Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_pT_M02
         (759 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    26   0.28 
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    25   0.66 
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    23   2.6  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    23   3.5  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    22   6.1  
AY052394-1|AAL15468.1|  228|Tribolium castaneum tryptophan oxyge...    22   6.1  
AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan oxyge...    22   6.1  
AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan oxyge...    22   6.1  

>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 26.2 bits (55), Expect = 0.28
 Identities = 23/85 (27%), Positives = 43/85 (50%)
 Frame = +1

Query: 373 SPPRSWSWLLKTPSSQTLNANENALNQISVNENVPILNEISSS*SRKRTENDSLTSNATS 552
           +PPRS    L TPS+     +    + +SV+ + P   + ++S     T + +L+S A+S
Sbjct: 121 APPRSTP-PLSTPSNSNATKSSGLTSPLSVSTSPP--GKPATS-----TTSQNLSSPASS 172

Query: 553 TSRVTATWTFQSLWTSRSHEETSNP 627
           TS  ++T    +   +    ++SNP
Sbjct: 173 TSSTSSTEKAGTNNNNSKSSQSSNP 197


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 25.0 bits (52), Expect = 0.66
 Identities = 25/73 (34%), Positives = 31/73 (42%), Gaps = 5/73 (6%)
 Frame = +3

Query: 432 ERERSEPDLGERERADPERDL---EFLEPEADRERLLDLERDFDFS--RDGDLDLPEPLD 596
           ER  S P+L +R  A   R+L     L   +  E + DL  D      RD     P P  
Sbjct: 35  ERYPSGPELSDRSAAYTNRELYGTRALPLRSAVEHIPDLIADSRRLPLRDAVEKRPPP-- 92

Query: 597 FSEPRGDFEPDFD 635
             EP  D+EP FD
Sbjct: 93  -DEPIDDYEPSFD 104


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 10/15 (66%), Positives = 13/15 (86%)
 Frame = +1

Query: 61  SSFSQNHYVLTTHST 105
           SS S+N+YVLT +ST
Sbjct: 387 SSNSRNNYVLTNNST 401


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -2

Query: 461 TEIWFRAFSFAFKVW 417
           T +W RA +FA +VW
Sbjct: 566 TRLWPRAAAFAERVW 580


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = -2

Query: 461 TEIWFRAFSFAFKVW 417
           T IW R+ +FA ++W
Sbjct: 524 TRIWPRSAAFAERIW 538


>AY052394-1|AAL15468.1|  228|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 228

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = +1

Query: 25  QGRVNVKVYPTYSSFSQNHYVLT 93
           QG + +  Y     FSQ H +LT
Sbjct: 111 QGAIMITFYRDEPRFSQPHQILT 133


>AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = +1

Query: 25  QGRVNVKVYPTYSSFSQNHYVLT 93
           QG + +  Y     FSQ H +LT
Sbjct: 271 QGAIMITFYRDEPRFSQPHQILT 293


>AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = +1

Query: 25  QGRVNVKVYPTYSSFSQNHYVLT 93
           QG + +  Y     FSQ H +LT
Sbjct: 271 QGAIMITFYRDEPRFSQPHQILT 293


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,169
Number of Sequences: 336
Number of extensions: 2043
Number of successful extensions: 12
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20338724
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)