Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_pT_L21
         (673 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q5CST5 Cluster: Putative uncharacterized protein; n=2; ...    35   2.1  
UniRef50_A5K7F8 Cluster: Putative uncharacterized protein; n=1; ...    33   4.8  
UniRef50_Q7PUK4 Cluster: ENSANGP00000018171; n=3; Culicidae|Rep:...    33   8.3  

>UniRef50_Q5CST5 Cluster: Putative uncharacterized protein; n=2;
           Cryptosporidium|Rep: Putative uncharacterized protein -
           Cryptosporidium parvum Iowa II
          Length = 962

 Score = 34.7 bits (76), Expect = 2.1
 Identities = 17/34 (50%), Positives = 23/34 (67%)
 Frame = +2

Query: 110 CINFV*SNLLKNIFSFLYYKFLLIISKNIPLNFR 211
           C +FV  + +KNIF FL YKFL  + K+I L F+
Sbjct: 715 CSHFVNFSHIKNIFMFLPYKFLTKMKKSIDLIFK 748


>UniRef50_A5K7F8 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium vivax|Rep: Putative uncharacterized protein -
           Plasmodium vivax
          Length = 649

 Score = 33.5 bits (73), Expect = 4.8
 Identities = 15/41 (36%), Positives = 25/41 (60%)
 Frame = -2

Query: 330 NYIIRFHCTKRKIFLNEDVRVLYKVSNSYVIHFFHFVLMIL 208
           +YII  H  K+K F  +   + + ++ SYV H+ HF+L+ L
Sbjct: 587 DYIIP-HDKKQKYFYQKSAVITFSMAISYVFHYLHFLLVAL 626


>UniRef50_Q7PUK4 Cluster: ENSANGP00000018171; n=3; Culicidae|Rep:
           ENSANGP00000018171 - Anopheles gambiae str. PEST
          Length = 319

 Score = 32.7 bits (71), Expect = 8.3
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = +3

Query: 234 SELHNYLKPYIIL*HLHLRISFVLCSG 314
           S  HNYL+P +   HLH ++  V C+G
Sbjct: 143 SSCHNYLQPDLFAAHLHQQVGLVACNG 169


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 546,249,344
Number of Sequences: 1657284
Number of extensions: 10055086
Number of successful extensions: 18071
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 17411
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18070
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 51652897375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)