Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_pT_L08
         (675 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q7RII5 Cluster: Putative uncharacterized protein PY0363...    35   1.6  
UniRef50_A7SGK3 Cluster: Predicted protein; n=1; Nematostella ve...    35   1.6  
UniRef50_A0Q1M8 Cluster: Serine proteases, subtilase family; n=1...    34   2.7  
UniRef50_Q4YIH8 Cluster: Putative uncharacterized protein; n=1; ...    34   2.7  
UniRef50_Q66DN6 Cluster: (AJ251712) O-unit polymerase-like prote...    34   3.6  
UniRef50_A4BYL9 Cluster: Polysaccharide transport protein, putat...    33   4.8  
UniRef50_Q97PC4 Cluster: ABC transporter, ATP-binding protein; n...    33   8.4  
UniRef50_Q9LP59 Cluster: F-box/Kelch-repeat protein At1g48625; n...    33   8.4  

>UniRef50_Q7RII5 Cluster: Putative uncharacterized protein PY03638;
           n=5; Plasmodium|Rep: Putative uncharacterized protein
           PY03638 - Plasmodium yoelii yoelii
          Length = 210

 Score = 35.1 bits (77), Expect = 1.6
 Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
 Frame = -3

Query: 595 SFFSLRIVDINYFLTCTKFQILFFGTEVFN*NLSLNQLRYMKAVRDR*ISNVRFAT--VI 422
           SF SL+IVD N F+T  K+ I     E+ + N+ L+  +Y +    R I   R AT  ++
Sbjct: 19  SFISLKIVDNNCFITHRKY-ISVLANELRSGNIFLHNDKYCEVTEQRQIKQGRLATTNMV 77

Query: 421 ARLLPICSFAAIQ 383
           ++++ +     I+
Sbjct: 78  SKIMAVLEMPKIE 90


>UniRef50_A7SGK3 Cluster: Predicted protein; n=1; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 304

 Score = 35.1 bits (77), Expect = 1.6
 Identities = 13/49 (26%), Positives = 27/49 (55%)
 Frame = +1

Query: 343 RMKYNMIIIRVYCFVLRRNYRLVTTGRLRSQIARLRFNDRGPPSYNATD 489
           R KY+ +++ ++  +L R ++ V +G  R+      F +  PP +N +D
Sbjct: 16  RNKYDAVVVAIHACLLDREFKCVASGNQRNPSDEFDFGEMLPPDWNQSD 64


>UniRef50_A0Q1M8 Cluster: Serine proteases, subtilase family; n=1;
            Clostridium novyi NT|Rep: Serine proteases, subtilase
            family - Clostridium novyi (strain NT)
          Length = 1180

 Score = 34.3 bits (75), Expect = 2.7
 Identities = 28/92 (30%), Positives = 40/92 (43%), Gaps = 5/92 (5%)
 Frame = +3

Query: 210  ENRKYTITFRFSRYKLNIKNIAI*IDNSMNIEEKKNTNAVL-SRVSNEI*YDNY*SLLFC 386
            +NR YT+ F+ +     IKN  I ++N    +E  NT   L + V NE          +C
Sbjct: 833  DNRNYTLRFKANENLSGIKNFKIKVNNDFYKDENNNTELKLKTNVKNE----------YC 882

Query: 387  IAAKLQIGNNRAITV----ANRTFEIQRSRTA 470
            +  KL  G N  +      A  T E+  S TA
Sbjct: 883  VNLKLLDGKNNVVIYGTDNAGNTSELPMSITA 914


>UniRef50_Q4YIH8 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium berghei|Rep: Putative uncharacterized protein
           - Plasmodium berghei
          Length = 57

 Score = 34.3 bits (75), Expect = 2.7
 Identities = 19/49 (38%), Positives = 26/49 (53%)
 Frame = -3

Query: 355 YISFETRDKTAFVFFFSSIFMELSIYIAIFLMFNLYRENLNVIVYFRFS 209
           YI F+T  K  F F +   F+ L + I IF +F     NL + VYF F+
Sbjct: 9   YILFDTIKKLYFFFIYFCTFLILFM-IFIFFIFPYIETNLELFVYFTFA 56


