Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P17_pT_L02
(433 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF531707-1|ABP57431.1| 138|Apis mellifera structural cuticle pr... 33 0.002
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 23 1.9
DQ325067-1|ABD14081.1| 152|Apis mellifera complementary sex det... 22 2.6
DQ325066-1|ABD14080.1| 152|Apis mellifera complementary sex det... 22 2.6
DQ325065-1|ABD14079.1| 152|Apis mellifera complementary sex det... 22 2.6
DQ325064-1|ABD14078.1| 152|Apis mellifera complementary sex det... 22 2.6
DQ325063-1|ABD14077.1| 152|Apis mellifera complementary sex det... 22 2.6
DQ325062-1|ABD14076.1| 152|Apis mellifera complementary sex det... 22 2.6
DQ325061-1|ABD14075.1| 152|Apis mellifera complementary sex det... 22 2.6
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 22 2.6
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 22 2.6
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 22 2.6
AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 22 2.6
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 22 2.6
AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 22 2.6
AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex det... 22 2.6
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 22 2.6
AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 22 3.4
DQ435330-1|ABD92645.1| 132|Apis mellifera OBP13 protein. 21 5.9
>EF531707-1|ABP57431.1| 138|Apis mellifera structural cuticle
protein protein.
Length = 138
Score = 32.7 bits (71), Expect = 0.002
Identities = 12/26 (46%), Positives = 19/26 (73%)
Frame = -2
Query: 180 RGKFSWVGPDGVTYTVTFVADEDGYQ 103
+G S+ PDG ++T+VADE+G+Q
Sbjct: 72 QGSDSYTAPDGQQVSITYVADENGFQ 97
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 22.6 bits (46), Expect = 1.9
Identities = 13/49 (26%), Positives = 23/49 (46%), Gaps = 2/49 (4%)
Frame = -1
Query: 334 RPPGEAQLTSYENVHNGRGNYR--FGYSQSDGTVFEQEGTLKNEGQEEE 194
+PP + Q + + NY + YS+S+G+ L + +EEE
Sbjct: 118 QPPTKHQKLDQKFIFPQENNYNDNYFYSKSNGSNSSNSDVLFKQNKEEE 166
>DQ325067-1|ABD14081.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.2 bits (45), Expect = 2.6
Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 10/48 (20%)
Frame = +1
Query: 241 RSHQI---GYIQICNYPVHYAHF-------RSWLAEPHQVDGKRQLFP 354
R H+I YI+ PV+Y +F R W+ QV G R + P
Sbjct: 77 REHRIIPSHYIEQIPVPVYYGNFPPRPIMVRPWVPMRGQVPGSRHIGP 124
>DQ325066-1|ABD14080.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.2 bits (45), Expect = 2.6
Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 10/48 (20%)
Frame = +1
Query: 241 RSHQI---GYIQICNYPVHYAHF-------RSWLAEPHQVDGKRQLFP 354
R H+I YI+ PV+Y +F R W+ QV G R + P
Sbjct: 77 REHRIIPSHYIEQIPVPVYYGNFPPRPIMVRPWVPMRGQVPGSRHIGP 124
>DQ325065-1|ABD14079.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.2 bits (45), Expect = 2.6
Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 10/48 (20%)
Frame = +1
Query: 241 RSHQI---GYIQICNYPVHYAHF-------RSWLAEPHQVDGKRQLFP 354
R H+I YI+ PV+Y +F R W+ QV G R + P
Sbjct: 77 REHRIIPSHYIEQIPVPVYYGNFPPRPIMVRPWVPMRGQVPGSRHIGP 124
>DQ325064-1|ABD14078.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.2 bits (45), Expect = 2.6
Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 10/48 (20%)
Frame = +1
Query: 241 RSHQI---GYIQICNYPVHYAHF-------RSWLAEPHQVDGKRQLFP 354
R H+I YI+ PV+Y +F R W+ QV G R + P
Sbjct: 77 REHRIIPSHYIEQIPVPVYYGNFPPRPIMVRPWVPMRGQVPGSRHIGP 124
>DQ325063-1|ABD14077.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.2 bits (45), Expect = 2.6
Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 10/48 (20%)
Frame = +1
Query: 241 RSHQI---GYIQICNYPVHYAHF-------RSWLAEPHQVDGKRQLFP 354
R H+I YI+ PV+Y +F R W+ QV G R + P
Sbjct: 77 REHRIIPSHYIEQIPVPVYYGNFPPRPIMVRPWVPMRGQVPGSRHIGP 124
>DQ325062-1|ABD14076.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.2 bits (45), Expect = 2.6
Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 10/48 (20%)
Frame = +1
Query: 241 RSHQI---GYIQICNYPVHYAHF-------RSWLAEPHQVDGKRQLFP 354
