Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_pT_L16
         (655 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY047500-1|AAK77232.1|  607|Drosophila melanogaster GH01133p pro...    31   1.4  
AE014297-3831|AAF56488.1|  607|Drosophila melanogaster CG5053-PA...    31   1.4  
L14644-1|AAB88625.1| 2895|Drosophila melanogaster hyperplastic d...    29   7.3  

>AY047500-1|AAK77232.1|  607|Drosophila melanogaster GH01133p
           protein.
          Length = 607

 Score = 31.1 bits (67), Expect = 1.4
 Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
 Frame = +2

Query: 437 HGNLNMNEHIKDNL-KTFDE*RKSKPYVTYKHQNKNYINN 553
           + N + N+HI   L K+ +E R+S P   Y + N N +NN
Sbjct: 233 NNNSSSNQHIYSQLSKSSNELRRSSPNEMYYNNNNNIVNN 272


>AE014297-3831|AAF56488.1|  607|Drosophila melanogaster CG5053-PA
           protein.
          Length = 607

 Score = 31.1 bits (67), Expect = 1.4
 Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
 Frame = +2

Query: 437 HGNLNMNEHIKDNL-KTFDE*RKSKPYVTYKHQNKNYINN 553
           + N + N+HI   L K+ +E R+S P   Y + N N +NN
Sbjct: 233 NNNSSSNQHIYSQLSKSSNELRRSSPNEMYYNNNNNIVNN 272


>L14644-1|AAB88625.1| 2895|Drosophila melanogaster hyperplastic discs
            protein protein.
          Length = 2895

 Score = 28.7 bits (61), Expect = 7.3
 Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
 Frame = +2

Query: 476  LKTFDE*RKSKPYVTYKHQNK-NYINNVKKKHYISCH 583
            LKT D    +     Y+ QNK N I+N+K +H  +C+
Sbjct: 2240 LKTIDSDINNYRLQIYRPQNKPNVIHNIKSQHQTTCY 2276


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,251,721
Number of Sequences: 53049
Number of extensions: 344762
Number of successful extensions: 805
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 785
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 805
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2786177250
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)