Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_pT_M19
         (315 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    27   0.047
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    23   0.76 
EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    21   3.1  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    21   4.0  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    21   4.0  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    21   4.0  
DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        19   9.4  

>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 27.1 bits (57), Expect = 0.047
 Identities = 11/36 (30%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
 Frame = +2

Query: 137 VVAVTRVDLLRSC-QSYNEDGEQNEQFREHFEQFSK 241
           ++ V R +L++ C + + E  E  + +++ +EQFSK
Sbjct: 397 ILKVIRKNLVKKCLELFEELAEDKDGYKKFYEQFSK 432


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 23.0 bits (47), Expect = 0.76
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = -2

Query: 224 NVRETVHSVRRPRCSSGKT 168
           N RE+  S+ +PRC SG++
Sbjct: 85  NSRESSDSLVQPRCPSGES 103


>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 21.0 bits (42), Expect = 3.1
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = +2

Query: 68  VRSIGQGXVSGXTDVAWIRISV 133
           +  +  G +S  TD+AW RI+V
Sbjct: 90  IADLAVGLISVSTDIAW-RITV 110


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 20.6 bits (41), Expect = 4.0
 Identities = 10/33 (30%), Positives = 16/33 (48%)
 Frame = -1

Query: 180 LWQDLNRSTLVTATTITDIRIQATSVIPDTXPW 82
           ++  LNRS+  TAT I    +   +V     P+
Sbjct: 244 MYPHLNRSSPTTATAIASATVTIQNVSNTIPPF 276


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 20.6 bits (41), Expect = 4.0
 Identities = 10/33 (30%), Positives = 16/33 (48%)
 Frame = -1

Query: 180 LWQDLNRSTLVTATTITDIRIQATSVIPDTXPW 82
           ++  LNRS+  TAT I    +   +V     P+
Sbjct: 192 MYPHLNRSSPTTATAIASATVTIQNVSNTIPPF 224


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 20.6 bits (41), Expect = 4.0
 Identities = 10/33 (30%), Positives = 16/33 (48%)
 Frame = -1

Query: 180 LWQDLNRSTLVTATTITDIRIQATSVIPDTXPW 82
           ++  LNRS+  TAT I    +   +V     P+
Sbjct: 375 MYPHLNRSSPTTATAIASATVTIQNVSNTIPPF 407


>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 19.4 bits (38), Expect = 9.4
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = +1

Query: 139 CSRNQSRSVEVLPELQRGRRTE 204
           C R+ + SV  +  L RG+  E
Sbjct: 146 CDRSTAPSVSAISRLLRGKGGE 167


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 45,954
Number of Sequences: 336
Number of extensions: 646
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used:  5836655
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)