Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_pT_L17
         (639 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U29380-14|AAA68746.2|  293|Caenorhabditis elegans Trypsin-like p...    85   5e-17
U58751-11|AAB00662.1|  265|Caenorhabditis elegans Trypsin-like p...    69   2e-12
U70848-2|AAB09110.4|  313|Caenorhabditis elegans Trypsin-like pr...    45   4e-05
AF003384-12|AAB54236.2|  331|Caenorhabditis elegans Trypsin-like...    41   9e-04
U28735-5|AAF99955.3|  279|Caenorhabditis elegans Hypothetical pr...    38   0.005
AL032637-6|CAA21620.2|  422|Caenorhabditis elegans Hypothetical ...    31   0.53 
AF039716-9|AAB96734.2|  548|Caenorhabditis elegans Hypothetical ...    31   0.92 
Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical pr...    30   1.6  
Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical pr...    30   1.6  
Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical p...    30   1.6  
Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical p...    30   1.6  
U23412-5|AAK21467.2|  492|Caenorhabditis elegans Hypothetical pr...    29   2.1  
AL033514-30|CAA22091.1|  313|Caenorhabditis elegans Hypothetical...    28   6.5  

>U29380-14|AAA68746.2|  293|Caenorhabditis elegans Trypsin-like
           protease protein 1 protein.
          Length = 293

 Score = 84.6 bits (200), Expect = 5e-17
 Identities = 57/171 (33%), Positives = 83/171 (48%), Gaps = 4/171 (2%)
 Frame = -3

Query: 571 VKEIVIHKDFNKG-NLXYDIALLFLETPVDSAPNVGVACLP--PARERAPAGVRCFATGW 401
           V  + IH  +N G    YD A++ +  PV+++      CLP  PA E       C  TGW
Sbjct: 127 VTAVSIHPWYNIGFPSSYDFAIMRIHPPVNTSTTARPICLPSLPAVENR----LCVVTGW 182

Query: 400 GKDKFGKEGRYQVIMKKVDVPVVDRNTCQSQLRRTRLGRFFQLHSTFMCAGGEPDK-DTC 224
           G    G       + +++ VP++    C S      +GR      + +CAG    K D+C
Sbjct: 183 GSTIEGSSLSAPTL-REIHVPLLSTLFCSSL--PNYIGRIHL--PSMLCAGYSYGKIDSC 237

Query: 223 RGDGGSPLVCPIDYEKNRYVQYGIVAWGIGCGEDGTPGVYVDVSNLRTWID 71
           +GD G PL+C  D     +   G+V+WGIGC   G PGVY +V +  TWI+
Sbjct: 238 QGDSGGPLMCARD---GHWELTGVVSWGIGCARPGMPGVYGNVHSASTWIN 285


>U58751-11|AAB00662.1|  265|Caenorhabditis elegans Trypsin-like
           protease protein 2 protein.
          Length = 265

 Score = 69.3 bits (162), Expect = 2e-12
 Identities = 44/161 (27%), Positives = 74/161 (45%), Gaps = 2/161 (1%)
 Frame = -3

Query: 523 YDIALLFLETP-VDSAPNVGVACLPPARERAPAGVRCFATGWGKDKFGKEGRYQVIMKKV 347
           +DIA+L +  P ++        CLP        G +C  +GWG        RY   ++  
Sbjct: 116 HDIAILEIPYPGIEFNEYAQPICLPSKDFVYTPGRQCVVSGWGSMGL----RYAERLQAA 171

Query: 346 DVPVVDRNTCQSQLRRTRLGRFFQLHSTFMCAGG-EPDKDTCRGDGGSPLVCPIDYEKNR 170
            +P+++R  C +  +      +  +  +  CAG  E   D+C+GD G P  C    E   
Sbjct: 172 LIPIINRFDCVNSSQI-----YSSMSRSAFCAGYLEGGIDSCQGDSGGPFACR--REDGA 224

Query: 169 YVQYGIVAWGIGCGEDGTPGVYVDVSNLRTWIDDKVAGQGI 47
           +V  G+++WG GC +   PG+Y  V+   +WI   + GQ +
Sbjct: 225 FVLAGVISWGDGCAQKKQPGIYTMVAPYLSWISAIINGQPV 265


