Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_pT_L02
         (433 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC025726-14|AAK73912.2|  508|Caenorhabditis elegans Hypothetical...    29   1.4  
AC087079-16|AAO12401.2|  509|Caenorhabditis elegans Hypothetical...    27   5.8  

>AC025726-14|AAK73912.2|  508|Caenorhabditis elegans Hypothetical
           protein Y71G12B.13 protein.
          Length = 508

 Score = 29.1 bits (62), Expect = 1.4
 Identities = 14/34 (41%), Positives = 21/34 (61%)
 Frame = -2

Query: 153 DGVTYTVTFVADEDGYQPRNRARSRRSCTVSNTS 52
           DG T T T ++++   Q R +A S  S TV+NT+
Sbjct: 124 DGTTTTTTTISEKSSGQNRLKAESLHSETVNNTN 157


>AC087079-16|AAO12401.2|  509|Caenorhabditis elegans Hypothetical
           protein Y37E3.16 protein.
          Length = 509

 Score = 27.1 bits (57), Expect = 5.8
 Identities = 11/44 (25%), Positives = 21/44 (47%)
 Frame = +1

Query: 283 VHYAHFRSWLAEPHQVDGKRQLFPPNTMLITISFSIGFRSLFSI 414
           + +A F  WLA+P     +++  P +   +  +  I    +FSI
Sbjct: 379 ISFARFGLWLADPAITQIQQETIPESQRYMAFTVQIALNEVFSI 422


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,717,309
Number of Sequences: 27780
Number of extensions: 224471
Number of successful extensions: 523
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 513
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 523
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 724655464
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)