Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_pT_M10
         (351 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC065199-1|AAH65199.1|  453|Homo sapiens family with sequence si...    29   5.5  
BC037572-1|AAH37572.1|  453|Homo sapiens family with sequence si...    29   5.5  
AF123073-1|AAK01477.1|  453|Homo sapiens C/EBP-induced protein p...    29   5.5  
AK001063-1|BAA91487.1|  144|Homo sapiens protein ( Homo sapiens ...    28   9.5  

>BC065199-1|AAH65199.1|  453|Homo sapiens family with sequence
           similarity 117, member A protein.
          Length = 453

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = -2

Query: 242 KPNSLSHPAGVERGLPSPALCPAGTMKPWRLFI 144
           K +S  HPA +E G PSP L  A + +P   +I
Sbjct: 303 KASSPGHPAFLEDGSPSPVLAFAASPRPNHSYI 335


>BC037572-1|AAH37572.1|  453|Homo sapiens family with sequence
           similarity 117, member A protein.
          Length = 453

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = -2

Query: 242 KPNSLSHPAGVERGLPSPALCPAGTMKPWRLFI 144
           K +S  HPA +E G PSP L  A + +P   +I
Sbjct: 303 KASSPGHPAFLEDGSPSPVLAFAASPRPNHSYI 335


>AF123073-1|AAK01477.1|  453|Homo sapiens C/EBP-induced protein
           protein.
          Length = 453

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = -2

Query: 242 KPNSLSHPAGVERGLPSPALCPAGTMKPWRLFI 144
           K +S  HPA +E G PSP L  A + +P   +I
Sbjct: 303 KASSPGHPAFLEDGSPSPVLAFAASPRPNHSYI 335


>AK001063-1|BAA91487.1|  144|Homo sapiens protein ( Homo sapiens
           cDNA FLJ10201 fis, clone HEMBA1004923. ).
          Length = 144

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 22/81 (27%), Positives = 34/81 (41%), Gaps = 7/81 (8%)
 Frame = -2

Query: 245 PKPNSLSHPAGVERGLPSPALCPAGTMKPWRLFINLFRMKLKNSCYAR-------SLKPT 87
           P PN +S  A V   L    +  +     W +F+ LF +   +   AR       SL+P 
Sbjct: 53  PTPNPISGKATVSGELHCDIISLSFLSLGWNIFVCLFEIASHSVAQARVQYHNLDSLQPL 112

Query: 86  PPKRKHRQKCLLIIILYSHNH 24
           P + K     L ++I+  H H
Sbjct: 113 PSRLKPSSH-LSLLIIRDHRH 132


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 53,542,956
Number of Sequences: 237096
Number of extensions: 1175734
Number of successful extensions: 2578
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2488
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2573
length of database: 76,859,062
effective HSP length: 80
effective length of database: 57,891,382
effective search space used: 2084089752
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)