Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_pT_M07
         (726 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase pr...    24   1.7  
AY739658-1|AAU85297.1|  664|Apis mellifera hyperpolarization-act...    23   2.2  
AY280848-1|AAQ16312.1|  632|Apis mellifera hyperpolarization-act...    23   2.2  
DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    22   5.1  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    22   5.1  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    22   5.1  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    22   5.1  
AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase prec...    22   5.1  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              22   5.1  
AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    21   9.0  
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    21   9.0  

>AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase
           protein.
          Length = 342

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = -3

Query: 229 PPRSCDFSPLDYFLW 185
           PP S D +P DYFL+
Sbjct: 270 PPYSPDLAPSDYFLF 284


>AY739658-1|AAU85297.1|  664|Apis mellifera
           hyperpolarization-activated ion channelvariant L
           protein.
          Length = 664

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +2

Query: 116 RRISSFRAPVFCGLFT 163
           RR++S RA  +C LF+
Sbjct: 530 RRVASVRAETYCNLFS 545


>AY280848-1|AAQ16312.1|  632|Apis mellifera
           hyperpolarization-activated ion channel protein.
          Length = 632

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +2

Query: 116 RRISSFRAPVFCGLFT 163
           RR++S RA  +C LF+
Sbjct: 498 RRVASVRAETYCNLFS 513


>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 22.2 bits (45), Expect = 5.1
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = +3

Query: 336 TDVNISQLWPQKIGYHGLVAQRIHG 410
           T  NI+  W     YH LVA++ +G
Sbjct: 164 TGKNITTPWDYYYIYHTLVAEQSYG 188


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 22.2 bits (45), Expect = 5.1
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +1

Query: 238 HRQIEKLRDRVISHAITDLFG 300
           H++I KLR  +I H+    FG
Sbjct: 650 HKRIVKLRGSIIDHSYGGGFG 670


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 22.2 bits (45), Expect = 5.1
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +1

Query: 238 HRQIEKLRDRVISHAITDLFG 300
           H++I KLR  +I H+    FG
Sbjct: 688 HKRIVKLRGSIIDHSYGGGFG 708


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 22.2 bits (45), Expect = 5.1
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = +3

Query: 336 TDVNISQLWPQKIGYHGLVAQRIHG 410
           T  NI+  W     YH LVA++ +G
Sbjct: 179 TGKNITTPWDYYYIYHTLVAEQSYG 203


>AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase
           precursor protein.
          Length = 156

 Score = 22.2 bits (45), Expect = 5.1
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = +3

Query: 336 TDVNISQLWPQKIGYHGLVAQRIHG 410
           T  NI+  W     YH LVA++ +G
Sbjct: 67  TGKNITTPWDYYYIYHTLVAEQSYG 91


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 22.2 bits (45), Expect = 5.1
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = -2

Query: 599 SDEAHFQLGGYVNKQSCRIRGSQNP 525
           S++A F L G     +C I G Q+P
Sbjct: 863 SNDALFVLNGETRTINCEIGGLQHP 887


>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = +1

Query: 259 RDRVISHAITDLFGRLVAPSCWDQG 333
           R  + ++ I +LFGR+    C D G
Sbjct: 58  RLNIPANEILELFGRMFFEFCQDSG 82


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = +1

Query: 259 RDRVISHAITDLFGRLVAPSCWDQG 333
           R  + ++ I +LFGR+    C D G
Sbjct: 58  RLNIPANEILELFGRMFFEFCQDSG 82


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 213,006
Number of Sequences: 438
Number of extensions: 4983
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22535775
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)