Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P17_pT_M12
(698 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC4.07c |rpt2|mts2|19S proteasome regulatory subunit Rpt2|Schi... 356 2e-99
SPBC23G7.12c |rpt6|let1|19S proteasome regulatory subunit Rpt6|S... 277 1e-75
SPCC576.10c |rpt3||19S proteasome regulatory subunit Rpt3|Schizo... 269 3e-73
SPAC3A11.12c |rpt5|pam2, tbp1|19S proteasome regulatory subunit ... 264 6e-72
SPBC16C6.07c |rpt1||19S proteasome regulatory subunit Rpt1|Schiz... 255 4e-69
SPCC1682.16 |rpt4||19S proteasome regulatory subunit Rpt4|Schizo... 244 1e-65
SPAC1565.08 |cdc48|SPAC6F12.01|AAA family ATPase Cdc48|Schizosac... 193 2e-50
SPBC543.09 |||mitochondrial m-AAA protease|Schizosaccharomyces p... 184 1e-47
SPBC56F2.07c |||AAA family ATPase, unknown biological role|Schiz... 183 2e-47
SPCC965.04c |||mitochondrial inner membrane i-AAA protease compl... 168 6e-43
SPBC16E9.10c |||AAA family ATPase Rix7 |Schizosaccharomyces pomb... 168 8e-43
SPAC31G5.19 |||ATPase with bromodomain protein|Schizosaccharomyc... 154 1e-38
SPBP22H7.05c |||ATPase with bromodomain protein|Schizosaccharomy... 154 1e-38
SPAC17A5.01 |pex6||peroxin-6 |Schizosaccharomyces pombe|chr 1|||... 146 4e-36
SPAC1834.11c |sec18||secretory pathway protein Sec18 |Schizosacc... 136 4e-33
SPAC2G11.06 |vps4||AAA family ATPase Vps4|Schizosaccharomyces po... 134 2e-32
SPCC553.03 |pex1||AAA family ATPase Pex1 |Schizosaccharomyces po... 127 1e-30
SPCC24B10.10c |||mitochondrial outer membrane ATPase Msp1 |Schiz... 121 9e-29
SPBC947.01 |||AAA family ATPase, unknown biological role|Schizos... 118 6e-28
SPAC328.04 |||AAA family ATPase, unknown biological role|Schizos... 109 4e-25
SPAC644.07 |||Rieske ISP assembly protein|Schizosaccharomyces po... 78 1e-15
SPAC22F3.06c |lon1||Lon protease homolog Lon1|Schizosaccharomyce... 42 1e-04
SPAPB8E5.09 |||AAA family ATPase Rvb1 |Schizosaccharomyces pombe... 33 0.039
SPBC16D10.08c |||heat shock protein Hsp104 |Schizosaccharomyces ... 32 0.091
SPAC26H5.02c |||DNA replication ATPase|Schizosaccharomyces pombe... 32 0.091
SPBC23E6.07c |rfc1||DNA replication factor C complex subunit Rfc... 31 0.12
SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual 31 0.16
SPBC31E1.06 |bms1|SPBC800.01|GTP binding protein Bms1|Schizosacc... 31 0.16
SPCC1442.07c |||ubiquitin/metalloprotease fusion protein|Schizos... 31 0.21
SPCC830.11c |||adenylate kinase |Schizosaccharomyces pombe|chr 3... 30 0.28
SPBC83.08 |||AAA family ATPase Rvb2 |Schizosaccharomyces pombe|c... 29 0.64
SPAC27E2.10c |rfc3|SPAPJ698.01c|DNA replication factor C complex... 29 0.85
SPAP11E10.02c |mam3|SPAPB1A10.01c|cell agglutination protein Mam... 28 1.1
SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr 1||... 28 1.1
SPBC4F6.17c |||mitochondrial matrix chaperone Hsp78 |Schizosacch... 28 1.1
SPAC4G9.12 |||gluconokinase|Schizosaccharomyces pombe|chr 1|||Ma... 28 1.5
SPBC115.02c |||AFG1 family mitochondrial ATPase|Schizosaccharomy... 27 2.0
SPAC8E11.10 |||sorbose reductase |Schizosaccharomyces pombe|chr ... 27 2.0
SPBPB10D8.02c |||arylsulfatase |Schizosaccharomyces pombe|chr 2|... 27 2.6
SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain |Schizosaccha... 27 3.4
SPAC1F3.09 |mug161||CwfJ family protein|Schizosaccharomyces pomb... 26 4.5
SPAC16C9.06c |upf1||ATP-dependent RNA helicase Upf1|Schizosaccha... 26 4.5
SPCC1919.11 |mug137||BAR adaptor protein|Schizosaccharomyces pom... 26 4.5
SPAC1952.10c |||conserved fungal protein |Schizosaccharomyces po... 26 6.0
SPBC15D4.10c |amo1||nuclear rim protein Amo1|Schizosaccharomyces... 26 6.0
SPCC737.07c |||DNA polymerase alpha-associated DNA helicase A |S... 25 7.9
SPBPB8B6.04c |grt1|SPAPB8B6.04c, SPAPB8B6.04c|transcription fact... 25 7.9
>SPBC4.07c |rpt2|mts2|19S proteasome regulatory subunit
Rpt2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 448
Score = 356 bits (875), Expect = 2e-99
Identities = 174/221 (78%), Positives = 193/221 (87%), Gaps = 1/221 (0%)
Frame = -1
Query: 698 THPEYYEXMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPK 519
THPE YE MGIKPPKGVILYG PGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGP+
Sbjct: 212 THPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPR 271
Query: 518 LVRELFRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFD-SRGD 342
LVR+LF AEEH+PSIVFIDEIDA+GTKRYD+ SG EREIQRTMLELLNQLDGFD S+ D
Sbjct: 272 LVRQLFNAAEEHSPSIVFIDEIDAIGTKRYDAQSGAEREIQRTMLELLNQLDGFDTSQRD 331
Query: 341 VKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFTIHTSRMTLADDVNLSELI 162
+KVIMATNRI LDPALIRPGRIDRKI F PDE TKR+IFTIHTS+M L +DVNL ELI
Sbjct: 332 IKVIMATNRISDLDPALIRPGRIDRKILFENPDEATKRKIFTIHTSKMNLGEDVNLEELI 391
Query: 161 MSKDXLXGADIKAICTEAGLMALRERRMKXTNED*QESKGK 39
KD L GA+IKAI +EAGL+ALRERRM+ +D ++++ K
Sbjct: 392 QCKDDLSGAEIKAIVSEAGLLALRERRMRVVMDDFRQAREK 432
>SPBC23G7.12c |rpt6|let1|19S proteasome regulatory subunit
Rpt6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 403
Score = 277 bits (679), Expect = 1e-75
