Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_pT_M02
         (759 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    29   0.21 
AY578811-1|AAT07316.1|  565|Anopheles gambiae thickveins protein.      27   0.83 
U02964-1|AAA03444.1|  376|Anopheles gambiae actin 1D protein.          25   3.3  
U02933-1|AAA56882.1|  376|Anopheles gambiae actin 1D protein.          25   3.3  
U02930-1|AAA56881.1|  376|Anopheles gambiae actin 1D protein.          25   3.3  

>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 28.7 bits (61), Expect = 0.21
 Identities = 16/47 (34%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
 Frame = +3

Query: 429 RERERSEPDLGERERADPE-RDLEFLEPEADRERLLDLERDFDFSRD 566
           RE+E+ E +  ER++ + E R+ E  E E +RE   + ER+ +  R+
Sbjct: 488 REKEQREKEERERQQREKEQREREQREKEREREAARERERERERERE 534



 Score = 28.3 bits (60), Expect = 0.27
 Identities = 24/63 (38%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
 Frame = +3

Query: 429 RERERSEPDLGERERADPERDLEFLEPEADRERLLDLERDFDFSRDGDL---DLPEPLDF 599
           RER++ E +  ERE+ + ER     E EA RER  + ER+ +  R   +    LP P  F
Sbjct: 498 RERQQREKEQREREQREKER-----EREAARERERERERERERERMMHMMPHSLPRPF-F 551

Query: 600 SEP 608
           S P
Sbjct: 552 SIP 554



 Score = 24.6 bits (51), Expect = 3.3
 Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
 Frame = +3

Query: 429 RERERSEPDLGERE-RADPERDLEFLEPEADRERLLDLERDFDFSRD 566
           RERE+ E +  E+E R   ER+ +  E E       + ER+ + +R+
Sbjct: 478 REREQREKEQREKEQREKEERERQQREKEQREREQREKEREREAARE 524


>AY578811-1|AAT07316.1|  565|Anopheles gambiae thickveins protein.
          Length = 565

 Score = 26.6 bits (56), Expect = 0.83
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = -2

Query: 665 EWREGKVSFAIKIGFEVSSWLREVQ 591
           +WR+ KV+  I    E SSW RE +
Sbjct: 277 KWRDEKVAVKIFFTTEESSWFRETE 301


>U02964-1|AAA03444.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score = 24.6 bits (51), Expect = 3.3
 Identities = 8/25 (32%), Positives = 14/25 (56%)
 Frame = +1

Query: 577 TFQSLWTSRSHEETSNPILIANETF 651
           TFQ +W S+   + S P ++  + F
Sbjct: 352 TFQQMWISKQEYDESGPSIVHRKCF 376


>U02933-1|AAA56882.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score = 24.6 bits (51), Expect = 3.3
 Identities = 8/25 (32%), Positives = 14/25 (56%)
 Frame = +1

Query: 577 TFQSLWTSRSHEETSNPILIANETF 651
           TFQ +W S+   + S P ++  + F
Sbjct: 352 TFQQMWISKQEYDESGPSIVHRKCF 376


>U02930-1|AAA56881.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score = 24.6 bits (51), Expect = 3.3
 Identities = 8/25 (32%), Positives = 14/25 (56%)
 Frame = +1

Query: 577 TFQSLWTSRSHEETSNPILIANETF 651
           TFQ +W S+   + S P ++  + F
Sbjct: 352 TFQQMWISKQEYDESGPSIVHRKCF 376


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 441,931
Number of Sequences: 2352
Number of extensions: 8728
Number of successful extensions: 27
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 78586767
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)