Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P17_pT_L12
(528 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 282 1e-76
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 282 1e-76
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 282 1e-76
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 282 1e-76
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 282 1e-76
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 282 1e-76
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 281 2e-76
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 281 2e-76
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 281 2e-76
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 275 1e-74
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 268 1e-72
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 147 4e-36
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 127 6e-30
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 116 8e-27
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 101 3e-22
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 90 1e-18
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 75 3e-14
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 75 3e-14
U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical pr... 48 4e-06
U39652-2|AAA80404.1| 817|Caenorhabditis elegans Hypothetical pr... 29 2.1
AF100306-10|AAC68926.1| 798|Caenorhabditis elegans Hypothetical... 29 2.7
AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical ... 27 6.3
Z75545-1|CAB61025.1| 665|Caenorhabditis elegans Hypothetical pr... 27 8.3
AB000913-1|BAA21715.1| 665|Caenorhabditis elegans UNC-14 protein. 27 8.3
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 282 bits (691), Expect = 1e-76
Identities = 129/139 (92%), Positives = 134/139 (96%)
Frame = -1
Query: 528 EKSYELPDGQVITIGNERFRCPEALFQPSXXGMESCGIHETVYNSIMKCDVDIRKDLYAN 349
EKSYELPDGQVIT+GNERFRCPEALFQPS GMES GIHET YNSIMKCD+DIRKDLYAN
Sbjct: 238 EKSYELPDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYAN 297
Query: 348 TVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMW 169
TV+SGGTTMYPGIADRMQKEITALAPST+KIKIIAPPERKYSVWIGGSILASLSTFQQMW
Sbjct: 298 TVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMW 357
Query: 168 ISKEEYDESGPGIVHRKCF 112
ISK+EYDESGP IVHRKCF
Sbjct: 358 ISKQEYDESGPSIVHRKCF 376
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 282 bits (691), Expect = 1e-76
Identities = 129/139 (92%), Positives = 134/139 (96%)
Frame = -1
Query: 528 EKSYELPDGQVITIGNERFRCPEALFQPSXXGMESCGIHETVYNSIMKCDVDIRKDLYAN 349
EKSYELPDGQVIT+GNERFRCPEALFQPS GMES GIHET YNSIMKCD+DIRKDLYAN
Sbjct: 238 EKSYELPDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYAN 297
Query: 348 TVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMW 169
TV+SGGTTMYPGIADRMQKEITALAPST+KIKIIAPPERKYSVWIGGSILASLSTFQQMW
Sbjct: 298 TVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMW 357
Query: 168 ISKEEYDESGPGIVHRKCF 112
ISK+EYDESGP IVHRKCF
Sbjct: 358 ISKQEYDESGPSIVHRKCF 376
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 282 bits (691), Expect = 1e-76
Identities = 129/139 (92%), Positives = 134/139 (96%)
Frame = -1
Query: 528 EKSYELPDGQVITIGNERFRCPEALFQPSXXGMESCGIHETVYNSIMKCDVDIRKDLYAN 349
EKSYELPDGQVIT+GNERFRCPEALFQPS GMES GIHET YNSIMKCD+DIRKDLYAN
Sbjct: 238 EKSYELPDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYAN 297
Query: 348 TVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMW 169