Identities = 126/213 (59%), Positives = 165/213 (77%), Gaps = 1/213 (0%)
Frame = -1
Query: 695 HPEYYEXMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKL 516
HPE +E +GI PKG++LYGPPGTGKTLLA+AVA+ T F+RV GSEL+QKY+G+G ++
Sbjct: 167 HPELFESLGIPQPKGILLYGPPGTGKTLLARAVAHHTDCKFIRVSGSELVQKYIGEGSRM 226
Query: 515 VRELFRVAEEHAPSIVFIDEIDAVGTKRYDSNSG-GEREIQRTMLELLNQLDGFDSRGDV 339
VRELF +A EHAPSI+F+DEID++G+ R DS+ G G+ E+QRTMLELLNQLDGF++ ++
Sbjct: 227 VRELFVMAREHAPSIIFMDEIDSIGSSRSDSSGGSGDSEVQRTMLELLNQLDGFEATKNI 286
Query: 338 KVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFTIHTSRMTLADDVNLSELIM 159
KVIMATNRI+ LDPAL+RPGRIDRKIEFP P + + I IH+ M L ++L +
Sbjct: 287 KVIMATNRIDILDPALLRPGRIDRKIEFPPPSAEARAEILRIHSRSMNLTRGIDLKSIAE 346
Query: 158 SKDXLXGADIKAICTEAGLMALRERRMKXTNED 60
+ GA++K +CTEAG+ ALRERR+ T ED
Sbjct: 347 KMNGASGAELKGVCTEAGMFALRERRVHVTQED 379
>SPCC576.10c |rpt3||19S proteasome regulatory subunit
Rpt3|Schizosaccharomyces pombe|chr 3|||Manual
Length = 389
Score = 269 bits (659), Expect = 3e-73
Identities = 124/227 (54%), Positives = 171/227 (75%), Gaps = 1/227 (0%)
Frame = -1
Query: 698 THPEYYEXMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPK 519
T + Y +GI PP+GV+LYGPPGTGKT+L KAVAN T+A F+RVVGSE +QKYLG+GP+
Sbjct: 155 TQGDLYRQIGIDPPRGVLLYGPPGTGKTMLVKAVANSTAANFIRVVGSEFVQKYLGEGPR 214
Query: 518 LVRELFRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDV 339
+VR++FR+A E+AP+I+FIDEIDA+ TKR+D+ +G +RE+QR ++ELL Q+DGFD +V
Sbjct: 215 MVRDVFRMARENAPAIIFIDEIDAIATKRFDAQTGADREVQRILIELLTQMDGFDQGANV 274
Query: 338 KVIMATNRIETLDPALIRPGRIDRKIEFP-LPDEKTKRRIFTIHTSRMTLADDVNLSELI 162
KVIMATNR +TLDPAL+RPGR+DRKIEFP D + +R +F T++M L+ +V+L I
Sbjct: 275 KVIMATNRADTLDPALLRPGRLDRKIEFPSYRDRRQRRLVFQTITAKMLLSPEVDLDTFI 334
Query: 161 MSKDXLXGADIKAICTEAGLMALRERRMKXTNED*QESKGKWPRPXE 21
M D GA I AI +AGL+A+R+ R D +E+ + +P +
Sbjct: 335 MRPDASSGAQIAAIMQDAGLLAVRKSRGVILQSDIEEAYARAVKPTD 381
>SPAC3A11.12c |rpt5|pam2, tbp1|19S proteasome regulatory subunit
Rpt5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 438
Score = 264 bits (648), Expect = 6e-72
Identities = 117/207 (56%), Positives = 162/207 (78%)
Frame = -1
Query: 683 YEXMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVREL 504
+ +G+KPPKG +++GPPGTGKTLLA+A A Q++ATFL++ +L+Q ++GDG KLVR+
Sbjct: 211 FRKLGVKPPKGCLMFGPPGTGKTLLARACAAQSNATFLKLAAPQLVQMFIGDGAKLVRDA 270
Query: 503 FRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMA 324
F +A+E +P+I+FIDE+DA+GTKR+DS G+RE+QRTMLELLNQLDGF S VKVI A
Sbjct: 271 FALAKEKSPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFSSDDRVKVIAA 330
Query: 323 TNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFTIHTSRMTLADDVNLSELIMSKDXL 144
TNR++TLDPAL+R GR+DRK+EFPLP+E+ + I IH+ +M + DD+N EL S D
Sbjct: 331 TNRVDTLDPALLRSGRLDRKLEFPLPNEEARVGILRIHSRKMAIDDDINWEELARSTDEY 390
Query: 143 XGADIKAICTEAGLMALRERRMKXTNE 63
GA +K++C EAG++ALR+ K +E
Sbjct: 391 NGAMLKSVCVEAGMIALRQGDTKINHE 417
>SPBC16C6.07c |rpt1||19S proteasome regulatory subunit
Rpt1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 438
Score = 255 bits (625), Expect = 4e-69
Identities = 115/211 (54%), Positives = 154/211 (72%)
Frame = -1
Query: 692 PEYYEXMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLV 513
PE + +GI PPKG++LYGPPGTGKTL A+AVAN+T ATF+RV+GSEL+QKY+G+G ++V
Sbjct: 202 PERFVKLGIDPPKGIMLYGPPGTGKTLCARAVANRTDATFIRVIGSELVQKYVGEGARMV 261
Query: 512 RELFRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKV 333
RELF +A I+F DEIDA+G R+D +GG+ E+QRTMLEL+ QLDGFD RG++KV
Sbjct: 262 RELFEMARTKKACIIFFDEIDAIGGARFDDGAGGDNEVQRTMLELITQLDGFDPRGNIKV 321
Query: 332 IMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFTIHTSRMTLADDVNLSELIMSK 153
+ ATNR TLD AL+RPGRIDRK+EF LPD + + I IH M + D+ +
Sbjct: 322 LFATNRPNTLDEALMRPGRIDRKVEFGLPDLEGRAHILRIHAKSMAIDKDIRWELIARLC 381
Query: 152 DXLXGADIKAICTEAGLMALRERRMKXTNED 60
GA+++++CTEAG+ A+R RR T +D
Sbjct: 382 PSQTGAELRSVCTEAGMFAIRARRRVATEKD 412
>SPCC1682.16 |rpt4||19S proteasome regulatory subunit
Rpt4|Schizosaccharomyces pombe|chr 3|||Manual
Length = 388
Score = 244 bits (596), Expect = 1e-65
Identities = 106/205 (51%), Positives = 151/205 (73%)
Frame = -1
Query: 695 HPEYYEXMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKL 516
+PE + +GIKPPKGV+LYGPPGTGKTLLA+AVA FL+VV S ++ KY+G+ ++
Sbjct: 154 NPELFLRVGIKPPKGVLLYGPPGTGKTLLARAVAASLGVNFLKVVSSAIVDKYIGESARI 213
Query: 515 VRELFRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVK 336
+RE+F A+EH P ++F+DEIDA+G +R+ + +REIQRT++ELLNQ+DGFD G K
Sbjct: 214 IREMFGYAKEHEPCVIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDYLGQTK 273
Query: 335 VIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFTIHTSRMTLADDVNLSELIMS 156
+IMATNR +TLDPAL+RPGR+DRKIE PLP+E + I IH +++ +++ L+
Sbjct: 274 IIMATNRPDTLDPALLRPGRLDRKIEIPLPNEVGRMEILKIHLEKVSKQGEIDYEALVKL 333
Query: 155 KDXLXGADIKAICTEAGLMALRERR 81
D GAD++ + TEAG +A++E R
Sbjct: 334 TDGTNGADLRNVVTEAGFIAIKEDR 358
>SPAC1565.08 |cdc48|SPAC6F12.01|AAA family ATPase
Cdc48|Schizosaccharomyces pombe|chr 1|||Manual
Length = 815
