Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_pT_L04
         (374 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    23   1.3  
Z69735-1|CAA93623.1|  162|Tribolium castaneum initiation factor ...    20   7.2  
AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle pr...    20   7.2  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    20   9.5  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    20   9.5  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    20   9.5  

>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 22.6 bits (46), Expect = 1.3
 Identities = 9/25 (36%), Positives = 12/25 (48%)
 Frame = +3

Query: 63  STVTQCCRPLNFRSMLVQQRLCFLP 137
           ST    CR   FR+   +  +CF P
Sbjct: 383 STTANSCRSSTFRNNRDEYNVCFRP 407


>Z69735-1|CAA93623.1|  162|Tribolium castaneum initiation factor
           5-like protein protein.
          Length = 162

 Score = 20.2 bits (40), Expect = 7.2
 Identities = 7/17 (41%), Positives = 9/17 (52%)
 Frame = +1

Query: 115 SSGCASCRYSR*AETEH 165
           S GC +C Y    E+ H
Sbjct: 33  SQGCKACGYHSPLESNH 49


>AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle
           protein.
          Length = 361

 Score = 20.2 bits (40), Expect = 7.2
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +2

Query: 164 MGATNGVNRPPVPYI 208
           MG T G   PP PY+
Sbjct: 8   MGHTGGGLMPPQPYM 22


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 19.8 bits (39), Expect = 9.5
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = +2

Query: 314 LRKFRVRLFNTRIRFRINSF 373
           L+   +RL NT+++F    F
Sbjct: 372 LQLVAIRLLNTKLQFTAKDF 391


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 19.8 bits (39), Expect = 9.5
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = +2

Query: 314 LRKFRVRLFNTRIRFRINSF 373
           L+   +RL NT+++F    F
Sbjct: 328 LQLVAIRLLNTKLQFTAKDF 347


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like protein
            protein.
          Length = 1156

 Score = 19.8 bits (39), Expect = 9.5
 Identities = 10/30 (33%), Positives = 18/30 (60%)
 Frame = -2

Query: 184  DSISGSHARFQLSGNSGRKHSRCCTSILRK 95
            DS+SG++    L+ + G+K S    + L+K
Sbjct: 967  DSLSGNNTGDALAPSGGKKGSSHPLAALQK 996


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 77,702
Number of Sequences: 336
Number of extensions: 1535
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  7828090
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)