Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_pT_M07
         (726 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    23   3.3  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    22   4.4  
DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.    21   7.7  

>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory
          receptor candidate 43 protein.
          Length = 353

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = +1

Query: 31 LVISAHVRSFHKNLSHI 81
          +V+S + +SFH+N  HI
Sbjct: 47 VVVSIYSKSFHRNEIHI 63


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 8/25 (32%), Positives = 16/25 (64%)
 Frame = -2

Query: 635 RKQRIFFIKIMFSDEAHFQLGGYVN 561
           RK+ + F + M   +  F++GG++N
Sbjct: 344 RKELLLFAEQMGQRQVAFKVGGFLN 368


>DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.
          Length = 314

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 9/47 (19%), Positives = 19/47 (40%)
 Frame = -2

Query: 617 FIKIMFSDEAHFQLGGYVNKQSCRIRGSQNPQTLFEKPLHPKKVTVW 477
           F+++  +    F+    V         +Q+P  ++  P  P K + W
Sbjct: 68  FLEMTLAHHCRFKFSSSVGWSPAGHEEAQSPHRIYMHPESPSKGSHW 114


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 186,150
Number of Sequences: 336
Number of extensions: 4246
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19363530
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)