Score = 193 bits (470), Expect = 2e-50
Identities = 89/204 (43%), Positives = 139/204 (68%)
Frame = -1
Query: 695 HPEYYEXMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKL 516
HP+ ++ +GIKPP+G+++YGPPGTGKTL+A+AVAN+T A F + G E++ K G+
Sbjct: 246 HPQLFKSIGIKPPRGILMYGPPGTGKTLMARAVANETGAFFFLINGPEIMSKMAGESESN 305
Query: 515 VRELFRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVK 336
+R+ F AE+++P+I+FIDEID++ KR +N GE E +R + +LL +DG +R +V
Sbjct: 306 LRKAFEEAEKNSPAIIFIDEIDSIAPKREKTN--GEVE-RRVVSQLLTLMDGMKARSNVV 362
Query: 335 VIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFTIHTSRMTLADDVNLSELIMS 156
V+ ATNR ++DPAL R GR DR+++ +PD + I IHT M LADDV+L ++
Sbjct: 363 VMAATNRPNSIDPALRRFGRFDREVDVGIPDPTGRLEILRIHTKNMKLADDVDLEQIAAE 422
Query: 155 KDXLXGADIKAICTEAGLMALRER 84
G+D+ ++C+EA + +RE+
Sbjct: 423 THGYVGSDLASLCSEAAMQQIREK 446
Score = 163 bits (397), Expect = 2e-41
Identities = 84/214 (39%), Positives = 131/214 (61%), Gaps = 3/214 (1%)
Frame = -1
Query: 695 HPEYYEXMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKL 516
+ E + G+ P KGV+ +GPPGTGKTLLAKA+AN+ SA F+ V G EL+ + G+
Sbjct: 519 YAEKFLRFGVTPSKGVLFFGPPGTGKTLLAKAIANECSANFISVKGPELLSMWFGESESN 578
Query: 515 VRELFRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVK 336
VR++F A AP +VF+DE+D++ R +++G R + +LL ++DG +S+ +V
Sbjct: 579 VRDIFDKARAAAPCVVFLDELDSIAKAR-GASAGDSGGGDRVVNQLLTEMDGVNSKKNVF 637
Query: 335 VIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFTIHTSRMTLADDVNLSELIMS 156
VI ATNR + +DPAL+RPGR+D+ I PLPDE+ + I +A+DV+L + +
Sbjct: 638 VIGATNRPDQIDPALMRPGRLDQLIYVPLPDEEARFSILQTQLRHTPVAEDVDLRAVAKA 697
Query: 155 KDXLXGADIKAICTEAGLMALR---ERRMKXTNE 63
GAD++ + A +A++ E +K NE
Sbjct: 698 THGFSGADLEFVVQRAVKLAIKDSIEEDIKRENE 731
>SPBC543.09 |||mitochondrial m-AAA protease|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 773
Score = 184 bits (447), Expect = 1e-47
Identities = 92/205 (44%), Positives = 127/205 (61%), Gaps = 3/205 (1%)
Frame = -1
Query: 695 HPEYYEXMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKL 516
+P++YE +G K P+G IL GPPGTGKTLLAKA A + + FL V GSE ++ ++G GP
Sbjct: 317 NPKFYERLGAKIPRGAILSGPPGTGKTLLAKATAGEANVPFLSVSGSEFLEMFVGVGPSR 376
Query: 515 VRELFRVAEEHAPSIVFIDEIDAVGTKR-YDSNSGGEREIQRTMLELLNQLDGFDSRGDV 339
VR+LF A ++AP I+FIDEIDA+G R G E + T+ +LL ++DGF S +
Sbjct: 377 VRDLFATARKNAPCIIFIDEIDAIGKARGRGGQFGSNDERESTLNQLLVEMDGFTSSEHI 436
Query: 338 KVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFTIHTSRMTLADDVNL--SEL 165
V TNR + LDPAL+RPGR DR+I PD + +IF +H + AD+++L L
Sbjct: 437 VVFAGTNRPDVLDPALLRPGRFDRQITIDRPDIGGREQIFKVHLKHIKAADNIDLIAKRL 496
Query: 164 IMSKDXLXGADIKAICTEAGLMALR 90
+ GADI +C E L+A R
Sbjct: 497 AVLTSGFTGADIMNVCNEGALIAAR 521
>SPBC56F2.07c |||AAA family ATPase, unknown biological
role|Schizosaccharomyces pombe|chr 2|||Manual
Length = 809
Score = 183 bits (446), Expect = 2e-47
Identities = 85/204 (41%), Positives = 133/204 (65%)
Frame = -1
Query: 698 THPEYYEXMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPK 519
TH E + +G++PPKGV+LYGPPG KT+ AKA+A +T F+ V G EL K++G+ +
Sbjct: 569 THGETFSRLGVRPPKGVLLYGPPGCSKTITAKAIATETGLNFIAVKGPELFDKFVGESER 628
Query: 518 LVRELFRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDV 339
VR++F+ A + +PS++F DEIDA+ R + NS R + LLN+LDG ++ +V
Sbjct: 629 AVRQVFQKARQASPSVIFFDEIDALTANRGEDNSS-----DRVVAALLNELDGIEALRNV 683
Query: 338 KVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFTIHTSRMTLADDVNLSELIM 159
V+ ATNR + +DPAL+RPGR+DR + P+ + +++I I +M A+DV+L +
Sbjct: 684 LVLAATNRPDMIDPALMRPGRLDRLLYVGPPNFEARKQIVKIQAEKMKFAEDVDLDLIAE 743
Query: 158 SKDXLXGADIKAICTEAGLMALRE 87
+ GA++ A+C EAGL+A+ E
Sbjct: 744 KTEGCSGAEVVALCQEAGLIAMHE 767
Score = 157 bits (381), Expect = 1e-39
Identities = 82/203 (40%), Positives = 121/203 (59%), Gaps = 1/203 (0%)
Frame = -1
Query: 695 HPEYYEXMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKL 516
+PE ++ I PP+GV+LYGPPGTGKT++ +AVA + +A + G ++ KYLG+
Sbjct: 301 NPELFKFFNIMPPRGVLLYGPPGTGKTMVMRAVAAEANAQVFTIDGPSVVGKYLGETESR 360
Query: 515 VRELFRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVK 336
+R++F A H PSI+FIDEIDA+ KR + S E R + LL LDG + G V
Sbjct: 361 LRKIFEDARAHQPSIIFIDEIDALAPKRTEDVSEAE---SRAVATLLTLLDGMANAGKVV 417
Query: 335 VIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFTIHTSRM-TLADDVNLSELIM 159
VI ATNR ++D AL RPGR++++IE +PD+ + I + S + +D L +L
Sbjct: 418 VIAATNRPNSIDEALRRPGRLEKEIEIGIPDKSARLDIIKLLLSGVPNEINDAQLEDLAS 477
Query: 158 SKDXLXGADIKAICTEAGLMALR 90
GAD+ A+ EA L A++
Sbjct: 478 RTHAYVGADLAAVVREAALRAIK 500
>SPCC965.04c |||mitochondrial inner membrane i-AAA protease complex
subunit Yme1 |Schizosaccharomyces pombe|chr 3|||Manual
Length = 709
Score = 168 bits (409), Expect = 6e-43
Identities = 93/222 (41%), Positives = 130/222 (58%), Gaps = 4/222 (1%)
Frame = -1
Query: 692 PEYYEXMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLV 513
P ++ +G K P+GV+L GPPGTGKT+LA+AVA + + F + GS+ + Y+G G K V
Sbjct: 289 PTHFTRLGGKLPRGVLLTGPPGTGKTMLARAVAGEANVPFFFMSGSQFDEMYVGVGAKRV 348
Query: 512 RELFRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGD--- 342