TV+SGGTTMYPGIADRMQKEITALAPST+KIKIIAPPERKYSVWIGGSILASLSTFQQMW
Sbjct: 298 TVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMW 357
Query: 168 ISKEEYDESGPGIVHRKCF 112
ISK+EYDESGP IVHRKCF
Sbjct: 358 ISKQEYDESGPSIVHRKCF 376
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 282 bits (691), Expect = 1e-76
Identities = 129/139 (92%), Positives = 134/139 (96%)
Frame = -1
Query: 528 EKSYELPDGQVITIGNERFRCPEALFQPSXXGMESCGIHETVYNSIMKCDVDIRKDLYAN 349
EKSYELPDGQVIT+GNERFRCPEALFQPS GMES GIHET YNSIMKCD+DIRKDLYAN
Sbjct: 194 EKSYELPDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYAN 253
Query: 348 TVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMW 169
TV+SGGTTMYPGIADRMQKEITALAPST+KIKIIAPPERKYSVWIGGSILASLSTFQQMW
Sbjct: 254 TVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMW 313
Query: 168 ISKEEYDESGPGIVHRKCF 112
ISK+EYDESGP IVHRKCF
Sbjct: 314 ISKQEYDESGPSIVHRKCF 332
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 282 bits (691), Expect = 1e-76
Identities = 129/139 (92%), Positives = 134/139 (96%)
Frame = -1
Query: 528 EKSYELPDGQVITIGNERFRCPEALFQPSXXGMESCGIHETVYNSIMKCDVDIRKDLYAN 349
EKSYELPDGQVIT+GNERFRCPEALFQPS GMES GIHET YNSIMKCD+DIRKDLYAN
Sbjct: 224 EKSYELPDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYAN 283
Query: 348 TVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMW 169
TV+SGGTTMYPGIADRMQKEITALAPST+KIKIIAPPERKYSVWIGGSILASLSTFQQMW
Sbjct: 284 TVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMW 343
Query: 168 ISKEEYDESGPGIVHRKCF 112
ISK+EYDESGP IVHRKCF
Sbjct: 344 ISKQEYDESGPSIVHRKCF 362
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 282 bits (691), Expect = 1e-76
Identities = 129/139 (92%), Positives = 134/139 (96%)
Frame = -1
Query: 528 EKSYELPDGQVITIGNERFRCPEALFQPSXXGMESCGIHETVYNSIMKCDVDIRKDLYAN 349
EKSYELPDGQVIT+GNERFRCPEALFQPS GMES GIHET YNSIMKCD+DIRKDLYAN
Sbjct: 238 EKSYELPDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYAN 297
Query: 348 TVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMW 169
TV+SGGTTMYPGIADRMQKEITALAPST+KIKIIAPPERKYSVWIGGSILASLSTFQQMW
Sbjct: 298 TVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMW 357
Query: 168 ISKEEYDESGPGIVHRKCF 112
ISK+EYDESGP IVHRKCF
Sbjct: 358 ISKQEYDESGPSIVHRKCF 376
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 281 bits (689), Expect = 2e-76
Identities = 128/139 (92%), Positives = 134/139 (96%)
Frame = -1
Query: 528 EKSYELPDGQVITIGNERFRCPEALFQPSXXGMESCGIHETVYNSIMKCDVDIRKDLYAN 349
EKSYELPDGQVIT+GNERFRCPEA+FQPS GMES GIHET YNSIMKCD+DIRKDLYAN
Sbjct: 238 EKSYELPDGQVITVGNERFRCPEAMFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYAN 297
Query: 348 TVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMW 169
TV+SGGTTMYPGIADRMQKEITALAPST+KIKIIAPPERKYSVWIGGSILASLSTFQQMW
Sbjct: 298 TVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMW 357
Query: 168 ISKEEYDESGPGIVHRKCF 112
ISK+EYDESGP IVHRKCF
Sbjct: 358 ISKQEYDESGPSIVHRKCF 376
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 281 bits (689), Expect = 2e-76
Identities = 128/139 (92%), Positives = 134/139 (96%)
Frame = -1
Query: 528 EKSYELPDGQVITIGNERFRCPEALFQPSXXGMESCGIHETVYNSIMKCDVDIRKDLYAN 349
EKSYELPDGQVIT+GNERFRCPEA+FQPS GMES GIHET YNSIMKCD+DIRKDLYAN
Sbjct: 238 EKSYELPDGQVITVGNERFRCPEAMFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYAN 297
Query: 348 TVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMW 169
