Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_pT_M13
         (716 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q960M4 Cluster: LD45324p; n=7; cellular organisms|Rep: ...    40   0.046
UniRef50_Q239U5 Cluster: Putative uncharacterized protein; n=1; ...    40   0.081
UniRef50_Q8CXD1 Cluster: Coproporphyrinogen oxidase III; n=1; Oc...    36   1.00 
UniRef50_A6NG06 Cluster: Uncharacterized protein PRDX5; n=4; Hom...    36   1.00 
UniRef50_A6NC19 Cluster: Uncharacterized protein PRDX5; n=9; Coe...    36   1.00 
UniRef50_P30044 Cluster: Peroxiredoxin-5, mitochondrial precurso...    36   1.00 
UniRef50_Q6GPY3 Cluster: MGC82521 protein; n=2; Xenopus|Rep: MGC...    36   1.3  
UniRef50_Q54YF4 Cluster: Putative uncharacterized protein; n=1; ...    34   3.0  
UniRef50_Q23JX9 Cluster: Putative uncharacterized protein; n=1; ...    33   7.0  
UniRef50_A2FZI4 Cluster: Putative uncharacterized protein; n=1; ...    33   7.0  

>UniRef50_Q960M4 Cluster: LD45324p; n=7; cellular organisms|Rep:
           LD45324p - Drosophila melanogaster (Fruit fly)
          Length = 190

 Score = 40.3 bits (90), Expect = 0.046
 Identities = 18/27 (66%), Positives = 21/27 (77%)
 Frame = -1

Query: 716 DSKVQDXNVEPDGTGLSCSLADKIKVK 636
           + KV + NVEPDGTGLSCSLA+ I  K
Sbjct: 164 NGKVTELNVEPDGTGLSCSLANNIGKK 190


>UniRef50_Q239U5 Cluster: Putative uncharacterized protein; n=1;
            Tetrahymena thermophila SB210|Rep: Putative
            uncharacterized protein - Tetrahymena thermophila SB210
          Length = 2709

 Score = 39.5 bits (88), Expect = 0.081
 Identities = 26/102 (25%), Positives = 48/102 (47%), Gaps = 1/102 (0%)
 Frame = +2

Query: 110  FFFVLALCAVFRNYTNSERRHFENFLILTKT*QEILNATAKMLLYIFEVFNYINSKSKRS 289
            ++++    A     TN + +     + L    Q ++     +++Y+F   +Y++S S+  
Sbjct: 2145 YYYIYISNATLITITNFQFQQTAQLIDLYSDQQNLIELNLPVVVYVFNTLSYVDSFSEYQ 2204

Query: 290  QTILFKSIVRCVRLFNSVALY-VKLLS*QPKQINNMKTRINA 412
            QTI    I+      NS+ALY VK L  Q  Q+N    ++ A
Sbjct: 2205 QTITNDEIIHIEA--NSIALYSVKFLQLQSFQLNTQIIKLFA 2244


>UniRef50_Q8CXD1 Cluster: Coproporphyrinogen oxidase III; n=1;
           Oceanobacillus iheyensis|Rep: Coproporphyrinogen oxidase
           III - Oceanobacillus iheyensis
          Length = 391

 Score = 35.9 bits (79), Expect = 1.00
 Identities = 13/35 (37%), Positives = 22/35 (62%)
 Frame = +3

Query: 441 DYIKCIIYDFDCALVTFNTAFASIYLGS*TPREKN 545
           DYI+ +I++ DC ++ +N    +IY+G  TP   N
Sbjct: 35  DYIEALIHEIDCTVIGYNVHVDTIYMGGGTPTALN 69


>UniRef50_A6NG06 Cluster: Uncharacterized protein PRDX5; n=4;
           Homo/Pan/Gorilla group|Rep: Uncharacterized protein
           PRDX5 - Homo sapiens (Human)
          Length = 170

 Score = 35.9 bits (79), Expect = 1.00
 Identities = 16/24 (66%), Positives = 18/24 (75%)
 Frame = -1

Query: 716 DSKVQDXNVEPDGTGLSCSLADKI 645
           D  V+  NVEPDGTGL+CSLA  I
Sbjct: 143 DGIVKALNVEPDGTGLTCSLAPNI 166


>UniRef50_A6NC19 Cluster: Uncharacterized protein PRDX5; n=9;
           Coelomata|Rep: Uncharacterized protein PRDX5 - Homo
           sapiens (Human)
          Length = 125