RELF A + APSI+FIDE+DA+G KR N+ +++T+ +LL LDGF D
Sbjct: 349 RELFAAARKQAPSIIFIDELDAIGQKR---NARDAAHMRQTLNQLLVDLDGFSKNEDLAH 405
Query: 341 -VKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFTIHTSRMTLADDVNLSEL 165
V I ATN E+LDPAL RPGR DR I PLPD + + I HT + L DV+LS +
Sbjct: 406 PVVFIGATNFPESLDPALTRPGRFDRHIHVPLPDVRGRLAILLQHTRHVPLGKDVDLSII 465
Query: 164 IMSKDXLXGADIKAICTEAGLMALRERRMKXTNED*QESKGK 39
GAD+ + +A + A + + D + SK +
Sbjct: 466 ARGTSGFAGADLANLINQAAVYASKNLSTAVSMRDLEWSKDR 507
>SPBC16E9.10c |||AAA family ATPase Rix7 |Schizosaccharomyces pombe|chr
2|||Manual
Length = 779
Score = 168 bits (408), Expect = 8e-43
Identities = 87/203 (42%), Positives = 124/203 (61%), Gaps = 2/203 (0%)
Frame = -1
Query: 692 PEYYEXMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLV 513
PE Y+ +GI P GV+L+GPPG GKTLLAKAVAN++ A F+ + G EL+ KY+G+ + V
Sbjct: 515 PELYQSVGISAPTGVLLWGPPGCGKTLLAKAVANESKANFISIRGPELLNKYVGESERAV 574
Query: 512 RELFRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKV 333
R++F A +P ++F DE+DA+ +R DS S + T LL +LDG R V V
Sbjct: 575 RQVFLRARASSPCVIFFDELDAMVPRRDDSLSEASSRVVNT---LLTELDGLSDRSGVYV 631
Query: 332 IMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFTIHTSRMTLADDVNLSELIMSK 153
I ATNR + +DPA++RPGR+D+ + LPD + I T + L ++VNL L +
Sbjct: 632 IAATNRPDIIDPAMLRPGRLDKTLLVDLPDAHERVEILKTLTKQTPLHEEVNLDVLGRDE 691
Query: 152 --DXLXGADIKAICTEAGLMALR 90
GAD+ A+ EA + ALR
Sbjct: 692 RCSNFSGADLAALVREAAVTALR 714
Score = 151 bits (367), Expect = 7e-38
Identities = 79/203 (38%), Positives = 117/203 (57%), Gaps = 1/203 (0%)
Frame = -1
Query: 695 HPEYYEXMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKL 516
HPE Y+ GI PP+GV+L+GPPG GKT+LA A+AN+ F+ + ++ G+ K
Sbjct: 196 HPEVYQYTGIHPPRGVLLHGPPGCGKTMLANALANELGVPFISISAPSIVSGMSGESEKK 255
Query: 515 VRELFRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRG-DV 339
VRE+F A+ AP ++FIDEIDAV KR + ER I L +++L + G V
Sbjct: 256 VREVFEEAKSLAPCLMFIDEIDAVTPKRESAQREMERRIVAQFLTCMDELSFEKTDGKPV 315
Query: 338 KVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFTIHTSRMTLADDVNLSELIM 159
VI ATNR ++LD AL R GR DR+I +P + + +I + L+ D + +L
Sbjct: 316 LVIGATNRPDSLDSALRRAGRFDREICLTVPSQDAREKILRTMAKGLKLSGDFDFRQLAK 375
Query: 158 SKDXLXGADIKAICTEAGLMALR 90
GAD+KA+ AG++A++
Sbjct: 376 QTPGYVGADLKALTAAAGIIAIK 398
>SPAC31G5.19 |||ATPase with bromodomain protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1190
Score = 154 bits (374), Expect = 1e-38
Identities = 81/208 (38%), Positives = 123/208 (59%), Gaps = 6/208 (2%)
Frame = -1
Query: 695 HPEYYEXMGIKPPKGVILYGPPGTGKTLLAKAVANQTSA-----TFLRVVGSELIQKYLG 531
+PE ++ ++PP+GV+ +GPPGTGKTL+A+A+A S+ +F G++ + K++G
Sbjct: 288 YPEIFQRFNMQPPRGVLFHGPPGTGKTLMARALAAACSSENKKVSFYMRKGADCLSKWVG 347
Query: 530 DGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDS 351
+ + +R LF A+ PSI+F DEID + R I T+L L+ DG +S
Sbjct: 348 EAERQLRLLFEEAKSTQPSIIFFDEIDGLAPVRSSKQEQIHASIVSTLLALM---DGMES 404
Query: 350 RGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFTIHTSRMTLADDVNLS 171
RG V +I ATNR + +DPAL RPGR DR+ FPLPD +++I IHT L
Sbjct: 405 RGQVIIIGATNRPDAVDPALRRPGRFDREFYFPLPDRDARKKIIEIHTRNWDPPVPEWLC 464
Query: 170 ELIMSKD-XLXGADIKAICTEAGLMALR 90
++ K GAD++A+CTEA L +++
Sbjct: 465 SMLAEKSKGYGGADLRALCTEAALNSIK 492
Score = 35.1 bits (77), Expect = 0.010
Identities = 24/81 (29%), Positives = 37/81 (45%), Gaps = 1/81 (1%)
Frame = -1
Query: 689 EYYEXMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVG-SELIQKYLGDGPKLV 513
E +E + I P+ +I G G G+T L A+ Q ++ S L+Q +
Sbjct: 593 ETFETLRIYKPRFLIC-GRKGLGQTALGPAILQQYEGVHVQSFDMSTLLQDSTQSIETSI 651
Query: 512 RELFRVAEEHAPSIVFIDEID 450
LF H PSI++I +ID
Sbjct: 652 IHLFLEVRRHTPSIIYIPDID 672
>SPBP22H7.05c |||ATPase with bromodomain protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1201
Score = 154 bits (374), Expect = 1e-38
Identities = 88/209 (42%), Positives = 123/209 (58%), Gaps = 7/209 (3%)
Frame = -1
Query: 695 HPEYYEXMGIKPPKGVILYGPPGTGKTLLAKAVA------NQTSATFLRVVGSELIQKYL 534
+PE + + I PP+GV+ +GPPGTGKTL+A+ +A NQ + FLR GS+ + K++
Sbjct: 394 YPEVFLHLHITPPRGVLFHGPPGTGKTLMARVLAANCSTKNQKISFFLRK-GSDCLSKWV 452
Query: 533 GDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFD 354
G+ + +R LF A PSI+F DEID + R I T+L L+ DG D
Sbjct: 453 GEAERQLRLLFEEARRVQPSIIFFDEIDGLAPIRSSKQEQTHSSIVSTLLALM---DGLD 509
Query: 353 SRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFTIHTSRMT-LADDVN 177
+RG V VI ATNR LDPAL RPGR DR+ FPLP+++ + +I I++ + +
Sbjct: 510 TRGQVVVIGATNRPNDLDPALRRPGRFDREFYFPLPNKQARMKILEINSLHFSPKIPESY 569
Query: 176 LSELIMSKDXLXGADIKAICTEAGLMALR 90
L L S GAD+KA+CTEA L A+R
Sbjct: 570 LLHLAESTSGYGGADLKALCTEAALNAVR 598
Score = 30.7 bits (66), Expect = 0.21
Identities = 17/61 (27%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Frame = -1
Query: 629 GTGKTLLAKAVANQTSATFLRVVG-SELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEI 453
G G T L+K + + ++ + SEL+ L+ ++F A ++APSI+FI+ +
Sbjct: 716 GYGCTYLSKVLFSMLDGIHVQSLDISELLMDTTTSPRSLLTKIFSEARKNAPSIIFINNV 775
Query: 452 D 450
