Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P17_pT_M02
(759 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U21310-3|AAA62522.2| 1288|Caenorhabditis elegans Hypothetical pr... 32 0.51
Z80215-6|CAD56562.2| 1052|Caenorhabditis elegans Hypothetical pr... 31 1.2
Z80215-5|CAB02273.3| 1049|Caenorhabditis elegans Hypothetical pr... 31 1.2
U55376-4|AAA98006.1| 57|Caenorhabditis elegans Hypothetical pr... 29 3.6
Z92806-5|CAB07255.2| 1251|Caenorhabditis elegans Hypothetical pr... 28 6.3
U41272-1|AAA82446.2| 584|Caenorhabditis elegans Hypothetical pr... 28 6.3
AF016670-2|AAB66100.1| 178|Caenorhabditis elegans Hypothetical ... 28 6.3
AY028166-1|AAK19022.1| 342|Caenorhabditis elegans EFL-1 protein. 28 8.3
AL031627-9|CAA20948.1| 342|Caenorhabditis elegans Hypothetical ... 28 8.3
>U21310-3|AAA62522.2| 1288|Caenorhabditis elegans Hypothetical protein
F40H6.5 protein.
Length = 1288
Score = 31.9 bits (69), Expect = 0.51
Identities = 20/58 (34%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Frame = +1
Query: 457 SVNENVPILNEISSS*SRKRTENDSLTSNATSTSRVT-ATWTFQSLWTSRSHEETSNP 627
S EN+P ++I + + +R + LTS ATSTS T +T T + T+ + T+ P
Sbjct: 933 STTENIPSTSKIPETSTTQRPTSPILTSGATSTSSSTESTTTSPTTSTTTTLPPTTTP 990
>Z80215-6|CAD56562.2| 1052|Caenorhabditis elegans Hypothetical
protein C36B1.8b protein.
Length = 1052
Score = 30.7 bits (66), Expect = 1.2
Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Frame = +1
Query: 403 KTPSSQTLNANENALNQISVNENVPILNEISSS*SRKRTENDSLTSN--ATSTSRVTATW 576
K+ T+N N + +N + + S+S S T ND+ +SN +TSTS +T+T
Sbjct: 55 KSTDGSTMNGNNATATAAATTQNSSQIGQNSNS-SHSVT-NDNTSSNNASTSTSSITSTT 112
Query: 577 TFQSLWTSRSHEETSN 624
T + S ++ N
Sbjct: 113 TTTTTVPSSQQSQSQN 128
>Z80215-5|CAB02273.3| 1049|Caenorhabditis elegans Hypothetical
protein C36B1.8a protein.
Length = 1049
Score = 30.7 bits (66), Expect = 1.2
Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Frame = +1
Query: 403 KTPSSQTLNANENALNQISVNENVPILNEISSS*SRKRTENDSLTSN--ATSTSRVTATW 576
K+ T+N N + +N + + S+S S T ND+ +SN +TSTS +T+T
Sbjct: 55 KSTDGSTMNGNNATATAAATTQNSSQIGQNSNS-SHSVT-NDNTSSNNASTSTSSITSTT 112
Query: 577 TFQSLWTSRSHEETSN 624
T + S ++ N
Sbjct: 113 TTTTTVPSSQQSQSQN 128
>U55376-4|AAA98006.1| 57|Caenorhabditis elegans Hypothetical
protein F16H11.2 protein.
Length = 57
Score = 29.1 bits (62), Expect = 3.6
Identities = 20/45 (44%), Positives = 27/45 (60%)
Frame = +3
Query: 429 RERERSEPDLGERERADPERDLEFLEPEADRERLLDLERDFDFSR 563
RERER ERER + ER+ E E E +RER + ER+ + +R
Sbjct: 13 RERERERERERERER-ERERERE-REREREREREREREREKESNR 55
Score = 27.9 bits (59), Expect = 8.3
Identities = 19/40 (47%), Positives = 24/40 (60%)
Frame = +3
Query: 429 RERERSEPDLGERERADPERDLEFLEPEADRERLLDLERD 548
RERER ERER + ER+ E E E +RER + ER+
Sbjct: 11 RERERERERERERER-ERERERE-RERERERERERERERE 48
>Z92806-5|CAB07255.2| 1251|Caenorhabditis elegans Hypothetical
protein K10G4.5 protein.
Length = 1251
Score = 28.3 bits (60), Expect = 6.3
Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = +1
Query: 43 KVYPTYSSFSQN-HYVLTTHSTLTHYVNPVSNHYASDFETFRSRS 174
+V+ SSFS N +L + +Y+ + +A DFE FRS S
Sbjct: 502 EVFANRSSFSDNLRLILLNQKSPINYLKLMLPWFAPDFEWFRSMS 546
>U41272-1|AAA82446.2| 584|Caenorhabditis elegans Hypothetical
protein T03G11.4 protein.
Length = 584
Score = 28.3 bits (60), Expect = 6.3
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = -2
Query: 191 KEFWIGERLRKVSKSLA*WFETGFT 117
K W + L+ VSKS + WF+TG T
Sbjct: 154 KYAWGHDTLKPVSKSYSDWFDTGLT 178
>AF016670-2|AAB66100.1| 178|Caenorhabditis elegans Hypothetical
protein K02F6.6 protein.
Length = 178
Score = 28.3 bits (60), Expect = 6.3
Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 6/64 (9%)
Frame = +3
Query: 438 ERSEPDLGERERADPERDLEFLEPEADRERLLDLE-RDFD----FSRDGDLDLPEP-LDF 599
E S+ + E+ R + L+ +A +D + FD F RDGD+DLPE +
Sbjct: 10 ENSQLYRKQTEKCKKSRRTDVLQTDASNCIFIDRSPKHFDLILNFLRDGDVDLPEQGKEL 69
Query: 600 SEPR 611
EPR
Sbjct: 70 KEPR 73
>AY028166-1|AAK19022.1| 342|Caenorhabditis elegans EFL-1 protein.
Length = 342
Score = 27.9 bits (59), Expect = 8.3
Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 7/52 (13%)
Frame = +3
Query: 453 DLGERERADPE--RDLEFLEPEADRERLL-----DLERDFDFSRDGDLDLPE 587
D G R+ +D E + LE + + + L+ +L+ DFDF D DLD P+
Sbjct: 10 DPGFRQLSDMELQKALEMTKQSSIKNNLMLGLDNELDFDFDFDEDEDLDQPQ 61
>AL031627-9|CAA20948.1| 342|Caenorhabditis elegans Hypothetical
protein Y102A5C.18 protein.
Length = 342
Score = 27.9 bits (59), Expect = 8.3
Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 7/52 (13%)
Frame = +3
Query: 453 DLGERERADPE--RDLEFLEPEADRERLL-----DLERDFDFSRDGDLDLPE 587
D G R+ +D E + LE + + + L+ +L+ DFDF D DLD P+
Sbjct: 10 DPGFRQLSDMELQKALEMTKQSSIKNNLMLGLDNELDFDFDFDEDEDLDQPQ 61
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,932,524
Number of Sequences: 27780
Number of extensions: 197809
Number of successful extensions: 856
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 783
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 844
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1809061256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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