMRTLREQRDCLLTPSGEDVY 206
>AF273797-1|AAG15145.1| 323|Caenorhabditis elegans nuclear receptor
NHR-51 protein.
Length = 323
Score = 30.7 bits (66), Expect = 0.77
Identities = 17/59 (28%), Positives = 30/59 (50%)
Frame = +3
Query: 273 VENFSFLDFQNLPDFGIPLIVFPFSCFLFSLRTGALFAIVTSLYLSRDFVISVTIEDTF 449
+ +FS +F N F ++F F+C LRTG + +L RD +++ + ED +
Sbjct: 104 ISHFSNFEFMNNISFADRKLIFSFNC----LRTGVFHGSMRTLREQRDCLLTPSGEDVY 158
>Z81044-8|CAI79147.2| 165|Caenorhabditis elegans Hypothetical
protein C30H6.12 protein.
Length = 165
Score = 30.3 bits (65), Expect = 1.0
Identities = 19/66 (28%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Frame = -2
Query: 376 APVLSEKRKQEKGKTIRGIPKSG--RFWKSKKEKFSTINKTKGLKQDFSKKTALRLELKR 203
+PVLS++R E+ + + +SG + S+K+K +T TK ++ KK A + ++
Sbjct: 47 SPVLSDRRSSEEKEKKKSKSRSGSKKRSSSQKKKTTTTTTTKTSQKTAKKKEAKDVTKEK 106
Query: 202 TKEISK 185
+E S+
Sbjct: 107 DRESSE 112
>Z70204-3|CAA94113.1| 385|Caenorhabditis elegans Hypothetical
protein C11G6.3 protein.
Length = 385
Score = 29.5 bits (63), Expect = 1.8
Identities = 18/60 (30%), Positives = 30/60 (50%)
Frame = -2
Query: 361 EKRKQEKGKTIRGIPKSGRFWKSKKEKFSTINKTKGLKQDFSKKTALRLELKRTKEISKQ 182
EKR++EK K + + R + +KE+ K K +++ K+ E +R KE KQ
Sbjct: 194 EKRREEKKKQKELLKEKERSERKEKERELEREKEKSREKEREKEREKEREKEREKEREKQ 253
>AM085500-1|CAJ30198.1| 947|Caenorhabditis elegans autophagy
protein 9 protein.
Length = 947
Score = 29.1 bits (62), Expect = 2.3
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = -2
Query: 499 NYTKILTKIVMADETQAKVSSIVTDITKSRDKYKEVTI 386
N+ K L IV E Q + S+VT + ++RD E++I
Sbjct: 624 NHIKELKAIVEDQEDQQQAQSVVTSLNRARDGKTELSI 661
>AF101315-4|AAO25988.1| 719|Caenorhabditis elegans Hypothetical
protein T22H9.2b protein.
Length = 719
Score = 29.1 bits (62), Expect = 2.3
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = -2
Query: 499 NYTKILTKIVMADETQAKVSSIVTDITKSRDKYKEVTI 386
N+ K L IV E Q + S+VT + ++RD E++I
Sbjct: 624 NHIKELKAIVEDQEDQQQAQSVVTSLNRARDGKTELSI 661
>AF077529-1|AAC26253.1| 690|Caenorhabditis elegans Hypothetical
protein C09E8.3 protein.
Length = 690
Score = 28.7 bits (61), Expect = 3.1
Identities = 25/75 (33%), Positives = 32/75 (42%), Gaps = 2/75 (2%)
Frame = +3
Query: 219 LNAVFLEKSCLRP--FVLLMVENFSFLDFQNLPDFGIPLIVFPFSCFLFSLRTGALFAIV 392
L+ + L L P F L++ F+ P G PLI+ PF L ALFA+V
Sbjct: 604 LSPLVLSPLILSPQVFTPLILSPFALNPLILTPMVGSPLILSPFVLSPIILSPQALFAVV 663
Query: 393 TSLYLSRDFVISVTI 437
S Y V S I
Sbjct: 664 LSPYALSPLVESKLI 678
>Z81039-2|CAB02774.1| 2150|Caenorhabditis elegans Hypothetical protein
C25D7.3 protein.