+
Sbjct: 776 E 776
>SPAC17A5.01 |pex6||peroxin-6 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 948
Score = 146 bits (353), Expect = 4e-36
Identities = 79/207 (38%), Positives = 124/207 (59%), Gaps = 4/207 (1%)
Frame = -1
Query: 692 PEYYEXMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLV 513
PE + G+KP GV+LYGPPGTGKTLLAKAVA + S F+ + G EL+ Y+G+ V
Sbjct: 678 PELFS-QGLKPRSGVLLYGPPGTGKTLLAKAVATELSLEFVSIKGPELLNMYVGESEANV 736
Query: 512 RELFRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGF--DSRGDV 339
R +F A +P ++F DE+D++ R +S+ G + R + +LL +LD D+ V
Sbjct: 737 RNVFEKARNSSPCVIFFDELDSIAPHRGNSSDSG-NVMDRVVSQLLAELDSISKDNNKYV 795
Query: 338 KVIMATNRIETLDPALIRPGRIDRKIEFPL-PDEKTKRRIFTIHTSRMTLADDVNLSELI 162
VI ATNR + LDP+L+RPGR D+ + + E++K + T L + ++L+E+
Sbjct: 796 FVIGATNRPDLLDPSLLRPGRFDKLVYLGINKSEESKASMLRALTKTFKLDETIDLNEIA 855
Query: 161 MS-KDXLXGADIKAICTEAGLMALRER 84
+ GAD+ A+C++A L A++ +
Sbjct: 856 KNCHPNFTGADMYALCSDAVLSAIKRK 882
Score = 31.5 bits (68), Expect = 0.12
Identities = 41/199 (20%), Positives = 86/199 (43%), Gaps = 3/199 (1%)
Frame = -1
Query: 647 ILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAP-SI 471
+L+G P TGKT + VA+ SA + E D + ++F +P +I
Sbjct: 426 LLHGNPFTGKTKAVEEVASLFSAPVFTISSYEFADA-TADHLEAKLDMFVQNVVKSPCAI 484
Query: 470 VFIDEIDAVGTKRYDSN-SGGEREIQRTMLELLNQLDGFDS-RGDVKVIMATNRIETLDP 297
+F+ ++D + + N G + IQ LL+++D S +G VI + IE +
Sbjct: 485 IFVKDLDVLSISSDEGNIVPGSKSIQ----ILLSKIDLVKSPQGRYIVIGTCHSIEKIPY 540
Query: 296 ALIRPGRIDRKIEFPLPDEKTKRRIFTIHTSRMTLADDVNLSELIMSKDXLXGADIKAIC 117
++ + K DE+ + + I+ + + + ++L ++ + + + +++ C
Sbjct: 541 EILSESFFELKFSELEMDERLE--LLKIYANNVIIDKRISLKDVALKTNSMSFGELE--C 596
Query: 116 TEAGLMALRERRMKXTNED 60
+ R+K T D
Sbjct: 597 LPDHMTKAAVDRIKRTGYD 615
>SPAC1834.11c |sec18||secretory pathway protein Sec18
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 792
Score = 136 bits (328), Expect = 4e-33
Identities = 81/213 (38%), Positives = 121/213 (56%), Gaps = 14/213 (6%)
Frame = -1
Query: 692 PEYYEXMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVV-GSELIQKYLGDGPKL 516
P E +GI KG++LYGPPGTGKTL+A+ + +A ++V G E++ KY+G +
Sbjct: 293 PGMVEKLGINHVKGILLYGPPGTGKTLIARQIGKMLNAREPKIVNGPEILNKYVGQSEEN 352
Query: 515 VRELFRVAE--------EHAPSIVFIDEIDAVGTKRYDSNSGGEREI-QRTMLELLNQLD 363
VR+LF AE E I+ DE+DA+ KR +SGG+ + + + +LL ++D
Sbjct: 353 VRKLFADAEREYRDRGEESGLHIIIFDELDAICKKR--GSSGGDTGVGDQVVNQLLAKMD 410
Query: 362 GFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFTIHTSRMT---- 195
G D ++ VI TNR + +D AL+RPGR++ +E LPDE + +I IHTSRM
Sbjct: 411 GVDQLNNILVIGMTNRKDMIDEALLRPGRLEVHMEISLPDEHGRLQILKIHTSRMASNGI 470
Query: 194 LADDVNLSELIMSKDXLXGADIKAICTEAGLMA 96
L +DV++ EL GA+I + A A
Sbjct: 471 LENDVDMEELASLTKNFSGAEIAGLIKSASSFA 503
>SPAC2G11.06 |vps4||AAA family ATPase Vps4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 432
Score = 134 bits (323), Expect = 2e-32
Identities = 75/195 (38%), Positives = 115/195 (58%), Gaps = 1/195 (0%)
Frame = -1
Query: 671 GIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVA 492
G KP G++LYGPPGTGK+ LAKAVA + +TF + S+L+ K++G+ +LVR+LF +A
Sbjct: 158 GRKPWSGILLYGPPGTGKSYLAKAVATEAGSTFFSISSSDLVSKWMGESERLVRQLFEMA 217
Query: 491 EEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRI 312
E PSI+FIDEID++ R + S R I+ L +N + G D G V V+ ATN
Sbjct: 218 REQKPSIIFIDEIDSLCGSRSEGESESSRRIKTEFLVQMNGV-GKDESG-VLVLGATNIP 275
Query: 311 ETLDPALIRPGRIDRKIEFPLPDEKTKRRIFTIHTSRM-TLADDVNLSELIMSKDXLXGA 135
TLD A+ R R +++I PLP+ + R+F ++ ++ + + EL D G+
Sbjct: 276 WTLDSAIRR--RFEKRIYIPLPNAHARARMFELNVGKIPSELTSQDFKELAKMTDGYSGS 333
Query: 134 DIKAICTEAGLMALR 90
DI + +A + +R
Sbjct: 334 DISIVVRDAIMEPVR 348
>SPCC553.03 |pex1||AAA family ATPase Pex1 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 937
Score = 127 bits (307), Expect = 1e-30
Identities = 65/199 (32%), Positives = 114/199 (57%)
Frame = -1
Query: 683 YEXMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVREL 504
Y+ ++ P G++L+G PG GKT LA A+++ F+ + G EL+ KY+G + VR+L
Sbjct: 632 YKQCRLRLPTGILLFGYPGCGKTYLASAISSTFPVQFISIKGPELLDKYIGKSEQGVRDL 691
Query: 503 FRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMA 324
F A+ P ++F DE D+V +R ++G R + ++L Q+DG +S V ++ A
Sbjct: 692 FSRAQMAKPCVLFFDEFDSVAPRRGQDSTG---VTDRVVNQILTQMDGAESLDGVYIVAA 748
Query: 323 TNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFTIHTSRMTLADDVNLSELIMSKDXL 144
T R + +DPAL+RPGR+D+ I LP+E+ + + +R + + L +L D
Sbjct: 749 TTRPDMIDPALLRPGRLDKLIFCDLPNEEERLEVLQKLANRFHIENAAMLKKLSTLTDGY 808
Query: 143 XGADIKAICTEAGLMALRE 87
AD+ ++ +A L+A+ +
Sbjct: 809 TYADLSSLLYDAHLIAVHK 827
>SPCC24B10.10c |||mitochondrial outer membrane ATPase Msp1
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 355
Score = 121 bits (292), Expect = 9e-29
Identities = 73/213 (34%), Positives = 120/213 (56%), Gaps = 2/213 (0%)
Frame = -1
Query: 695 HPEYYEXMG--IKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGP 522
+PE ++ G + PKG++LYGPPG GKT+LAKA+A Q+ ATF+ V L K+ G+
Sbjct: 111 YPEVFDTHGGLLSCPKGLLLYGPPGCGKTMLAKALAKQSQATFINVSVGLLTDKWFGESN 170