>UniRef50_Q66DN6 Cluster: (AJ251712) O-unit polymerase-like protein
           [Yersinia pse; n=6; Yersinia|Rep: (AJ251712) O-unit
           polymerase-like protein [Yersinia pse - Yersinia
           pseudotuberculosis
          Length = 406

 Score = 33.9 bits (74), Expect = 3.6
 Identities = 20/62 (32%), Positives = 36/62 (58%)
 Frame = -3

Query: 358 YYISFETRDKTAFVFFFSSIFMELSIYIAIFLMFNLYRENLNVIVYFRFSIF*GFIATSS 179
           YY+ FE+R   AF+  F S F+ + + + IF + +   +N+N++++    IF   + TSS
Sbjct: 316 YYVLFESRVSDAFLSLFLSFFLCVVLSV-IFKVLSKNNQNINLLIF--IMIF-SLLYTSS 371

Query: 178 TE 173
            E
Sbjct: 372 NE 373


>UniRef50_A4BYL9 Cluster: Polysaccharide transport protein,
           putative; n=1; Polaribacter irgensii 23-P|Rep:
           Polysaccharide transport protein, putative -
           Polaribacter irgensii 23-P
          Length = 499

 Score = 33.5 bits (73), Expect = 4.8
 Identities = 36/106 (33%), Positives = 54/106 (50%), Gaps = 1/106 (0%)
 Frame = -3

Query: 589 FSLRIVDINYFLTCTKFQILFFGTEVFN*NLSLNQLRYMKAVRDR*ISNVRFATVIARLL 410
           F L  + + ++LT  +F IL FG+E+    LS+NQ+    A+ +  IS    + V A   
Sbjct: 18  FQLITILVGFYLT--RFIILNFGSELNGLMLSINQILNYFALVEGGISG---SIVYALYK 72

Query: 409 PICSFAAIQNNKL**LSYYISFETRDKTAFVF-FFSSIFMELSIYI 275
           P+     I  NKL  L    S+ T  K  F F FF+ I++ LS Y+
Sbjct: 73  PLYDNDKISINKL--LGTSKSYLT--KAGFTFLFFTIIYILLSAYL 114


>UniRef50_Q97PC4 Cluster: ABC transporter, ATP-binding protein;
           n=51; Firmicutes|Rep: ABC transporter, ATP-binding
           protein - Streptococcus pneumoniae
          Length = 492

 Score = 32.7 bits (71), Expect = 8.4
 Identities = 27/65 (41%), Positives = 34/65 (52%), Gaps = 7/65 (10%)
 Frame = -3

Query: 364 LSYYISF-ETRDKTAFV----FFFSSIFMELSIYIAIFL--MFNLYRENLNVIVYFRFSI 206
           LSY I+F ET     F+    F  ++I   L IY+AI +  +FN YR  L V VY    I
Sbjct: 373 LSYVITFVETHLPQIFLTGISFLLNTISGILCIYLAISIGQLFNEYRTALAVAVYIGIQI 432

Query: 205 F*GFI 191
             GFI
Sbjct: 433 VIGFI 437


>UniRef50_Q9LP59 Cluster: F-box/Kelch-repeat protein At1g48625; n=9;
           Arabidopsis thaliana|Rep: F-box/Kelch-repeat protein
           At1g48625 - Arabidopsis thaliana (Mouse-ear cress)
          Length = 409

 Score = 32.7 bits (71), Expect = 8.4
 Identities = 11/34 (32%), Positives = 21/34 (61%)
 Frame = -1

Query: 366 NYHIIFHSKHATRPHSCFFFLQYSWSYQFI*QYF 265
           NY + + +K++ R H    F+ Y W+Y+ + Q+F
Sbjct: 150 NYSLGYENKNSCRSHKLLRFIDYHWNYRGLHQFF 183


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 571,006,209
Number of Sequences: 1657284
Number of extensions: 10517028
Number of successful extensions: 22714
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 21643
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22676
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 52066120554
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)