Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_pT_M15
         (681 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z74043-5|CAA98544.1|  588|Caenorhabditis elegans Hypothetical pr...    31   0.76 
Z81053-1|CAB02877.1|  385|Caenorhabditis elegans Hypothetical pr...    31   1.0  
Z12018-1|CAD88219.2|  774|Caenorhabditis elegans Hypothetical pr...    31   1.0  
Z11126-8|CAD88221.2|  774|Caenorhabditis elegans Hypothetical pr...    31   1.0  
AC006696-8|AAF39989.1|  120|Caenorhabditis elegans Hypothetical ...    30   1.3  
Z49207-3|CAA89071.1|  927|Caenorhabditis elegans Hypothetical pr...    29   3.1  
AF025467-5|AAB71038.2| 1115|Caenorhabditis elegans Hypothetical ...    29   4.1  
AF025467-4|AAN65300.1| 1130|Caenorhabditis elegans Hypothetical ...    29   4.1  
AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical ...    29   4.1  
Z98853-7|CAB57906.1| 1675|Caenorhabditis elegans Hypothetical pr...    28   5.4  
Z83223-4|CAB05716.2|  534|Caenorhabditis elegans Hypothetical pr...    28   5.4  
Z75530-10|CAA99796.2| 1675|Caenorhabditis elegans Hypothetical p...    28   5.4  
L13200-7|AAA28189.1|  206|Caenorhabditis elegans Prion-like-(q/n...    28   5.4  
AL032625-4|CAB63350.2|  792|Caenorhabditis elegans Hypothetical ...    28   5.4  
Z73425-2|CAA97788.1| 1126|Caenorhabditis elegans Hypothetical pr...    28   7.1  
Z82083-3|CAB04971.1|  756|Caenorhabditis elegans Hypothetical pr...    27   9.4  
Z81584-1|CAB04679.1|  217|Caenorhabditis elegans Hypothetical pr...    27   9.4  

>Z74043-5|CAA98544.1|  588|Caenorhabditis elegans Hypothetical
           protein T19B10.9 protein.
          Length = 588

 Score = 31.1 bits (67), Expect = 0.76
 Identities = 16/50 (32%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
 Frame = -3

Query: 289 PHP-ECLHPPSFQCSSDGEVGPQVVPEARLQLPTHTAQVEEASPQATPPP 143
           P P E   PP    S      P  VP +   +P + A ++++ P A PPP
Sbjct: 15  PGPGEACQPPMPASSFQNNGVPMTVPSSPQYIPANGAPLDQSGPIAPPPP 64


>Z81053-1|CAB02877.1|  385|Caenorhabditis elegans Hypothetical
           protein E02A10.2 protein.
          Length = 385

 Score = 30.7 bits (66), Expect = 1.0
 Identities = 17/53 (32%), Positives = 17/53 (32%)
 Frame = +3

Query: 132 GSTVGGGVACGDASSTCAVCVGNCSRASGTTCGPTSPSEEHWKEGGCRHSGWG 290
           G   GGG  CG     C    G C    G   G   P       GGC   G G
Sbjct: 76  GGGCGGGGGCGGGGGGCGGGGGGCGGGGGCGGGCAPPPPPPACGGGCGGGGGG 128



 Score = 27.9 bits (59), Expect = 7.1
 Identities = 12/33 (36%), Positives = 12/33 (36%)
 Frame = +3

Query: 132 GSTVGGGVACGDASSTCAVCVGNCSRASGTTCG 230
           G   GGG  CG     C    G C    G  CG
Sbjct: 147 GGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCG 179


>Z12018-1|CAD88219.2|  774|Caenorhabditis elegans Hypothetical
           protein ZK643.8 protein.
          Length = 774

 Score = 30.7 bits (66), Expect = 1.0
 Identities = 18/54 (33%), Positives = 19/54 (35%), Gaps = 1/54 (1%)
 Frame = +3

Query: 132 GSTVGGGVACGDASSTCAVCVGNCSRASGTTC-GPTSPSEEHWKEGGCRHSGWG 290
           G   GGG  CG     C    G C    G  C G +S        GGC   G G
Sbjct: 108 GGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGSSGGCGGGSSGGCGGGGGG 161


>Z11126-8|CAD88221.2|  774|Caenorhabditis elegans Hypothetical
           protein ZK643.8 protein.
          Length = 774