Query: 521 KLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGD 342
KLV LF +A + P+I+FIDEID +R ++ +I+ + + + L SR
Sbjct: 171 KLVDALFTLARKLEPTIIFIDEIDTFLRQRQRTDHEAMAQIKAEFMSMWDGLLSGQSR-- 228
Query: 341 VKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFTIHTSRMTLADDVNLSELI 162
V V+ ATNR +D A+ R R+ + PLP+ + +R+I ++ ++ L + + + ++
Sbjct: 229 VLVLGATNRPADIDEAIRR--RMPKVFSIPLPNAEQRRKILELYLKKVPLEANFDWNGVV 286
Query: 161 MSKDXLXGADIKAICTEAGLMALRERRMKXTNE 63
+ L G+ IK +C A + RE K N+
Sbjct: 287 NATAGLSGSYIKEVCRSALSVPRRELFDKHGND 319
>SPBC947.01 |||AAA family ATPase, unknown biological
role|Schizosaccharomyces pombe|chr 2|||Manual
Length = 660
Score = 118 bits (285), Expect = 6e-28
Identities = 77/213 (36%), Positives = 118/213 (55%), Gaps = 12/213 (5%)
Frame = -1
Query: 692 PEYYEXMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLV 513
PE ++ + +P +G++L+GPPGTGKT+LA+AVA + ATF + S L KYLGD KLV
Sbjct: 402 PELFQGLR-EPVQGMLLFGPPGTGKTMLARAVATEAKATFFSISASSLTSKYLGDSEKLV 460
Query: 512 RELFRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTM-LELLNQLDGFDSRGD-- 342
R LF VA+ S++F+DEID++ + R D SG E E R + E L Q +
Sbjct: 461 RALFEVAKRQTCSVIFVDEIDSILSARND--SGNEHESSRRLKTEFLIQWSSLTNAAPDK 518
Query: 341 -------VKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFT--IHTSRMTLA 189
V V+ ATN +D A R R ++ PLP+++T+ + + +H L
Sbjct: 519 QTGHSPRVLVLAATNLPWCIDEAARR--RFVKRTYIPLPEKETRYKHLSHLLHNQVHCLT 576
Query: 188 DDVNLSELIMSKDXLXGADIKAICTEAGLMALR 90
++ +L EL+ + G+DI A+ +A + LR
Sbjct: 577 EE-DLEELVNLTEGYSGSDITALAKDAAMGPLR 608
>SPAC328.04 |||AAA family ATPase, unknown biological
role|Schizosaccharomyces pombe|chr 1|||Manual
Length = 741
Score = 109 bits (262), Expect = 4e-25
Identities = 74/215 (34%), Positives = 119/215 (55%), Gaps = 14/215 (6%)
Frame = -1
Query: 692 PEYYEXMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLV 513
P+ ++ + +P +G++L+GPPGTGKT+LA+AVA ++ + F + S L K+LG+ KLV
Sbjct: 482 PDLFQGLR-EPARGMLLFGPPGTGKTMLARAVATESRSVFFSISASSLTSKFLGESEKLV 540
Query: 512 RELFRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTM-LELLNQLDGF----DSR 348
R LF +A++ +PSI+F+DEID++ + R S+ G E E R + E L Q SR
Sbjct: 541 RALFTLAKKLSPSIIFVDEIDSLLSAR--SSDGNEHETSRRIKTEFLIQWSSLARAAASR 598
Query: 347 GD-----VKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKR----RIFTIHTSRMT 195
V V+ ATN +D A R R R+ PLPDE T+R + ++
Sbjct: 599 QTADHPRVLVLAATNLPWCIDDAARR--RFVRRTYIPLPDETTRRLHLNNLLKYQKHSLS 656
Query: 194 LADDVNLSELIMSKDXLXGADIKAICTEAGLMALR 90
L D + ++ + + G+D+ A+ +A + LR
Sbjct: 657 LED---IEAIVKATEYYSGSDLTALAKDAAMGPLR 688
>SPAC644.07 |||Rieske ISP assembly protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 449
Score = 77.8 bits (183), Expect = 1e-15
Identities = 59/181 (32%), Positives = 90/181 (49%), Gaps = 1/181 (0%)
Frame = -1
Query: 689 EYYEXMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVR 510
++Y+ GI +G +LYGPPG+GKT A+A + + L +K L D +L
Sbjct: 232 QWYDTRGIPYRRGYLLYGPPGSGKTSFLYALAGELDYDICVL---NLAEKGLTDD-RLNH 287
Query: 509 ELFRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVI 330
L V + ++V ++++D+ R S G T LLN LDG S + +
Sbjct: 288 LLSNVPPK---AVVLLEDVDSAFQGRERSGEVGFHA-NVTFSGLLNALDGVTSSDERIIF 343
Query: 329 MATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFT-IHTSRMTLADDVNLSELIMSK 153
M TN E LDPAL+RPGR+D K + R +FT + +ADD LS+++ K
Sbjct: 344 MTTNHPEKLDPALVRPGRVDVKAYLGNATPEQVREMFTRFYGHSPEMADD--LSDIVCPK 401
Query: 152 D 150
+
Sbjct: 402 N 402
>SPAC22F3.06c |lon1||Lon protease homolog Lon1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1067
Score = 41.5 bits (93), Expect = 1e-04
Identities = 41/141 (29%), Positives = 66/141 (46%), Gaps = 13/141 (9%)
Frame = -1
Query: 671 GIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRV-VG-----SEL---IQKYLGDGP- 522
G K + L GPPG GKT + K++A+ + F R VG +E+ + Y+G P
Sbjct: 567 GTMQGKIMCLVGPPGVGKTSVGKSIASALNREFFRFSVGGLTDVAEIKGHRRTYIGAMPG 626
Query: 521 KLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREI---QRTMLELLNQLDGFDS 351
K+V+ L +V E+ ++ IDEID VG + E+ ++ L +D
Sbjct: 627 KIVQALKKVQTEN--PLILIDEIDKVGKSHQGDPASALLELLDSEQNSAFLDYYMDIPLD 684
Query: 350 RGDVKVIMATNRIETLDPALI 288
V + N I+T+ P L+
Sbjct: 685 VSSVLFVCTANTIDTIPPPLL 705
>SPAPB8E5.09 |||AAA family ATPase Rvb1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 456
Score = 33.1 bits (72), Expect = 0.039
Identities = 18/38 (47%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Frame = -1
Query: 656 KGVILYGPPGTGKTLLAKAVANQ--TSATFLRVVGSEL 549
KGV+ G GTGKT LA A+A + F +VGSE+
Sbjct: 65 KGVLFAGGAGTGKTALALAIAQELGPKVPFCPMVGSEV 102
>SPBC16D10.08c |||heat shock protein Hsp104 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 905
Score = 31.9 bits (69), Expect = 0.091
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 3/46 (6%)
Frame = -1
Query: 665 KPPKGVILYGPPGTGKTLLAKAVAN---QTSATFLRVVGSELIQKY 537
+P + GP GTGKTLL KA+A+ +R+ SE ++K+
Sbjct: 612 QPIASFLFCGPSGTGKTLLTKALASFMFDDENAMIRIDMSEYMEKH 657
Score = 31.5 bits (68), Expect = 0.12
Identities = 35/126 (27%), Positives = 59/126 (46%), Gaps = 13/126 (10%)