TV+SGGTTMYPGIADRMQKEITALAPST+KIKIIAPPERKYSVWIGGSILASLSTFQQMW
Sbjct: 298 TVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMW 357
Query: 168 ISKEEYDESGPGIVHRKCF 112
ISK+EYDESGP IVHRKCF
Sbjct: 358 ISKQEYDESGPSIVHRKCF 376
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 281 bits (689), Expect = 2e-76
Identities = 128/139 (92%), Positives = 134/139 (96%)
Frame = -1
Query: 528 EKSYELPDGQVITIGNERFRCPEALFQPSXXGMESCGIHETVYNSIMKCDVDIRKDLYAN 349
EKSYELPDGQVIT+GNERFRCPEA+FQPS GMES GIHET YNSIMKCD+DIRKDLYAN
Sbjct: 238 EKSYELPDGQVITVGNERFRCPEAMFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYAN 297
Query: 348 TVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMW 169
TV+SGGTTMYPGIADRMQKEITALAPST+KIKIIAPPERKYSVWIGGSILASLSTFQQMW
Sbjct: 298 TVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMW 357
Query: 168 ISKEEYDESGPGIVHRKCF 112
ISK+EYDESGP IVHRKCF
Sbjct: 358 ISKQEYDESGPSIVHRKCF 376
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 275 bits (674), Expect = 1e-74
Identities = 127/139 (91%), Positives = 133/139 (95%)
Frame = -1
Query: 528 EKSYELPDGQVITIGNERFRCPEALFQPSXXGMESCGIHETVYNSIMKCDVDIRKDLYAN 349
EKSYELPDGQVIT+GNERFRCPEA+FQPS GMES GIHET YNSIMKCD+DIRKDLYAN
Sbjct: 238 EKSYELPDGQVITVGNERFRCPEAMFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYAN 297
Query: 348 TVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMW 169
TV+SGGTTMYPGIADRMQKEITALAP T+KIKIIAPPERKYSVWIGGSILASLSTFQQMW
Sbjct: 298 TVLSGGTTMYPGIADRMQKEITALAP-TMKIKIIAPPERKYSVWIGGSILASLSTFQQMW 356
Query: 168 ISKEEYDESGPGIVHRKCF 112
ISK+EYDESGP IVHRKCF
Sbjct: 357 ISKQEYDESGPSIVHRKCF 375
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 268 bits (658), Expect = 1e-72
Identities = 123/139 (88%), Positives = 129/139 (92%)
Frame = -1
Query: 528 EKSYELPDGQVITIGNERFRCPEALFQPSXXGMESCGIHETVYNSIMKCDVDIRKDLYAN 349
EKSYELPDGQVITIGNERFRCPE LFQP+ GME GIHET Y SIMKCDVDIRKDLYAN
Sbjct: 237 EKSYELPDGQVITIGNERFRCPEVLFQPAFIGMEGAGIHETTYQSIMKCDVDIRKDLYAN 296
Query: 348 TVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMW 169
TV+SGGT+M+PGIADRMQKEI LAPST+KIKIIAPPERKYSVWIGGSILASLSTFQQMW
Sbjct: 297 TVLSGGTSMFPGIADRMQKEIQHLAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMW 356
Query: 168 ISKEEYDESGPGIVHRKCF 112
ISK+EYDESGP IVHRKCF
Sbjct: 357 ISKQEYDESGPSIVHRKCF 375
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 147 bits (357), Expect = 4e-36
Identities = 68/139 (48%), Positives = 92/139 (66%)
Frame = -1
Query: 528 EKSYELPDGQVITIGNERFRCPEALFQPSXXGMESCGIHETVYNSIMKCDVDIRKDLYAN 349
+ SY LPD I I N FR PE LF+P G E G+ V SIMKCDVD+R+ LY+N
Sbjct: 236 KSSYALPDTTKIEISNSLFRAPEVLFKPDLIGTEWPGMAHVVNQSIMKCDVDLRQTLYSN 295
Query: 348 TVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMW 169
V+SGGTT++ G DR+ E+ +AP+ KI+I A ER WIGGSI+ASL TF++MW
Sbjct: 296 IVLSGGTTLFKGFGDRLLGEMRKIAPADGKIRISASQERNSLTWIGGSIVASLDTFRKMW 355
Query: 168 ISKEEYDESGPGIVHRKCF 112
+ K+EY++ G +H++ F
Sbjct: 356 LGKKEYEDMGASAMHKRFF 374
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 127 bits (306), Expect = 6e-30
Identities = 63/142 (44%), Positives = 87/142 (61%), Gaps = 13/142 (9%)
Frame = -1
Query: 525 KSYELPDGQVITIGNERFRCPEALFQPSXXGMESCGIHETVYNSIMKCDVDIRKDLYANT 346
+ Y LPDG+VI +G ERF PE LFQP +E G+ E ++ I D+D R D Y +
Sbjct: 242 QQYTLPDGRVIRLGGERFEAPEILFQPHLINVEKAGLSELLFGCIQASDIDTRLDFYKHI 301
Query: 345 VMSGGTTMYPGIADRMQKEITAL-----------APSTIKIKIIAPPERKYSVWIGGSIL 199
V+SGGTTMYPG+ R++KE+ L A KI+I APP RK+ V++GG++L