>U70848-2|AAB09110.4|  313|Caenorhabditis elegans Trypsin-like
           protease protein 3 protein.
          Length = 313

 Score = 45.2 bits (102), Expect = 4e-05
 Identities = 50/189 (26%), Positives = 75/189 (39%), Gaps = 12/189 (6%)
 Frame = -3

Query: 574 TVKEIVIHKDFNKGNLXYDIALLFLETPVDSAPNVGVACL-----PPARERAPAGVRCFA 410
           +VKE  IH  +N      DIALL + + + S   +   CL        ++     V  + 
Sbjct: 106 SVKEAYIHSGYNNQTADNDIALLRISSDL-SKLGIKPVCLVHDDSKLLKQYKNGVVIGYG 164

Query: 409 TGWGKDKFGKEGRY-QVIMKKVDVPVVDRNTCQSQLRRTRLGRFFQLHSTFMCAGGEPDK 233
              G+D  G+        ++   VP++  + C    R   L    ++    +CAG     
Sbjct: 165 LTLGEDSSGEPKLINSQTLQSTSVPIISDDDCVKTWRFLSL-LSVKITGYQICAGAYL-H 222

Query: 232 DTCRGDGGSPLVCPIDYEKNRYVQYGIVAWGIGCGEDGT------PGVYVDVSNLRTWID 71
            T  GD G PL+  I      YVQ GI ++G   G DG       PGVY  +S    WI 
Sbjct: 223 GTAPGDSGGPLL--IHKSNGEYVQIGITSYGAD-GLDGVIDQGKFPGVYTRISKYVPWIQ 279

Query: 70  DKVAGQGIR 44
             +    +R
Sbjct: 280 GVIGKTSMR 288


>AF003384-12|AAB54236.2|  331|Caenorhabditis elegans Trypsin-like
           protease protein 5 protein.
          Length = 331

 Score = 40.7 bits (91), Expect = 9e-04
 Identities = 36/131 (27%), Positives = 49/131 (37%), Gaps = 1/131 (0%)
 Frame = -3

Query: 520 DIALLFLETPVDSAPNVGVACLPPARE-RAPAGVRCFATGWGKDKFGKEGRYQVIMKKVD 344
           DI +L LE+ +D       ACLP   E    +G    + GWG D  GK G        + 
Sbjct: 177 DIVILELESTIDDVEGANYACLPFLPEVNIQSGANVTSFGWGSDP-GK-GFDNAAFPMIQ 234

Query: 343 VPVVDRNTCQSQLRRTRLGRFFQLHSTFMCAGGEPDKDTCRGDGGSPLVCPIDYEKNRYV 164
           V  +   T  +       G      S   C   E DK+ C GD G  L          ++
Sbjct: 235 VLTLATETLATC--EENWGTSIPFDS--FCTAEEEDKNVCSGDSGGGLTFHQSDSAREFI 290

Query: 163 QYGIVAWGIGC 131
              IV++G  C
Sbjct: 291 -IAIVSYGSDC 300


>U28735-5|AAF99955.3|  279|Caenorhabditis elegans Hypothetical
           protein F48E3.4 protein.
          Length = 279

 Score = 38.3 bits (85), Expect = 0.005
 Identities = 22/52 (42%), Positives = 30/52 (57%), Gaps = 3/52 (5%)
 Frame = -3

Query: 226 CRGDGGSPLVCPIDYEKNRYVQYGIVAWGIG---CGEDGTPGVYVDVSNLRT 80
           C  D G+PL C +D E N+YVQ GIV+   G     ED +  V V+ S ++T
Sbjct: 197 CWDDIGAPLECVLDVENNKYVQVGIVSGLYGREMDKEDNSTMVVVNCSEVQT 248


>AL032637-6|CAA21620.2|  422|Caenorhabditis elegans Hypothetical
           protein Y43F8C.6 protein.
          Length = 422

 Score = 31.5 bits (68), Expect = 0.53
 Identities = 16/39 (41%), Positives = 20/39 (51%)
 Frame = +3