Frame = -1
Query: 647 ILYGPPGTGKTLLAKAV----------ANQTSATFLRV-VGSELI-QKYLGDGPKLVREL 504
+L G PG GKT +A+ + AN ++ L + VGS + K+ G+ + ++ +
Sbjct: 206 VLIGEPGVGKTSIAEGLARRIIDDDVPANLSNCKLLSLDVGSLVAGSKFRGEFEERIKSV 265
Query: 503 FR-VAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIM 327
+ V E P I+F+DE+ + + SGGE ++ N L +RG + I
Sbjct: 266 LKEVEESETPIILFVDEMHLL----MGAGSGGEGG-----MDAANLLKPMLARGKLHCIG 316
Query: 326 ATNRIE 309
AT E
Sbjct: 317 ATTLAE 322
>SPAC26H5.02c |||DNA replication ATPase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 504
Score = 31.9 bits (69), Expect = 0.091
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = -1
Query: 650 VILYGPPGTGKTLLAKAVANQTSATFLRV 564
+IL+G GTGKT LA+ +A T + F+ +
Sbjct: 123 MILWGSAGTGKTTLARLIAVTTKSRFIEI 151
>SPBC23E6.07c |rfc1||DNA replication factor C complex subunit
Rfc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 934
Score = 31.5 bits (68), Expect = 0.12
Identities = 18/43 (41%), Positives = 21/43 (48%)
Frame = -1
Query: 656 KGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGD 528
K V+L GPPG GKT A VA L + S+ K L D
Sbjct: 410 KAVLLSGPPGIGKTTAAHLVAKLEGYDVLELNASDTRSKRLLD 452
>SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 4717
Score = 31.1 bits (67), Expect = 0.16
Identities = 14/42 (33%), Positives = 26/42 (61%), Gaps = 2/42 (4%)
Frame = -1
Query: 650 VILYGPPGTGKTLLAKAVANQTSATFLRVVGSEL--IQKYLG 531
+++ GP +GKT + + VA +T F+R+ E +Q+Y+G
Sbjct: 897 ILIQGPTSSGKTSMIEYVAKKTGHKFVRINNHEHTDLQEYIG 938
Score = 30.7 bits (66), Expect = 0.21
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = -1
Query: 656 KGVILYGPPGTGKTLLAKAVANQTSATFLRV 564
K ++L G PG GKT L A+A +T +R+
Sbjct: 1560 KPILLEGSPGVGKTSLITALARETGHQLVRI 1590
>SPBC31E1.06 |bms1|SPBC800.01|GTP binding protein
Bms1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1121
Score = 31.1 bits (67), Expect = 0.16
Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = -1
Query: 662 PPKGVILYGPPGTGKTLLAKAVANQTSA-TFLRVVG 558
PP V + GPPGTGK+ L K++ + S T ++ G
Sbjct: 73 PPVIVAVMGPPGTGKSTLIKSLVRRYSKYTISQITG 108
>SPCC1442.07c |||ubiquitin/metalloprotease fusion
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 282
Score = 30.7 bits (66), Expect = 0.21
Identities = 15/60 (25%), Positives = 29/60 (48%)
Frame = -1
Query: 500 RVAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMAT 321
++ + H ++ + E+D R+DS + G Q +EL + D +D D K + +T
Sbjct: 140 KIMDSHRWTVPLLSEMDPAEHTRHDSKTLGLNHNQGAHIELRLRTDRYDGFRDYKTVKST 199
>SPCC830.11c |||adenylate kinase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 175
Score = 30.3 bits (65), Expect = 0.28
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = -1
Query: 650 VILYGPPGTGKTLLAKAVANQT 585
+I+ G PGTGKT LA+ VA T
Sbjct: 11 IIICGTPGTGKTTLAEQVAETT 32
>SPBC83.08 |||AAA family ATPase Rvb2 |Schizosaccharomyces pombe|chr
2|||Manual
Length = 465
Score = 29.1 bits (62), Expect = 0.64
Identities = 21/92 (22%), Positives = 42/92 (45%), Gaps = 2/92 (2%)
Frame = -1
Query: 656 KGVILYGPPGTGKTLLAKAVANQ--TSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEH 483
+ +++ GPP TGKT +A +A + F+ + SE+ + L++ L +
Sbjct: 66 RAILMAGPPSTGKTAIAMGMAQSLGSDTPFVTLSASEVYSLEMSKTEALLQALRKSIGVR 125
Query: 482 APSIVFIDEIDAVGTKRYDSNSGGEREIQRTM 387
I E + V + S +GG ++ + T+
Sbjct: 126 IKEETEIIEGEVVEVQIDRSITGGNKQGKLTI 157
>SPAC27E2.10c |rfc3|SPAPJ698.01c|DNA replication factor C complex
subunit Rfc3 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 342
Score = 28.7 bits (61), Expect = 0.85
Identities = 38/175 (21%), Positives = 72/175 (41%), Gaps = 3/175 (1%)
Frame = -1
Query: 650 VILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGD--GPKLVRELFRVAEEHAP 477
++ YGPPGTGKT A A + R ++L++ D G VRE ++ +
Sbjct: 59 MLFYGPPGTGKTSTILACARKIYGPNYR---NQLMELNASDDRGIDAVRE--QIKNFAST 113
Query: 476 SIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDP 297
+F + D+ + + R ++E + +V+ + N I + P
Sbjct: 114 RQIFASTFKMIILDEADAMTLAAQNALRRVIEKYTK--------NVRFCIICNYINKISP 165
Query: 296 ALIRPGRIDRKIEFPLPDEKTKRRI-FTIHTSRMTLADDVNLSELIMSKDXLXGA 135
A+ R R PLP ++ ++ + I + + D ++ L +SK + A
Sbjct: 166 AI--QSRCTRFRFQPLPPKEIEKTVDHVIQSEHCNIDPDAKMAVLRLSKGDMRKA 218
>SPAP11E10.02c |mam3|SPAPB1A10.01c|cell agglutination protein
Mam3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1082
Score = 28.3 bits (60), Expect = 1.1
Identities = 19/78 (24%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Frame = +1
Query: 292 SAGSKVSIRFVAMITFTSPLESKPSS*FNNSNMVL*ISLSPPEFE-S*RLVPTASISSMK 468
++ S VS++ + + +SP+ S + + S L S++P + L+P++S
Sbjct: 546 TSNSSVSLQTSSSLIISSPIISSSLTATSTSTPALTHSITPSNTSYTSSLIPSSSTDYSS 605
Query: 469 TIEGACSSATRNSSRTNL 522
++ CS+ T S T+L
Sbjct: 606 SLITVCSNVTSEISSTSL 623
>SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr
1|||Manual
Length = 234
Score = 28.3 bits (60), Expect = 1.1
Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = -1
Query: 650 VILYGPPGTGKT-LLAKAVANQTSATFLRVVGSELIQKYLGDG 525
++L GP GTGK+ LL + V NQ VG + + + G