Sbjct: 302 VLSGGTTMYPGLPSRLEKELKQLYLDRVLHGNTDAFQKFKIRIEAPPSRKHMVFLGGAVL 361
Query: 198 ASL--STFQQMWISKEEYDESG 139
A+L Q W+SK+EY+E G
Sbjct: 362 ANLMKDRDQDFWVSKKEYEEGG 383
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 116 bits (280), Expect = 8e-27
Identities = 59/143 (41%), Positives = 78/143 (54%), Gaps = 8/143 (5%)
Frame = -1
Query: 519 YELPDGQVITIGNERFRCPEALFQPSXXGMES-----CGIHETVYNSIMKCDVDIRKDLY 355
Y P+G G ER + PE LF E + + S D+DIR L+
Sbjct: 293 YAFPNGYTKEFGAERIKLPECLFDLGYLKAEGKKDGLMTVAQMAAASANLADIDIRPTLF 352
Query: 354 ANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPP---ERKYSVWIGGSILASLST 184
+N ++GG ++ G +R+ + P TIK+++ A P ERKY WIGGSIL SL T
Sbjct: 353 SNVTVTGGNSLILGFTERLNYALATKCPPTIKLRVFAAPTQAERKYGAWIGGSILGSLGT 412
Query: 183 FQQMWISKEEYDESGPGIVHRKC 115
FQQMW+SK EYDESG IV +KC
Sbjct: 413 FQQMWVSKAEYDESGKSIVEKKC 435
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 101 bits (242), Expect = 3e-22
Identities = 40/112 (35%), Positives = 75/112 (66%)
Frame = -1
Query: 489 IGNERFRCPEALFQPSXXGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGI 310
I N RF C E LF+P G+++ G+H+ ++ +I++C +D R+ LY N ++GG ++ PGI
Sbjct: 428 IDNSRFLCTEGLFKPKKWGLDTKGLHQLIHEAILQCPIDSRRTLYRNIYLAGGASLMPGI 487
Query: 309 ADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEE 154
A+++++E++ + P+TI ++ P R + ++G I+AS STF+ IS ++
Sbjct: 488 AEKLEQELSTVVPNTIHTQVNISPWRYNAAYLGAQIVASASTFEDSCISLQQ 539
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 89.8 bits (213), Expect = 1e-18
Identities = 49/139 (35%), Positives = 77/139 (55%), Gaps = 17/139 (12%)
Frame = -1
Query: 495 ITIGNERFRCPEALFQPSXXGME-SCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMY 319
+ +G ERF PE F P E + I +T+ I +C +D+R+ LY N V+SGG+TM+
Sbjct: 276 VDVGYERFLGPEIFFHPEFCNPEFTTPISDTIDTLIQQCPIDVRRGLYENIVLSGGSTMF 335
Query: 318 PGIADRMQKEITALA----------------PSTIKIKIIAPPERKYSVWIGGSILASLS 187
A ++Q+++ L+ P I +++I+ ++Y+VW GGS+LAS S
Sbjct: 336 KDFARKLQRDVKRLSDGRLQMSETLSGGRLKPKPIDVQVISHKMQRYAVWFGGSMLASTS 395
Query: 186 TFQQMWISKEEYDESGPGI 130
F Q+ +K EY E GP I
Sbjct: 396 EFYQVSHTKAEYMERGPSI 414
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 74.9 bits (176), Expect = 3e-14
Identities = 38/125 (30%), Positives = 69/125 (55%), Gaps = 3/125 (2%)
Frame = -1
Query: 495 ITIGNERFRCPEALFQPSXXGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYP 316
I +G ERF PE LF PS ++ CG+ E V SI +C +R L N ++ GG++ +P
Sbjct: 263 IHLGVERFAIPEILFNPSDIDIDQCGVAEAVIESICQCPEALRPALAENIIVIGGSSCFP 322
Query: 315 GIADRMQKEITALAPSTIKIKI---IAPPERKYSVWIGGSILASLSTFQQMWISKEEYDE 145
G +R+++E+ ++ P+ + + + P+ W G L L+ + WI+++++DE
Sbjct: 323 GFRERLEREVRSMLPAEYGLNVSNDVINPQT--HSWHCGQEL--LTASKVPWINRKDWDE 378
Query: 144 SGPGI 130
G +
Sbjct: 379 RGDSL 383
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 74.9 bits (176), Expect = 3e-14
Identities = 38/125 (30%), Positives = 69/125 (55%), Gaps = 3/125 (2%)
Frame = -1
Query: 495 ITIGNERFRCPEALFQPSXXGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYP 316
I +G ERF PE LF PS ++ CG+ E V SI +C +R L N ++ GG++ +P
Sbjct: 263 IHLGVERFAIPEILFNPSDIDIDQCGVAEAVIESICQCPEALRPALAENIIVIGGSSCFP 322
Query: 315 GIADRMQKEITALAPSTIKIKI---IAPPERKYSVWIGGSILASLSTFQQMWISKEEYDE 145
G +R+++E+ ++ P+ + + + P+ W G L L+ + WI+++++DE
Sbjct: 323 GFRERLEREVRSMLPAEYGLNVSNDVINPQT--HSWHCGQEL--LTASKVPWINRKDWDE 378
Query: 144 SGPGI 130
G +
Sbjct: 379 RGDSL 383
>U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical
protein C49H3.8 protein.
