Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_pT_M08
         (520 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q5T6X5-3 Cluster: Isoform 3 of Q5T6X5 ; n=7; Eutheria|R...    33   5.2  
UniRef50_Q5T6X5-2 Cluster: Isoform 2 of Q5T6X5 ; n=4; Eutheria|R...    33   5.2  
UniRef50_Q5T6X5 Cluster: G-protein coupled receptor family C gro...    33   5.2  
UniRef50_Q34937 Cluster: MURF2 protein; n=9; Trypanosomatidae|Re...    32   6.8  
UniRef50_Q73LU7 Cluster: Putative uncharacterized protein; n=1; ...    32   9.0  
UniRef50_Q302K9 Cluster: ATP-binding region, ATPase-like; n=1; S...    32   9.0  

>UniRef50_Q5T6X5-3 Cluster: Isoform 3 of Q5T6X5 ; n=7; Eutheria|Rep:
           Isoform 3 of Q5T6X5 - Homo sapiens (Human)
          Length = 855

 Score = 32.7 bits (71), Expect = 5.2
 Identities = 15/33 (45%), Positives = 22/33 (66%)
 Frame = +2

Query: 422 YDFIGILLKHDDYTRLFLNIFVQQIKYNSVLSA 520
           +++IGI+   DDY RL LN F+ Q + N+V  A
Sbjct: 208 WNWIGIITTDDDYGRLALNTFIIQAEANNVCIA 240


>UniRef50_Q5T6X5-2 Cluster: Isoform 2 of Q5T6X5 ; n=4; Eutheria|Rep:
           Isoform 2 of Q5T6X5 - Homo sapiens (Human)
          Length = 751

 Score = 32.7 bits (71), Expect = 5.2
 Identities = 15/33 (45%), Positives = 22/33 (66%)
 Frame = +2

Query: 422 YDFIGILLKHDDYTRLFLNIFVQQIKYNSVLSA 520
           +++IGI+   DDY RL LN F+ Q + N+V  A
Sbjct: 208 WNWIGIITTDDDYGRLALNTFIIQAEANNVCIA 240


>UniRef50_Q5T6X5 Cluster: G-protein coupled receptor family C group
           6 member A precursor; n=10; Amniota|Rep: G-protein
           coupled receptor family C group 6 member A precursor -
           Homo sapiens (Human)
          Length = 926

 Score = 32.7 bits (71), Expect = 5.2
 Identities = 15/33 (45%), Positives = 22/33 (66%)
 Frame = +2

Query: 422 YDFIGILLKHDDYTRLFLNIFVQQIKYNSVLSA 520
           +++IGI+   DDY RL LN F+ Q + N+V  A
Sbjct: 208 WNWIGIITTDDDYGRLALNTFIIQAEANNVCIA 240


>UniRef50_Q34937 Cluster: MURF2 protein; n=9; Trypanosomatidae|Rep:
           MURF2 protein - Leishmania tarentolae (Sauroleishmania
           tarentolae)
          Length = 355

 Score = 32.3 bits (70), Expect = 6.8
 Identities = 11/23 (47%), Positives = 17/23 (73%)
 Frame = +2

Query: 365 LCFIICFM*FSLKINFVTVYDFI 433
           +CFI CF+ F ++  FV +YDF+
Sbjct: 163 ICFIFCFIFFVIRCLFVIIYDFL 185


>UniRef50_Q73LU7 Cluster: Putative uncharacterized protein; n=1;
           Treponema denticola|Rep: Putative uncharacterized
           protein - Treponema denticola
          Length = 101

 Score = 31.9 bits (69), Expect = 9.0
 Identities = 13/29 (44%), Positives = 21/29 (72%)
 Frame = -2

Query: 408 FIFSENYMKQIMKQSLIILSNVSLLFLSL 322
           F+FSE    Q+    +II+SN++L+FLS+
Sbjct: 16  FLFSETKKSQVYFNIIIIVSNIALMFLSI 44


>UniRef50_Q302K9 Cluster: ATP-binding region, ATPase-like; n=1;
           Streptococcus suis 89/1591|Rep: ATP-binding region,
           ATPase-like - Streptococcus suis 89/1591
          Length = 441

 Score = 31.9 bits (69), Expect = 9.0
 Identities = 18/70 (25%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
 Frame = +2

Query: 305 HAILYLKLKNSNETFESIIKLCFIICFM*FSLKINFVTVYDFIG-ILLKHDDYTRLFLNI 481
           +AI+Y    N N  FE++I + +  C   F  K +  T + +   I+L +D   R F +I
Sbjct: 45  YAIIYFISVNINYIFETLIFILYFYCIFRFIFKNDRPTSFFYSSYIVLSYDTIHRFFQSI 104

Query: 482 FVQQIKYNSV 511
             + + ++ +
Sbjct: 105 LNRLLNFDEI 114


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 440,062,995
Number of Sequences: 1657284
Number of extensions: 7739919
Number of successful extensions: 13831
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 13483
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13829
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 32201017387
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)