Length = 2150
Score = 28.3 bits (60), Expect = 4.1
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = -2
Query: 385 ANNAPVLSEKRKQEKGKTIRGIPKSGRFWKSKKEKFSTINKTKGLKQD 242
A PV E K++ GKT RG PK K K+ I +G K++
Sbjct: 1309 ATETPVAEESPKKKSGKTTRGRPK-----KVKENLKKRIQPRRGQKEE 1351
>M85149-1|AAA28144.1| 2150|Caenorhabditis elegans zinc finger protein
protein.
Length = 2150
Score = 28.3 bits (60), Expect = 4.1
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = -2
Query: 385 ANNAPVLSEKRKQEKGKTIRGIPKSGRFWKSKKEKFSTINKTKGLKQD 242
A PV E K++ GKT RG PK K K+ I +G K++
Sbjct: 1309 ATETPVAEESPKKKSGKTTRGRPK-----KVKENLKKRIQPRRGQKEE 1351
>AC024793-1|AAF60692.2| 649|Caenorhabditis elegans Atm (ataxia
telangectasia mutated)family protein 1 protein.
Length = 649
Score = 28.3 bits (60), Expect = 4.1
Identities = 22/89 (24%), Positives = 43/89 (48%), Gaps = 2/89 (2%)
Frame = -2
Query: 451 AKVSSIVTDITKSRDKYKEVTIANNAPVLSEKRKQEKGKTIRGIPKSGRFWKSKKEK--F 278
+K+ IV I ++ Y+E+ + + + +R + GKT+ P + +K K +
Sbjct: 232 SKLKEIVITIREAHQAYREIAMLDVRGNVRIQRVEINGKTMYRWPHDLKIFKCKLRQLPI 291
Query: 277 STINKTKGLKQDFSKKTALRLELKRTKEI 191
TI++ G D+S T + KR K++
Sbjct: 292 PTISQKIGCPGDYS--TTDLITWKRWKDV 318
>Z68302-2|CAA92631.1| 630|Caenorhabditis elegans Hypothetical
protein ZK792.5 protein.
Length = 630
Score = 27.9 bits (59), Expect = 5.4
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = -2
Query: 358 KRKQEKGKTIRGIPKSGRFWK 296
KRKQE K + GI S +FWK
Sbjct: 583 KRKQEIMKVLVGIHNSSKFWK 603
>Z49131-3|CAA88976.1| 1211|Caenorhabditis elegans Hypothetical protein
ZC373.4 protein.
Length = 1211
Score = 27.9 bits (59), Expect = 5.4
Identities = 31/152 (20%), Positives = 62/152 (40%), Gaps = 4/152 (2%)
Frame = -2
Query: 481 TKIVMADETQA----KVSSIVTDITKSRDKYKEVTIANNAPVLSEKRKQEKGKTIRGIPK 314
TKIVM E QA + ++ V TKS +K E T A+ V S ++K + ++
Sbjct: 849 TKIVMTSEKQATTTVQTTTSVKRTTKSSEKKVEHT-ADGKSVESSQKKNSQKDDVKVSQV 907
Query: 313 SGRFWKSKKEKFSTINKTKGLKQDFSKKTALRLELKRTKEISKQAXXXXXXXXXXXXXXX 134
+ + + + T+ K + + ++K+ E K T+ ++
Sbjct: 908 TTKKEEDSTQPAPTLTVKKNVVKQTAEKSTSEKEHKTTENKEQERIIKKSSTLKDKDVAQ 967
Query: 133 XQNLKKAEENRKKSEXVQVITNTTKLKRMRKK 38
+ + N +K + +VI T + ++ K
Sbjct: 968 VSLQQSIKVNGEKHKESKVIGTKTVINKLELK 999
>Z47075-6|CAA87379.1| 538|Caenorhabditis elegans Hypothetical
protein E02H1.4 protein.