Sbjct: 12 IVLAGPSGTGKSCLLQRFVKNQWDDQVSHTVGIDFASRIISVG 54
>SPBC4F6.17c |||mitochondrial matrix chaperone Hsp78
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 803
Score = 28.3 bits (60), Expect = 1.1
Identities = 16/46 (34%), Positives = 22/46 (47%), Gaps = 3/46 (6%)
Frame = -1
Query: 665 KPPKGVILYGPPGTGKTLLAKAVAN---QTSATFLRVVGSELIQKY 537
+P + GP G GKT L KA+A T +R SE +K+
Sbjct: 530 RPLASFLFLGPTGVGKTALTKALAEFLFDTDKAMIRFDMSEFQEKH 575
>SPAC4G9.12 |||gluconokinase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 193
Score = 27.9 bits (59), Expect = 1.5
Identities = 10/26 (38%), Positives = 18/26 (69%)
Frame = -1
Query: 647 ILYGPPGTGKTLLAKAVANQTSATFL 570
++ GP G+GKT +AKAV+ + ++
Sbjct: 18 VVIGPAGSGKTTMAKAVSEKLGFEYI 43
>SPBC115.02c |||AFG1 family mitochondrial ATPase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 454
Score = 27.5 bits (58), Expect = 2.0
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = -1
Query: 659 PKGVILYGPPGTGKTLL 609
PKG+ LYG G GKT L
Sbjct: 118 PKGIYLYGDVGCGKTAL 134
>SPAC8E11.10 |||sorbose reductase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 255
Score = 27.5 bits (58), Expect = 2.0
Identities = 13/51 (25%), Positives = 22/51 (43%)
Frame = -2
Query: 697 HIRNTMKXWESNLPKESSCTVLRALVKHSWPRLLQIRHLLPSYV*LDLNLY 545
HI N + W S +++ L + W ++ + P Y+ DL LY
Sbjct: 152 HIANWPQQWASYHATKAAVKHLARALAVEWAPFARVNSVSPGYIDTDLTLY 202
>SPBPB10D8.02c |||arylsulfatase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 554
Score = 27.1 bits (57), Expect = 2.6
Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 6/65 (9%)
Frame = -1
Query: 554 ELIQKYLG---DGPKLVRELFRVAEEHA---PSIVFIDEIDAVGTKRYDSNSGGEREIQR 393
E I KY G +GP ++R+ A++ P V +D +GTK +D + E+E
Sbjct: 228 EYINKYRGRYSEGPDVLRKNRLQAQKDLGLIPENVIPAPVDGMGTKSWDELTTEEKEFSA 287
Query: 392 TMLEL 378
+E+
Sbjct: 288 RTMEV 292
>SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 4196
Score = 26.6 bits (56), Expect = 3.4
Identities = 16/57 (28%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = -2
Query: 637 VLRALVKHSWPRLLQIR-HLLPSYV*LDLNLYKNIWVMVPSWFVNCSVLLRNMHLQL 470
++ + +KH+ L + LLPS V D YK++ +V W L++ H Q+
Sbjct: 219 LILSTIKHAEENNLDLSVRLLPSKVLSDSEFYKSLSNLVNVWLKTTRSLIKLFHDQI 275
Score = 25.8 bits (54), Expect = 6.0
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = -2
Query: 505 CSVLLRNMHLQLFSLMKLMQWALNVM 428
C++L RN+HL+ FS LNV+
Sbjct: 4084 CNILYRNVHLEEFSWGTFKDLLLNVV 4109
>SPAC1F3.09 |mug161||CwfJ family protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 561
Score = 26.2 bits (55), Expect = 4.5
Identities = 10/35 (28%), Positives = 21/35 (60%)
Frame = +1
Query: 451 SISSMKTIEGACSSATRNSSRTNLGPSPKYFCISS 555
S S++ + + S + N+ R+ +GP +FC+S+
Sbjct: 319 SHSALNNLHKSESGTSLNNRRSKVGPGSCFFCLSN 353
>SPAC16C9.06c |upf1||ATP-dependent RNA helicase
Upf1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 925
Score = 26.2 bits (55), Expect = 4.5
Identities = 9/17 (52%), Positives = 14/17 (82%)
Frame = -1
Query: 647 ILYGPPGTGKTLLAKAV 597
++ GPPGTGKT+ + +V
Sbjct: 411 LIQGPPGTGKTVTSASV 427
>SPCC1919.11 |mug137||BAR adaptor protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 420
Score = 26.2 bits (55), Expect = 4.5
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = +3
Query: 582 RCLICNSLGQECFTSARRTVQDDSFG 659
+CL C +LG+ ++ QD S+G
Sbjct: 64 KCLACENLGKVMINHSKELPQDSSYG 89
>SPAC1952.10c |||conserved fungal protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 361
Score = 25.8 bits (54), Expect = 6.0
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +2
Query: 191 LMSFLMYEW*KSFSWFSRQARG 256
L+SFL+Y+ K+F W Q G
Sbjct: 172 LLSFLVYKMNKAFGWIMYQQHG 193
>SPBC15D4.10c |amo1||nuclear rim protein Amo1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 475
Score = 25.8 bits (54), Expect = 6.0
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = -1
Query: 95 LRERRMKXTNED*QESKGKWP 33
L RRMK N+D + +K +WP
Sbjct: 62 LPNRRMKDINDDLKNAKPQWP 82
>SPCC737.07c |||DNA polymerase alpha-associated DNA helicase A
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 660
Score = 25.4 bits (53), Expect = 7.9
Identities = 8/11 (72%), Positives = 11/11 (100%)
Frame = -1
Query: 647 ILYGPPGTGKT 615
+++GPPGTGKT
Sbjct: 229 LIHGPPGTGKT 239
>SPBPB8B6.04c |grt1|SPAPB8B6.04c, SPAPB8B6.04c|transcription factor
Grt1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 648
Score = 25.4 bits (53), Expect = 7.9
Identities = 15/45 (33%), Positives = 19/45 (42%)
Frame = -1
Query: 440 TKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIET 306
+K+Y NS + M +L FD D K TNR ET
Sbjct: 574 SKKYQDNSVNNTYFDKVMQHVLVHSPAFDDSSDPK--FETNRSET 616
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,932,741
Number of Sequences: 5004
Number of extensions: 61787
Number of successful extensions: 271
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 224
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 244
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 323158234
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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