Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_pT_L24
         (641 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC117688-1|AAI17689.1| 1966|Homo sapiens dedicator of cytokinesi...    31   3.5  
AY233380-1|AAO73565.1| 1966|Homo sapiens DOCK4 protein.                31   3.5  
AK098050-1|BAC05221.1|  279|Homo sapiens protein ( Homo sapiens ...    31   3.5  
AC005047-1|AAS07431.1|  168|Homo sapiens unknown protein.              31   3.5  
AB018259-1|BAA34436.3| 1388|Homo sapiens KIAA0716 protein protein.     31   3.5  
Z29074-1|CAA82315.1|  623|Homo sapiens cytokeratin 9 protein.          27   4.5  
X75015-1|CAA52924.1|  622|Homo sapiens keratin 9 protein.              27   4.5  
S69510-1|AAC60619.1|  622|Homo sapiens cytokeratin 9 protein.          27   4.5  
BC117689-1|AAI17690.1| 2011|Homo sapiens DOCK4 protein protein.        31   4.6  

>BC117688-1|AAI17689.1| 1966|Homo sapiens dedicator of cytokinesis 4
            protein.
          Length = 1966

 Score = 31.1 bits (67), Expect = 3.5
 Identities = 14/26 (53%), Positives = 16/26 (61%)
 Frame = -1

Query: 554  RDTPAPLKLSSNITLKPSARPPKPLA 477
            R  P P  LS  +T +P A PPKPLA
Sbjct: 1912 RPVPLPHSLSIPVTSEPPALPPKPLA 1937


>AY233380-1|AAO73565.1| 1966|Homo sapiens DOCK4 protein.
          Length = 1966

 Score = 31.1 bits (67), Expect = 3.5
 Identities = 14/26 (53%), Positives = 16/26 (61%)
 Frame = -1

Query: 554  RDTPAPLKLSSNITLKPSARPPKPLA 477
            R  P P  LS  +T +P A PPKPLA
Sbjct: 1912 RPVPLPHSLSIPVTSEPPALPPKPLA 1937


>AK098050-1|BAC05221.1|  279|Homo sapiens protein ( Homo sapiens
           cDNA FLJ40731 fis, clone TKIDN2000521. ).
          Length = 279

 Score = 31.1 bits (67), Expect = 3.5
 Identities = 14/26 (53%), Positives = 16/26 (61%)
 Frame = -1

Query: 554 RDTPAPLKLSSNITLKPSARPPKPLA 477
           R  P P  LS  +T +P A PPKPLA
Sbjct: 225 RPVPLPHSLSIPVTSEPPALPPKPLA 250


>AC005047-1|AAS07431.1|  168|Homo sapiens unknown protein.
          Length = 168

 Score = 31.1 bits (67), Expect = 3.5
 Identities = 14/26 (53%), Positives = 16/26 (61%)
 Frame = -1

Query: 554 RDTPAPLKLSSNITLKPSARPPKPLA 477
           R  P P  LS  +T +P A PPKPLA
Sbjct: 114 RPVPLPHSLSIPVTSEPPALPPKPLA 139


>AB018259-1|BAA34436.3| 1388|Homo sapiens KIAA0716 protein protein.
          Length = 1388

 Score = 31.1 bits (67), Expect = 3.5
 Identities = 14/26 (53%), Positives = 16/26 (61%)
 Frame = -1

Query: 554  RDTPAPLKLSSNITLKPSARPPKPLA 477
            R  P P  LS  +T +P A PPKPLA
Sbjct: 1334 RPVPLPHSLSIPVTSEPPALPPKPLA 1359


>Z29074-1|CAA82315.1|  623|Homo sapiens cytokeratin 9 protein.
          Length = 623

 Score = 26.6 bits (56), Expect(2) = 4.5
 Identities = 13/26 (50%), Positives = 14/26 (53%)
 Frame = +1

Query: 265 GGDAVSAISGVGRGDSVRCGNAIGGS 342
           GG   S+ SG G G S  CG   GGS
Sbjct: 43  GGGRFSSSSGYGGGSSRVCGRGGGGS 68



 Score = 22.6 bits (46), Expect(2) = 4.5
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = +1

Query: 460 GGFVNLARGFGGLADG 507
           GGF   +RGFGG + G
Sbjct: 88  GGFGGGSRGFGGASGG 103


>X75015-1|CAA52924.1|  622|Homo sapiens keratin 9 protein.
          Length = 622

 Score = 26.6 bits (56), Expect(2) = 4.5
 Identities = 13/26 (50%), Positives = 14/26 (53%)
 Frame = +1

Query: 265 GGDAVSAISGVGRGDSVRCGNAIGGS 342
           GG   S+ SG G G S  CG   GGS
Sbjct: 42  GGGRFSSSSGYGGGSSRVCGRGGGGS 67



 Score = 22.6 bits (46), Expect(2) = 4.5
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = +1

Query: 460 GGFVNLARGFGGLADG 507
           GGF   +RGFGG + G
Sbjct: 87  GGFGGGSRGFGGASGG 102


>S69510-1|AAC60619.1|  622|Homo sapiens cytokeratin 9 protein.
          Length = 622

 Score = 26.6 bits (56), Expect(2) = 4.5
 Identities = 13/26 (50%), Positives = 14/26 (53%)
 Frame = +1

Query: 265 GGDAVSAISGVGRGDSVRCGNAIGGS 342
           GG   S+ SG G G S  CG   GGS
Sbjct: 42  GGGRFSSSSGYGGGSSRVCGRGGGGS 67



 Score = 22.6 bits (46), Expect(2) = 4.5
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = +1

Query: 460 GGFVNLARGFGGLADG 507
           GGF   +RGFGG + G
Sbjct: 87  GGFGGGSRGFGGASGG 102


>BC117689-1|AAI17690.1| 2011|Homo sapiens DOCK4 protein protein.
          Length = 2011

 Score = 30.7 bits (66), Expect = 4.6
 Identities = 14/26 (53%), Positives = 16/26 (61%)
 Frame = -1

Query: 554  RDTPAPLKLSSNITLKPSARPPKPLA 477
            R  P P  LS  +T +P A PPKPLA
Sbjct: 1957 RPIPLPHSLSIPVTSEPPALPPKPLA 1982


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 61,487,407
Number of Sequences: 237096
Number of extensions: 1090816
Number of successful extensions: 3779
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 3572
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3768
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7085195460
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)