Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_pT_M08
         (520 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    25   0.47 
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              23   1.4  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    21   5.7  
DQ468657-1|ABE02558.1|  322|Apis mellifera 1,4,5-trisphosphate r...    21   7.6  
AB006152-1|BAA24504.1|  178|Apis mellifera inositol 1,4,5-tripho...    21   7.6  

>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 25.0 bits (52), Expect = 0.47
 Identities = 15/64 (23%), Positives = 26/64 (40%), Gaps = 3/64 (4%)
 Frame = +2

Query: 326 LKNSNETFESIIKLCFIICFM*---FSLKINFVTVYDFIGILLKHDDYTRLFLNIFVQQI 496
           + N N  F  + +  F + FM      LK     +YD +G ++    +   F  +    I
Sbjct: 198 MTNENSEFRRMGREVFAVNFMNVMRMKLKQFMPRLYDLLGYVMPDRTFAPFFTRVVTDTI 257

Query: 497 KYNS 508
           KY +
Sbjct: 258 KYRN 261


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 10/28 (35%), Positives = 17/28 (60%)
 Frame = +2

Query: 17   LYTK*NKLTNNKFVIVQIITCFTNYVCQ 100
            +YTK  K+T++   I+  +  +TNY  Q
Sbjct: 1128 IYTKDTKITSSSETILHGLKKYTNYSMQ 1155


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 8/27 (29%), Positives = 15/27 (55%)
 Frame = -1

Query: 130 NYLTKPARDLLTNIISKTCDNLNNDKF 50
           N LT+P +D    +   T + +NN ++
Sbjct: 427 NGLTEPKKDNKRKLSDSTMNKINNHEY 453


>DQ468657-1|ABE02558.1|  322|Apis mellifera 1,4,5-trisphosphate
           receptor protein.
          Length = 322

 Score = 21.0 bits (42), Expect = 7.6
 Identities = 5/16 (31%), Positives = 10/16 (62%)
 Frame = -1

Query: 373 ETKFDYTFKCFITVFK 326
           + + DY   C +++FK
Sbjct: 60  DVRLDYRISCLLSIFK 75


>AB006152-1|BAA24504.1|  178|Apis mellifera inositol
           1,4,5-triphosphate recepter protein.
          Length = 178

 Score = 21.0 bits (42), Expect = 7.6
 Identities = 5/16 (31%), Positives = 10/16 (62%)
 Frame = -1

Query: 373 ETKFDYTFKCFITVFK 326
           + + DY   C +++FK
Sbjct: 28  DVRLDYRISCLLSIFK 43


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 134,587
Number of Sequences: 438
Number of extensions: 2737
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14477538
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)