Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_pT_L08
         (675 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    25   0.50 
DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    24   1.5  

>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 25.4 bits (53), Expect = 0.50
 Identities = 9/31 (29%), Positives = 18/31 (58%)
 Frame = +3

Query: 261 IKNIAI*IDNSMNIEEKKNTNAVLSRVSNEI 353
           +  + I  DNS  + +KK  N ++ R+ N++
Sbjct: 75  LNQLEIESDNSKEVNDKKEENFIVDRLRNDL 105


>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 18/70 (25%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
 Frame = -1

Query: 531 YFLELRYLIKIYH*ISCVI*RRSAIVE-SQTCDLRP*SPGCYQSVVSPQYKTINSNNYHI 355
           +FL +  ++ +Y  ISCVI  R   +E +++ ++RP      ++V+  + K+I +     
Sbjct: 207 FFLPMLVMLYVYGRISCVIASRHRNLEATESENVRP-----RRNVLIERAKSIRARRTEC 261

Query: 354 IFHSKHATRP 325
           + +S    RP
Sbjct: 262 VTNSVTCDRP 271


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 175,131
Number of Sequences: 438
Number of extensions: 3766
Number of successful extensions: 3
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20464920
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)