 Score = 30.7 bits (66), Expect = 1.0
 Identities = 18/54 (33%), Positives = 19/54 (35%), Gaps = 1/54 (1%)
 Frame = +3

Query: 132 GSTVGGGVACGDASSTCAVCVGNCSRASGTTC-GPTSPSEEHWKEGGCRHSGWG 290
           G   GGG  CG     C    G C    G  C G +S        GGC   G G
Sbjct: 108 GGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGSSGGCGGGSSGGCGGGGGG 161


>AC006696-8|AAF39989.1|  120|Caenorhabditis elegans Hypothetical
           protein W08E12.2 protein.
          Length = 120

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 13/35 (37%), Positives = 14/35 (40%)
 Frame = +3

Query: 129 SGSTVGGGVACGDASSTCAVCVGNCSRASGTTCGP 233
           S    GGG   G     C  C GN    +G  CGP
Sbjct: 17  SAQCFGGGCGGGCFGGNCGGCSGNNCGCNGNNCGP 51


>Z49207-3|CAA89071.1|  927|Caenorhabditis elegans Hypothetical
           protein R07E3.6 protein.
          Length = 927

 Score = 29.1 bits (62), Expect = 3.1
 Identities = 13/34 (38%), Positives = 17/34 (50%)
 Frame = -3

Query: 202 QLPTHTAQVEEASPQATPPPTVDPDRTKNXKPXT 101
           Q+P    Q  + +P+ T PPT  P  T N  P T
Sbjct: 763 QVPLPVVQTTQTAPKPTLPPTTLPVLTTNKTPRT 796


>AF025467-5|AAB71038.2| 1115|Caenorhabditis elegans Hypothetical
           protein R148.3a protein.
          Length = 1115

 Score = 28.7 bits (61), Expect = 4.1
 Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 7/60 (11%)
 Frame = -3

Query: 289 PHPECLHPPSFQCSSDGEV---GPQVVPEARLQLPTHTAQV--EEASPQA--TPPPTVDP 131
           P P    PP+     + +     P+  PEA  Q+P  TAQ+  E A P+A   P PT  P
Sbjct: 375 PPPPAPPPPAPAVPEEAQAPTPAPEEAPEA--QIPAETAQIPPENAVPEAPEEPAPTTTP 432


>AF025467-4|AAN65300.1| 1130|Caenorhabditis elegans Hypothetical
           protein R148.3b protein.
          Length = 1130

 Score = 28.7 bits (61), Expect = 4.1
 Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 7/60 (11%)
 Frame = -3

Query: 289 PHPECLHPPSFQCSSDGEV---GPQVVPEARLQLPTHTAQV--EEASPQA--TPPPTVDP 131
           P P    PP+     + +     P+  PEA  Q+P  TAQ+  E A P+A   P PT  P
Sbjct: 387 PPPPAPPPPAPAVPEEAQAPTPAPEEAPEA--QIPAETAQIPPENAVPEAPEEPAPTTTP 444


>AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical
            protein Y40C5A.3 protein.
          Length = 2344

 Score = 28.7 bits (61), Expect = 4.1
 Identities = 12/36 (33%), Positives = 18/36 (50%)
 Frame = -2

Query: 572  YVPQQENEVYYPQQPENPIFSPTQATELADPTEKVE 465
            YVPQ+      P  PE    +P+Q   + +PT  +E
Sbjct: 1812 YVPQETQAPIAPSNPEPVQPNPSQTVSIPEPTGNIE 1847



 Score = 28.7 bits (61), Expect = 4.1
 Identities = 12/41 (29%), Positives = 18/41 (43%)
 Frame = +3

Query: 132  GSTVGGGVACGDASSTCAVCVGNCSRASGTTCGPTSPSEEH 254
            G   GGG +CG   ++   C G     S + C P + +  H
Sbjct: 2136 GGCSGGGNSCGGGCNSGGSCGGGGGGCSSSCCQPQTSATSH 2176


>Z98853-7|CAB57906.1| 1675|Caenorhabditis elegans Hypothetical protein
            C47E8.8 protein.
          Length = 1675

 Score = 28.3 bits (60), Expect = 5.4
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = -3

Query: 217  PEARLQLPTHTAQVEEASPQATPPPTVDPDRTKN 116
            PEA++ L T T +  EAS    P P +D +  +N
Sbjct: 1047 PEAQIPLETRTLEPSEAS-SVQPEPPIDQEEAEN 1079


>Z83223-4|CAB05716.2|  534|Caenorhabditis elegans Hypothetical
           protein E01G4.4 protein.
          Length = 534