Length = 538
Score = 27.9 bits (59), Expect = 5.4
Identities = 18/67 (26%), Positives = 28/67 (41%)
Frame = -2
Query: 463 DETQAKVSSIVTDITKSRDKYKEVTIANNAPVLSEKRKQEKGKTIRGIPKSGRFWKSKKE 284
DE ++V T +R KEV P K +G+ RGI K + K ++E
Sbjct: 87 DEPVPNKYAVVELATNARQTEKEVKKEEPEPEPKVDEKNTRGRKKRGIVKEKKEIKKEEE 146
Query: 283 KFSTINK 263
+N+
Sbjct: 147 PVEEVNE 153
>U70854-5|AAB09157.1| 589|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 11 protein.
Length = 589
Score = 27.9 bits (59), Expect = 5.4
Identities = 26/85 (30%), Positives = 40/85 (47%), Gaps = 7/85 (8%)
Frame = -2
Query: 427 DITKSRDKYKEVTIANNAPVLSEKRKQEKGKTIRGI-----PKSGRFWKSKKEKFSTINK 263
D + D+Y+ + E+R++E+ K IR + K R K KKE+ + +K
Sbjct: 244 DKERGEDRYERREMEKQNKAERERRRKEEAKRIRKLVDIAYAKDPRIIKFKKEQQAKKDK 303
Query: 262 TKGLKQDF--SKKTALRLELKRTKE 194
K KQ K+ A+ E KR KE
Sbjct: 304 AKEDKQRAIREKQEAIDRE-KREKE 327
>U53140-1|AAA96101.1| 276|Caenorhabditis elegans Hypothetical
protein ZC266.2 protein.
Length = 276
Score = 27.9 bits (59), Expect = 5.4
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = -2
Query: 463 DETQAKVSSIVTDITKSRDKYKEVTIANNAPVLSEKRKQ 347
D + K SS I+KSR EVTI++++ KR+Q
Sbjct: 135 DSSLKKFSSANVTISKSRTSNGEVTISSSSSYSRSKRRQ 173
>U49795-1|AAB03859.1| 673|Caenorhabditis elegans DNA-binding
protein LAG-1 protein.
Length = 673
Score = 27.9 bits (59), Expect = 5.4
Identities = 23/86 (26%), Positives = 39/86 (45%), Gaps = 2/86 (2%)
Frame = -2
Query: 472 VMADETQAKVSSIVTDITKSRDKYKEVTIANNAPVLSEKRKQEKGKTIRG--IPKSGRFW 299
++ D Q+ S + D +++KY+ V +A V + EK I G+ W
Sbjct: 190 LIGDSVQSLTSDRMIDFLSNKEKYECVISIFHAKVAQKSYGNEKRFFCPPPCIYLIGQGW 249
Query: 298 KSKKEKFSTINKTKGLKQDFSKKTAL 221
K KK++ + + KT LK K A+
Sbjct: 250 KLKKDRVAQLYKT--LKASAQKDAAI 273
>U49794-1|AAB03858.1| 673|Caenorhabditis elegans lag-1 protein.
Length = 673
Score = 27.9 bits (59), Expect = 5.4
Identities = 23/86 (26%), Positives = 39/86 (45%), Gaps = 2/86 (2%)
Frame = -2
Query: 472 VMADETQAKVSSIVTDITKSRDKYKEVTIANNAPVLSEKRKQEKGKTIRG--IPKSGRFW 299
++ D Q+ S + D +++KY+ V +A V + EK I G+ W
Sbjct: 190 LIGDSVQSLTSDRMIDFLSNKEKYECVISIFHAKVAQKSYGNEKRFFCPPPCIYLIGQGW 249
Query: 298 KSKKEKFSTINKTKGLKQDFSKKTAL 221
K KK++ + + KT LK K A+
Sbjct: 250 KLKKDRVAQLYKT--LKASAQKDAAI 273
>AF500111-1|AAM27196.1| 538|Caenorhabditis elegans poly ADP-ribose
metabolism enzyme-2 protein.