 Score = 35.9 bits (79), Expect = 1.00
 Identities = 16/24 (66%), Positives = 18/24 (75%)
 Frame = -1

Query: 716 DSKVQDXNVEPDGTGLSCSLADKI 645
           D  V+  NVEPDGTGL+CSLA  I
Sbjct: 98  DGIVKALNVEPDGTGLTCSLAPNI 121


>UniRef50_P30044 Cluster: Peroxiredoxin-5, mitochondrial precursor;
           n=41; Eumetazoa|Rep: Peroxiredoxin-5, mitochondrial
           precursor - Homo sapiens (Human)
          Length = 214

 Score = 35.9 bits (79), Expect = 1.00
 Identities = 16/24 (66%), Positives = 18/24 (75%)
 Frame = -1

Query: 716 DSKVQDXNVEPDGTGLSCSLADKI 645
           D  V+  NVEPDGTGL+CSLA  I
Sbjct: 187 DGIVKALNVEPDGTGLTCSLAPNI 210


>UniRef50_Q6GPY3 Cluster: MGC82521 protein; n=2; Xenopus|Rep:
           MGC82521 protein - Xenopus laevis (African clawed frog)
          Length = 189

 Score = 35.5 bits (78), Expect = 1.3
 Identities = 15/24 (62%), Positives = 18/24 (75%)
 Frame = -1

Query: 716 DSKVQDXNVEPDGTGLSCSLADKI 645
           D K++  NVE DGTGL+CSLA  I
Sbjct: 162 DGKIKAINVEEDGTGLTCSLAGNI 185


>UniRef50_Q54YF4 Cluster: Putative uncharacterized protein; n=1;
           Dictyostelium discoideum AX4|Rep: Putative
           uncharacterized protein - Dictyostelium discoideum AX4
          Length = 660

 Score = 34.3 bits (75), Expect = 3.0
 Identities = 24/70 (34%), Positives = 34/70 (48%)
 Frame = +2

Query: 251 EVFNYINSKSKRSQTILFKSIVRCVRLFNSVALYVKLLS*QPKQINNMKTRINADFPTIF 430
           E++N I+  ++ S T   KS  + +  F S   +VKL+S       N K RI   F  I 
Sbjct: 137 EIYNEIDIYNENSTTTTTKSKKKKITTFQSGNYFVKLISIFKTLFKN-KRRILVGFLAIN 195

Query: 431 LAFRLY*VYN 460
           + F LY  YN
Sbjct: 196 IGFPLYLAYN 205


>UniRef50_Q23JX9 Cluster: Putative uncharacterized protein; n=1;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 534

 Score = 33.1 bits (72), Expect = 7.0
 Identities = 17/42 (40%), Positives = 25/42 (59%)
 Frame = -1

Query: 203 KFLSKLESFQNDVFHYSCNYEKRRKEPKQKKIFRATSRVSKI 78
           + +SKL + QND+  Y C YEK    P Q+  F+ TS ++ I
Sbjct: 67  QIISKLNT-QNDL--YQCEYEKNLTTPSQQSEFQMTSSINSI 105


>UniRef50_A2FZI4 Cluster: Putative uncharacterized protein; n=1;
            Trichomonas vaginalis G3|Rep: Putative uncharacterized
            protein - Trichomonas vaginalis G3
          Length = 1046

 Score = 33.1 bits (72), Expect = 7.0
 Identities = 19/65 (29%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
 Frame = -1

Query: 278  ICYLCN*KLRICIITFLLLHLISLVKFLSKLESFQNDVFHYS-CNYEKR--RKEPKQKKI 108
            I Y+C     IC+I  L+L++  +++  SK +     + HYS  N+ ++  +K+ ++K I
Sbjct: 958  IAYVCLFTPVICLIFKLILYIAFILEKKSKFDKLNRAIKHYSVANFRQKFTQKDEEEKHI 1017

Query: 107  FRATS 93
            F   S
Sbjct: 1018 FNPYS 1022


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 596,320,954
Number of Sequences: 1657284
Number of extensions: 10502302
Number of successful extensions: 22024
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 21361
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22018
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 57851245060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)