Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_pT_L19
         (699 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_02_0190 - 7630282-7630287,7630383-7630547,7630641-7630691,763...    84   9e-17
04_04_0663 + 27058470-27059033,27059355-27059972                       31   0.67 
06_03_1360 + 29558789-29559020,29559203-29559378,29560285-295603...    29   3.5  
03_02_0829 - 11599665-11600364,11600853-11601076,11601786-116020...    29   3.5  

>02_02_0190 -
           7630282-7630287,7630383-7630547,7630641-7630691,
           7630955-7631128,7631882-7632116,7632224-7632306,
           7633826-7633866,7633986-7634067
          Length = 278

 Score = 84.2 bits (199), Expect = 9e-17
 Identities = 51/123 (41%), Positives = 72/123 (58%), Gaps = 9/123 (7%)
 Frame = -1

Query: 696 LSLMHNPVANXNHYRAYVAFKMPELRLLDFRKIKXKERDEANALFKSRKGKEIQREIAKK 517
           LSL+ N V     YR YV  K+  LRLLDF+K+K +ER  A   F S++ +E  +++   
Sbjct: 112 LSLLDNTVTKQPDYRLYVIHKLKHLRLLDFKKVKQQERIAAAQKFHSKEAEEEAKKV--P 169

Query: 516 AKTFVPG-------GNMPD--PKVTNLTPQEIHKIREAIKNASSLQEVERLTRMLQSGQI 364
           AKTF PG         M +  PKV   TP++I  I+ AI N+ +L+EV RL + L +GQI
Sbjct: 170 AKTFTPGQVVDAQDTTMEEQGPKVVAPTPEQITAIKAAIVNSQTLEEVARLEKALSTGQI 229

Query: 363 PGQ 355
           P +
Sbjct: 230 PAE 232


>04_04_0663 + 27058470-27059033,27059355-27059972
          Length = 393

 Score = 31.5 bits (68), Expect = 0.67
 Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 6/76 (7%)
 Frame = -1

Query: 549 GKEIQREIAKKAKTFVPGGNMPDPKVTNLTPQE--IHKIREAIKNASSLQEVERLTRMLQ 376
           GKEIQR +    K     GN P  K T   PQ     +I ++++N  S Q + + T+ LQ
Sbjct: 82  GKEIQRNVGNVEKENPQVGNAPVDKSTQEVPQNQLPTQIPQSVQNQLSTQ-IPQSTQTLQ 140

Query: 375 SGQ----IPGQKPLQP 340
           + Q    I  Q+ +QP
Sbjct: 141 TTQNLPSIQTQQLIQP 156


>06_03_1360 +
           29558789-29559020,29559203-29559378,29560285-29560346,
           29560426-29561212,29561516-29562244
          Length = 661

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 21/67 (31%), Positives = 32/67 (47%)
 Frame = -1

Query: 549 GKEIQREIAKKAKTFVPGGNMPDPKVTNLTPQEIHKIREAIKNASSLQEVERLTRMLQSG 370
           GKEIQR +    K     GN P  K T   PQ  +++   I  +   Q   ++ + +Q+ 
Sbjct: 277 GKEIQRNVGNVEKENPQVGNAPVDKPTQEVPQ--NQLPTQIPQSVQNQLPTQIPQSVQN- 333

Query: 369 QIPGQKP 349
           Q+P Q P
Sbjct: 334 QLPAQIP 340


>03_02_0829 -
           11599665-11600364,11600853-11601076,11601786-11602000,
           11602300-11602377,11602593-11603907
          Length = 843

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = -2

Query: 116 RQXRHKASKEQXQYSXKTWRKLIKDMHA 33
           RQ RH+ SK + Q S    R  +KD+H+
Sbjct: 550 RQLRHQESKAESQMSIDRTRATVKDLHS 577


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,764,885
Number of Sequences: 37544
Number of extensions: 279319
Number of successful extensions: 651
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 636
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 650
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1792053856
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)