 Score = 28.3 bits (60), Expect = 5.4
 Identities = 13/45 (28%), Positives = 21/45 (46%)
 Frame = -2

Query: 656 RQPEAAQAPSTGQVYIPDRRRQTLADTXYVPQQENEVYYPQQPEN 522
           +Q +    P     Y P R++Q      Y P+Q+ +  Y QQ +N
Sbjct: 39  QQQQQQGRPQQYAGYPPQRQQQQYNMNAYAPRQQQQQQYQQQQQN 83


>Z75530-10|CAA99796.2| 1675|Caenorhabditis elegans Hypothetical
            protein C47E8.8 protein.
          Length = 1675

 Score = 28.3 bits (60), Expect = 5.4
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = -3

Query: 217  PEARLQLPTHTAQVEEASPQATPPPTVDPDRTKN 116
            PEA++ L T T +  EAS    P P +D +  +N
Sbjct: 1047 PEAQIPLETRTLEPSEAS-SVQPEPPIDQEEAEN 1079


>L13200-7|AAA28189.1|  206|Caenorhabditis elegans
           Prion-like-(q/n-rich)-domain-bearingprotein protein 96
           protein.
          Length = 206

 Score = 28.3 bits (60), Expect = 5.4
 Identities = 12/27 (44%), Positives = 15/27 (55%)
 Frame = -2

Query: 566 PQQENEVYYPQQPENPIFSPTQATELA 486
           PQQ+   Y PQQP +PI     A  +A
Sbjct: 6   PQQQQPGYQPQQPSHPIVGAGAAPTMA 32


>AL032625-4|CAB63350.2|  792|Caenorhabditis elegans Hypothetical
           protein Y37H9A.3 protein.
          Length = 792

 Score = 28.3 bits (60), Expect = 5.4
 Identities = 19/54 (35%), Positives = 25/54 (46%)
 Frame = -3

Query: 286 HPECLHPPSFQCSSDGEVGPQVVPEARLQLPTHTAQVEEASPQATPPPTVDPDR 125
           HP    PP  Q +   E  P  +P+ +   P  TA    A+P AT  PT DP +
Sbjct: 217 HPPA--PPIRQAAHAAESSPPPIPQRKSSAPAPTA----AAPPATKEPT-DPKK 263


>Z73425-2|CAA97788.1| 1126|Caenorhabditis elegans Hypothetical
           protein F12F6.6 protein.
          Length = 1126

 Score = 27.9 bits (59), Expect = 7.1
 Identities = 16/49 (32%), Positives = 22/49 (44%)
 Frame = -2

Query: 650 PEAAQAPSTGQVYIPDRRRQTLADTXYVPQQENEVYYPQQPENPIFSPT 504
           P++ QAPS          +Q  A T  +PQ     + P QP + I  PT
Sbjct: 121 PQSVQAPSATPAGPLQAMQQAPAPTPGIPQMNQGAHLPPQP-HQIHQPT 168


>Z82083-3|CAB04971.1|  756|Caenorhabditis elegans Hypothetical
           protein ZK1010.5 protein.
          Length = 756

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 15/62 (24%), Positives = 21/62 (33%), Gaps = 1/62 (1%)
 Frame = -3

Query: 289 PHPECLHPPSFQCSSDGEVGPQVVPEARLQLPTH-TAQVEEASPQATPPPTVDPDRTKNX 113
           P PE    P        E     +P+     P     +    +PQ  PPP+  P+     
Sbjct: 594 PEPEPKSTPEPVTDGPNESQSTALPQQTTDAPVDPVTEASPLNPQPPPPPSPSPEPEPEP 653

Query: 112 KP 107
           KP
Sbjct: 654 KP 655


>Z81584-1|CAB04679.1|  217|Caenorhabditis elegans Hypothetical
           protein T04C12.1 protein.
          Length = 217

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 14/41 (34%), Positives = 21/41 (51%)
 Frame = -3

Query: 199 LPTHTAQVEEASPQATPPPTVDPDRTKNXKPXT*MXIETMS 77
           +P H A   E  P  TPPP +DP   +  K  + +  E++S
Sbjct: 1   MPEHQAVDIEHVPIVTPPPYMDPANAQAKKKMSRIRKESVS 41


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,217,537
Number of Sequences: 27780
Number of extensions: 266495
Number of successful extensions: 1198
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1052
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1195
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1550199966
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)