Length = 305
Score = 48.0 bits (109), Expect = 4e-06
Identities = 28/95 (29%), Positives = 53/95 (55%), Gaps = 10/95 (10%)
Frame = -1
Query: 405 VYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITAL-APSTIKIKIIAP---- 241
++ + KC +D+RK L+ N +++GG + PG+ R+++EI + + KI +I
Sbjct: 194 LHKLVSKCPIDLRKKLFPNILLTGGVSTIPGLMKRLEQEIQVIDEKNNSKIAVIVKFYQF 253
Query: 240 PERK----YSVWIGGSILASL-STFQQMWISKEEY 151
E K + W+G S+L SL T ++ ++ EE+
Sbjct: 254 SEIKNTPLFVSWLGASLLGSLRETIERKSLTLEEW 288
>U39652-2|AAA80404.1| 817|Caenorhabditis elegans Hypothetical
protein R07E4.5 protein.
Length = 817
Score = 29.1 bits (62), Expect = 2.1
Identities = 16/48 (33%), Positives = 18/48 (37%)
Frame = -3
Query: 418 HPRDRVQLHHEVRRRHP*GPVRQHRHVRWYHHVPRYRRQDAEGDHRPR 275
HP + HH+ H PV HR R H Q A RPR
Sbjct: 769 HPHHQQMPHHQPHLHHAHHPVHPHRGPRASHSQHLQHGQYAHHTQRPR 816
>AF100306-10|AAC68926.1| 798|Caenorhabditis elegans Hypothetical
protein T24C4.7 protein.
Length = 798
Score = 28.7 bits (61), Expect = 2.7
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = -3
Query: 319 PRYRRQDAEGDHRPRALDHQDQDHRSPREEVLR 221
P+YRRQ L Q Q HR PRE +L+
Sbjct: 181 PKYRRQVMHCSKSEHKLVLQTQKHRLPRERMLK 213
>AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical
protein Y39B6A.1 protein.
Length = 735
Score = 27.5 bits (58), Expect = 6.3
Identities = 17/66 (25%), Positives = 21/66 (31%)
Frame = -3
Query: 394 HHEVRRRHP*GPVRQHRHVRWYHHVPRYRRQDAEGDHRPRALDHQDQDHRSPREEVLRMD 215
HH H G H H HH P + E H P H + H +P +
Sbjct: 432 HHHAPAHH--GHHESHGHG---HHSPAHHGHHGEHHHAPAHHGHHGEHHHAPAHHGHHGE 486
Query: 214 RWIHPG 197
H G
Sbjct: 487 HGTHHG 492
>Z75545-1|CAB61025.1| 665|Caenorhabditis elegans Hypothetical
protein K10D3.2 protein.
Length = 665
Score = 27.1 bits (57), Expect = 8.3
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = -3
Query: 277 RALDHQDQDHRSPREEVLRMDRW 209
R +D D + R EE++R DRW
Sbjct: 134 RFVDVNDNEIREANEEIIRKDRW 156
>AB000913-1|BAA21715.1| 665|Caenorhabditis elegans UNC-14 protein.
Length = 665
Score = 27.1 bits (57), Expect = 8.3
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = -3
Query: 277 RALDHQDQDHRSPREEVLRMDRW 209
R +D D + R EE++R DRW
Sbjct: 134 RFVDVNDNEIREANEEIIRKDRW 156
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,859,522
Number of Sequences: 27780
Number of extensions: 215595
Number of successful extensions: 700
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 652
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 693
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1038911524
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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