Length = 538
Score = 27.9 bits (59), Expect = 5.4
Identities = 18/67 (26%), Positives = 28/67 (41%)
Frame = -2
Query: 463 DETQAKVSSIVTDITKSRDKYKEVTIANNAPVLSEKRKQEKGKTIRGIPKSGRFWKSKKE 284
DE ++V T +R KEV P K +G+ RGI K + K ++E
Sbjct: 87 DEPVPNKYAVVELATNARQTEKEVKKEEPEPEPKVDEKNTRGRKKRGIVKEKKEIKKEEE 146
Query: 283 KFSTINK 263
+N+
Sbjct: 147 PVEEVNE 153
>AF100663-8|AAM98006.1| 671|Caenorhabditis elegans Lin-12 and glp-1
phenotype protein1, isoform b protein.
Length = 671
Score = 27.9 bits (59), Expect = 5.4
Identities = 23/86 (26%), Positives = 39/86 (45%), Gaps = 2/86 (2%)
Frame = -2
Query: 472 VMADETQAKVSSIVTDITKSRDKYKEVTIANNAPVLSEKRKQEKGKTIRG--IPKSGRFW 299
++ D Q+ S + D +++KY+ V +A V + EK I G+ W
Sbjct: 188 LIGDSVQSLTSDRMIDFLSNKEKYECVISIFHAKVAQKSYGNEKRFFCPPPCIYLIGQGW 247
Query: 298 KSKKEKFSTINKTKGLKQDFSKKTAL 221
K KK++ + + KT LK K A+
Sbjct: 248 KLKKDRVAQLYKT--LKASAQKDAAI 271
>AF100663-7|AAC68978.3| 673|Caenorhabditis elegans Lin-12 and glp-1
phenotype protein1, isoform a protein.
Length = 673
Score = 27.9 bits (59), Expect = 5.4
Identities = 23/86 (26%), Positives = 39/86 (45%), Gaps = 2/86 (2%)
Frame = -2
Query: 472 VMADETQAKVSSIVTDITKSRDKYKEVTIANNAPVLSEKRKQEKGKTIRG--IPKSGRFW 299
++ D Q+ S + D +++KY+ V +A V + EK I G+ W
Sbjct: 190 LIGDSVQSLTSDRMIDFLSNKEKYECVISIFHAKVAQKSYGNEKRFFCPPPCIYLIGQGW 249
Query: 298 KSKKEKFSTINKTKGLKQDFSKKTAL 221
K KK++ + + KT LK K A+
Sbjct: 250 KLKKDRVAQLYKT--LKASAQKDAAI 273
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 27.5 bits (58), Expect = 7.2
Identities = 33/151 (21%), Positives = 63/151 (41%), Gaps = 5/151 (3%)
Frame = -2
Query: 466 ADETQAKVSSIVTDITKSRDKYKEVTIANNAPVLSEKRKQEKGKTIRGIPKSGRFWKSKK 287
AD++ K S V D+ K K + A N ++ E + E IR + + ++ +
Sbjct: 11042 ADQSAEKTSLEVRDMKKKMKKKQVSGTAEN--LIGESNRDETSMEIRDL-NTQHSNQTGE 11098
Query: 286 EKFSTINKTKGLKQDFS---KKTALRLELKRTKEIS--KQAXXXXXXXXXXXXXXXXQNL 122
++ ST N + ++ +S K + +L + +EI K +NL
Sbjct: 11099 DESSTFNFGQKDQEQYSMVMKDVSKKLARQNAEEIQSGKLIPTTNEEKTGLALTGKNKNL 11158
Query: 121 KKAEENRKKSEXVQVITNTTKLKRMRKKQLR 29
KK EEN K + + +++ + + LR
Sbjct: 11159 KKGEENEKTKFEAKHLGSSSASDSLAESTLR 11189
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 27.5 bits (58), Expect = 7.2
Identities = 33/151 (21%), Positives = 63/151 (41%), Gaps = 5/151 (3%)
Frame = -2
Query: 466 ADETQAKVSSIVTDITKSRDKYKEVTIANNAPVLSEKRKQEKGKTIRGIPKSGRFWKSKK 287
AD++ K S V D+ K K + A N ++ E + E IR + + ++ +
Sbjct: 11042 ADQSAEKTSLEVRDMKKKMKKKQVSGTAEN--LIGESNRDETSMEIRDL-NTQHSNQTGE 11098
Query: 286 EKFSTINKTKGLKQDFS---KKTALRLELKRTKEIS--KQAXXXXXXXXXXXXXXXXQNL 122
++ ST N + ++ +S K + +L + +EI K +NL
Sbjct: 11099 DESSTFNFGQKDQEQYSMVMKDVSKKLARQNAEEIQSGKLIPTTNEEKTGLALTGKNKNL 11158
Query: 121 KKAEENRKKSEXVQVITNTTKLKRMRKKQLR 29
KK EEN K + + +++ + + LR
Sbjct: 11159 KKGEENEKTKFEAKHLGSSSASDSLAESTLR 11189
>Z98860-2|CAB11545.1| 337|Caenorhabditis elegans Hypothetical
protein Y26G10.2 protein.