R H+I YI+ PV+Y +F R W+ QV G R + P
Sbjct: 77 REHRIIPSHYIEQIPVPVYYGNFPPRPIMVRPWVPMRGQVPGSRHIGP 124
>DQ325061-1|ABD14075.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.2 bits (45), Expect = 2.6
Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 10/48 (20%)
Frame = +1
Query: 241 RSHQI---GYIQICNYPVHYAHF-------RSWLAEPHQVDGKRQLFP 354
R H+I YI+ PV+Y +F R W+ QV G R + P
Sbjct: 77 REHRIIPSHYIEQIPVPVYYGNFPPRPIMVRPWVPMRGQVPGSRHIGP 124
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.2 bits (45), Expect = 2.6
Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 10/48 (20%)
Frame = +1
Query: 241 RSHQI---GYIQICNYPVHYAHF-------RSWLAEPHQVDGKRQLFP 354
R H+I YI+ PV+Y +F R W+ QV G R + P
Sbjct: 326 REHRIIPSHYIEQIPVPVYYGNFPPRPIMVRPWVPMRGQVPGSRHIGP 373
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.2 bits (45), Expect = 2.6
Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 10/48 (20%)
Frame = +1
Query: 241 RSHQI---GYIQICNYPVHYAHF-------RSWLAEPHQVDGKRQLFP 354
R H+I YI+ PV+Y +F R W+ QV G R + P
Sbjct: 326 REHRIIPSHYIEQIPVPVYYGNFPPRPIMVRPWVPMRGQVPGSRHIGP 373
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.2 bits (45), Expect = 2.6
Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 10/48 (20%)
Frame = +1
Query: 241 RSHQI---GYIQICNYPVHYAHF-------RSWLAEPHQVDGKRQLFP 354
R H+I YI+ PV+Y +F R W+ QV G R + P
Sbjct: 326 REHRIIPSHYIEQIPVPVYYGNFPPRPIMVRPWVPMRGQVPGSRHIGP 373
>AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.2 bits (45), Expect = 2.6
Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 10/48 (20%)
Frame = +1
Query: 241 RSHQI---GYIQICNYPVHYAHF-------RSWLAEPHQVDGKRQLFP 354
R H+I YI+ PV+Y +F R W+ QV G R + P
Sbjct: 326 REHRIIPSHYIEQIPVPVYYGNFPPRPIMVRPWVPMRGQVPGSRHIGP 373
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.2 bits (45), Expect = 2.6
Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 10/48 (20%)
Frame = +1
Query: 241 RSHQI---GYIQICNYPVHYAHF-------RSWLAEPHQVDGKRQLFP 354
R H+I YI+ PV+Y +F R W+ QV G R + P
Sbjct: 326 REHRIIPSHYIEQIPVPVYYGNFPPRPIMVRPWVPMRGQVPGSRHIGP 373
>AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.2 bits (45), Expect = 2.6
Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 10/48 (20%)
Frame = +1
Query: 241 RSHQI---GYIQICNYPVHYAHF-------RSWLAEPHQVDGKRQLFP 354
R H+I YI+ PV+Y +F R W+ QV G R + P
Sbjct: 326 REHRIIPSHYIEQIPVPVYYGNFPPRPIMVRPWVPMRGQVPGSRHIGP 373
>AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex
determiner protein.
Length = 385
Score = 22.2 bits (45), Expect = 2.6
Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 10/48 (20%)
Frame = +1
Query: 241 RSHQI---GYIQICNYPVHYAHF-------RSWLAEPHQVDGKRQLFP 354
R H+I YI+ PV+Y +F R W+ QV G R + P
Sbjct: 310 REHRIIPSHYIEQIPVPVYYGNFPPRPIMVRPWVPMRGQVPGSRHIGP 357
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 22.2 bits (45), Expect = 2.6
Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 10/48 (20%)
Frame = +1
Query: 241 RSHQI---GYIQICNYPVHYAHF-------RSWLAEPHQVDGKRQLFP 354
R H+I YI+ PV+Y +F R W+ QV G R + P
Sbjct: 326 REHRIIPSHYIEQIPVPVYYGNFPPRPIMVRPWVPMRGQVPGSRHIGP 373
>AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein.
Length = 400
Score = 21.8 bits (44), Expect = 3.4
Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 10/48 (20%)
Frame = +1
Query: 241 RSHQI---GYIQICNYPVHYAHF-------RSWLAEPHQVDGKRQLFP 354
R H+I YI+ PV+Y +F R W+ QV G R + P
Sbjct: 325 REHRIIPSHYIEQIPAPVYYGNFPPRPIMVRPWVPMRGQVPGSRHIGP 372
>DQ435330-1|ABD92645.1| 132|Apis mellifera OBP13 protein.
Length = 132
Score = 21.0 bits (42), Expect = 5.9
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = -1
Query: 373 LLALCLVGIVAAS 335
+ A CLVGI+A S
Sbjct: 7 IFAFCLVGILAVS 19
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 136,940
Number of Sequences: 438
Number of extensions: 3562
Number of successful extensions: 20
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 11244597
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
- SilkBase 1999-2023 -