Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_pT_L23
         (494 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z37093-3|CAA85465.1|  448|Caenorhabditis elegans Hypothetical pr...    31   0.35 
AF125461-4|AAK18995.1| 1360|Caenorhabditis elegans Hypothetical ...    31   0.61 
Z83127-5|CAB05628.2|  575|Caenorhabditis elegans Hypothetical pr...    28   3.2  
Z81515-5|CAB04193.2|  238|Caenorhabditis elegans Hypothetical pr...    27   5.7  
AF024492-1|AAF98622.2|  314|Caenorhabditis elegans Hypothetical ...    27   5.7  

>Z37093-3|CAA85465.1|  448|Caenorhabditis elegans Hypothetical
           protein ZK669.4 protein.
          Length = 448

 Score = 31.5 bits (68), Expect = 0.35
 Identities = 24/71 (33%), Positives = 33/71 (46%), Gaps = 2/71 (2%)
 Frame = -2

Query: 271 KAQETGQLKNIGTENEA--LEVRGEFAYIGPDGVTYXVTYVANRGWIPAFGTSHSQGLKS 98
           K   T  ++ I  EN+    EVRG     G DG       +   G +PA  TS S  +++
Sbjct: 144 KVLATPAVRRIAIENKIKLAEVRGT----GKDGRVLKEDVLKFLGQVPADHTSGSTNIRT 199

Query: 97  TEQAPAXSPKN 65
           T QAP  S K+
Sbjct: 200 THQAPQPSSKS 210


>AF125461-4|AAK18995.1| 1360|Caenorhabditis elegans Hypothetical
           protein Y8A9A.2 protein.
          Length = 1360

 Score = 30.7 bits (66), Expect = 0.61
 Identities = 12/27 (44%), Positives = 18/27 (66%)
 Frame = -3

Query: 135 QPSAPHIPKALSQPNRPQHXVRKILIH 55
           +PS P +P  L QP+ PQ+ +R +L H
Sbjct: 366 RPSLPALPLILLQPSLPQNQLRSLLAH 392


>Z83127-5|CAB05628.2|  575|Caenorhabditis elegans Hypothetical
           protein T23F6.5 protein.
          Length = 575

 Score = 28.3 bits (60), Expect = 3.2
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +3

Query: 66  FFGLXAGACSVDLRPWECEVPKAGIHP 146
           FFG+ +  C+  L P  C  P+  +HP
Sbjct: 49  FFGIRSFVCTCHLSPIACANPQFAVHP 75


>Z81515-5|CAB04193.2|  238|Caenorhabditis elegans Hypothetical
           protein F26H11.5 protein.
          Length = 238

 Score = 27.5 bits (58), Expect = 5.7
 Identities = 11/29 (37%), Positives = 18/29 (62%)
 Frame = -2

Query: 301 NTGYETSNGIKAQETGQLKNIGTENEALE 215
           NTG     GI A+E+G+ +   TE++ L+
Sbjct: 58  NTGLRRMPGISAEESGETQTFETEDDILD 86


>AF024492-1|AAF98622.2|  314|Caenorhabditis elegans Hypothetical
           protein F14F9.5 protein.
          Length = 314

 Score = 27.5 bits (58), Expect = 5.7
 Identities = 17/51 (33%), Positives = 23/51 (45%), Gaps = 2/51 (3%)
 Frame = -2

Query: 304 YNTGYETSNGIKAQETGQLKNIG--TENEALEVRGEFAYIGPDGVTYXVTY 158
           Y+T Y TSNGI+   T  + N G   EN   ++      + PD V     Y
Sbjct: 17  YSTSYSTSNGIRLM-TFNIWNSGANVENGQQKIAKHILMVNPDVVALQEVY 66


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,266,066
Number of Sequences: 27780
Number of extensions: 129974
Number of successful extensions: 371
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 355
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 371
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 935344784
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)