Query: 378 SFPNLSFPQPVAKHLTPAGARSLAGGRHATPTFGAESTG 494
           S P+ S P P + + T AG  +L    HA P  GA  TG
Sbjct: 268 SGPSSSAPGPSSSYSTGAGGGALLSTGHAVPIMGAGGTG 306


>AF039716-9|AAB96734.2|  548|Caenorhabditis elegans Hypothetical
           protein W03G9.7 protein.
          Length = 548

 Score = 30.7 bits (66), Expect = 0.92
 Identities = 13/43 (30%), Positives = 22/43 (51%)
 Frame = -3

Query: 625 GEWXTQNTKEIYPYQDRTVKEIVIHKDFNKGNLXYDIALLFLE 497
           G+W  +  KE   Y+D  V++  + K+ N   + YD A+   E
Sbjct: 151 GQWDDRYLKEKAEYEDAMVRQETVQKELNIARVNYDNAVKIQE 193


>Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical
           protein F53B7.5b protein.
          Length = 2892

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
 Frame = -3

Query: 268 STFMCAGGEPDKDTCRGDGGSPLVCPIDYEKNRY--VQYGIVAWG 140
           S   C+GG+   DTC G+    LVC     K  Y  + +G  A+G
Sbjct: 86  SPLFCSGGQ---DTCEGEMSETLVCGTTTTKEPYSTIVFGTTAYG 127


>Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical
           protein F53B7.5a protein.
          Length = 3095

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
 Frame = -3

Query: 268 STFMCAGGEPDKDTCRGDGGSPLVCPIDYEKNRY--VQYGIVAWG 140
           S   C+GG+   DTC G+    LVC     K  Y  + +G  A+G
Sbjct: 86  SPLFCSGGQ---DTCEGEMSETLVCGTTTTKEPYSTIVFGTTAYG 127


>Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical
           protein F53B7.5b protein.
          Length = 2892

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
 Frame = -3

Query: 268 STFMCAGGEPDKDTCRGDGGSPLVCPIDYEKNRY--VQYGIVAWG 140
           S   C+GG+   DTC G+    LVC     K  Y  + +G  A+G
Sbjct: 86  SPLFCSGGQ---DTCEGEMSETLVCGTTTTKEPYSTIVFGTTAYG 127


>Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical
           protein F53B7.5a protein.
          Length = 3095

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
 Frame = -3

Query: 268 STFMCAGGEPDKDTCRGDGGSPLVCPIDYEKNRY--VQYGIVAWG 140
           S   C+GG+   DTC G+    LVC     K  Y  + +G  A+G
Sbjct: 86  SPLFCSGGQ---DTCEGEMSETLVCGTTTTKEPYSTIVFGTTAYG 127


>U23412-5|AAK21467.2|  492|Caenorhabditis elegans Hypothetical
           protein T10F2.4 protein.
          Length = 492

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 13/36 (36%), Positives = 22/36 (61%)
 Frame = +2

Query: 41  VSYPLXGDLVVDPGPQVRNVHVNSWSAVLSAADAPG 148
           +S+ + G  +   G +V+ +HV SWS V+S +D  G
Sbjct: 429 LSFDMTGTFLGIGGQKVQVLHVKSWSEVVSLSDHSG 464


>AL033514-30|CAA22091.1|  313|Caenorhabditis elegans Hypothetical
           protein Y75B8A.31 protein.
          Length = 313

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 15/56 (26%), Positives = 30/56 (53%), Gaps = 4/56 (7%)
 Frame = -3

Query: 589 PYQDRTVKE----IVIHKDFNKGNLXYDIALLFLETPVDSAPNVGVACLPPARERA 434
           PY +R ++     +V++ + N+     D  L +  TPV+ A  V +AC+ P+  ++
Sbjct: 119 PYIERAIENGWGVVVMNTNLNESK---DQDLKYSRTPVEHAETVWIACIEPSNAKS 171


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,650,622
Number of Sequences: 27780
Number of extensions: 243292
Number of successful extensions: 764
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 698
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 759
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1416829972
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)