Length = 337
Score = 27.1 bits (57), Expect = 9.5
Identities = 17/50 (34%), Positives = 26/50 (52%)
Frame = +3
Query: 180 ACLDISLVRFSSNLNAVFLEKSCLRPFVLLMVENFSFLDFQNLPDFGIPL 329
+CL + R S LN K+C+R F L++ F FL F N+ +G +
Sbjct: 114 SCLLLFCNRILSILNMYRKSKTCIRRFFELILYIFVFL-FPNIMFYGFQI 162
>U41027-4|AAC48196.2| 455|Caenorhabditis elegans Hypothetical
protein R08E3.3a protein.
Length = 455
Score = 27.1 bits (57), Expect = 9.5
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -2
Query: 121 KKAEENRKKSEXVQVITNTTKLKRMRKKQLR 29
K AE N++ E Q+I NT + +K Q+R
Sbjct: 287 KIAELNKQMEEDTQIIENTKQANAQKKLQMR 317
>U41027-3|AAQ82846.1| 516|Caenorhabditis elegans Hypothetical
protein R08E3.3b protein.
Length = 516
Score = 27.1 bits (57), Expect = 9.5
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -2
Query: 121 KKAEENRKKSEXVQVITNTTKLKRMRKKQLR 29
K AE N++ E Q+I NT + +K Q+R
Sbjct: 287 KIAELNKQMEEDTQIIENTKQANAQKKLQMR 317
>AL110478-11|CAB54347.2| 1435|Caenorhabditis elegans Hypothetical
protein Y26D4A.9 protein.
Length = 1435
Score = 27.1 bits (57), Expect = 9.5
Identities = 27/106 (25%), Positives = 45/106 (42%), Gaps = 3/106 (2%)
Frame = -2
Query: 502 TNYTKILTKIVMADETQAKVSSIVTDITKSRDKYKEVTIANNAPVLSEKRKQEKGKTIRG 323
++YT L K+ A++T AK+ + K + + +EV EK K+E K
Sbjct: 690 SDYTDCLNKVRKAEDTLAKIEN------KYKKESEEVKKTGKNKDKVEKTKEEVEKAKEE 743
Query: 322 IPKSGRFWKSKKEKFSTINK--TKGLKQDFS-KKTALRLELKRTKE 194
K ++ + EK + K K + DF +R LK +E
Sbjct: 744 FQKVKEEFQKEVEKVKKVEKELEKAKESDFKVYLDDVRRSLKNVRE 789
>AL023856-8|CAA19565.2| 326|Caenorhabditis elegans Hypothetical
protein Y94A7B.3 protein.
Length = 326
Score = 27.1 bits (57), Expect = 9.5
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = +3
Query: 282 FSFLDFQNLPDFGIPLIVFPFSCF 353
FSF F L DF + V PF CF
Sbjct: 50 FSFHFFSALMDFSVSFFVQPFVCF 73
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,249,524
Number of Sequences: 27780
Number of extensions: 166174
Number of successful extensions: 725
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 675
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 725
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1184216096
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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