Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P17_pT_K22
(665 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC071556-1|AAH71556.1| 1244|Homo sapiens TTBK2 protein protein. 32 1.6
AK131372-1|BAD18523.1| 1167|Homo sapiens protein ( Homo sapiens ... 32 1.6
AF525400-1|AAO14996.1| 1649|Homo sapiens tau-tubulin kinase prot... 32 1.6
AB020654-1|BAA74870.1| 645|Homo sapiens KIAA0847 protein protein. 32 1.6
AY396741-1|AAR91619.1| 2850|Homo sapiens hornerin precursor prot... 31 4.9
AL589986-3|CAH70026.1| 2850|Homo sapiens hornerin protein. 31 4.9
BC057783-1|AAH57783.1| 275|Homo sapiens SFRS2B protein protein. 30 6.5
AF031166-1|AAK54351.1| 272|Homo sapiens SRp46 splicing factor p... 30 6.5
AF031165-1|AAK54350.1| 282|Homo sapiens SRp46 splicing factor p... 30 6.5
AY028376-1|AAK16926.1| 452|Homo sapiens AP-2-like protein protein. 30 8.5
AL031224-3|CAD92558.1| 452|Homo sapiens protein ( Human DNA seq... 30 8.5
>BC071556-1|AAH71556.1| 1244|Homo sapiens TTBK2 protein protein.
Length = 1244
Score = 32.3 bits (70), Expect = 1.6
Identities = 19/57 (33%), Positives = 25/57 (43%)
Frame = -2
Query: 640 STPTKHSHKGSGTSWSSPHSGXKHSYAGHSGSRYSPKDTHGAHSETSYNTIKYSEEL 470
S+P++ SSPH G S HSGS S + H + S N +K S L
Sbjct: 1166 SSPSRAGRPHHDQRSSSPHLGRSKSPPSHSGSSSSRRSCQQEHCKPSKNGLKGSGSL 1222
>AK131372-1|BAD18523.1| 1167|Homo sapiens protein ( Homo sapiens cDNA
FLJ16421 fis, clone BRACE3003920, weakly similar to
Serine/threonine-protein kinase K06H7.1 in chromosome III
(EC 2.7.1.-). ).
Length = 1167
Score = 32.3 bits (70), Expect = 1.6
Identities = 19/57 (33%), Positives = 25/57 (43%)
Frame = -2
Query: 640 STPTKHSHKGSGTSWSSPHSGXKHSYAGHSGSRYSPKDTHGAHSETSYNTIKYSEEL 470
S+P++ SSPH G S HSGS S + H + S N +K S L
Sbjct: 1097 SSPSRAGRPHHDQRSSSPHLGRSKSPPSHSGSSSSRRSCQQEHCKPSKNGLKGSGSL 1153
>AF525400-1|AAO14996.1| 1649|Homo sapiens tau-tubulin kinase protein.
Length = 1649
Score = 32.3 bits (70), Expect = 1.6
Identities = 19/57 (33%), Positives = 25/57 (43%)
Frame = -2
Query: 640 STPTKHSHKGSGTSWSSPHSGXKHSYAGHSGSRYSPKDTHGAHSETSYNTIKYSEEL 470
S+P++ SSPH G S HSGS S + H + S N +K S L
Sbjct: 1571 SSPSRAGRPHHDQRSSSPHLGRSKSPPSHSGSSSSRRSCQQEHCKPSKNGLKGSGSL 1627
>AB020654-1|BAA74870.1| 645|Homo sapiens KIAA0847 protein protein.
Length = 645
Score = 32.3 bits (70), Expect = 1.6
Identities = 19/57 (33%), Positives = 25/57 (43%)
Frame = -2
Query: 640 STPTKHSHKGSGTSWSSPHSGXKHSYAGHSGSRYSPKDTHGAHSETSYNTIKYSEEL 470
S+P++ SSPH G S HSGS S + H + S N +K S L
Sbjct: 567 SSPSRAGRPHHDQRSSSPHLGRSKSPPSHSGSSSSRRSCQQEHCKPSKNGLKGSGSL 623
>AY396741-1|AAR91619.1| 2850|Homo sapiens hornerin precursor protein.
Length = 2850
Score = 30.7 bits (66), Expect = 4.9
Identities = 19/49 (38%), Positives = 25/49 (51%), Gaps = 5/49 (10%)
Frame = -2
Query: 631 TKHSHKGSGTSWSS---PH-SGXKHSYA-GHSGSRYSPKDTHGAHSETS 500
+ +S GSG+ WSS P+ SG HS GH SR +G H +S
Sbjct: 1492 SSYSPYGSGSGWSSSRGPYESGSSHSSGLGHRESRSGQSSGYGQHGSSS 1540
>AL589986-3|CAH70026.1| 2850|Homo sapiens hornerin protein.
Length = 2850
Score = 30.7 bits (66), Expect = 4.9
Identities = 19/49 (38%), Positives = 25/49 (51%), Gaps = 5/49 (10%)
Frame = -2
Query: 631 TKHSHKGSGTSWSS---PH-SGXKHSYA-GHSGSRYSPKDTHGAHSETS 500
+ +S GSG+ WSS P+ SG HS GH SR +G H +S
Sbjct: 1492 SSYSPYGSGSGWSSSRGPYESGSSHSSGLGHRESRSGQSSGYGQHGSSS 1540
>BC057783-1|AAH57783.1| 275|Homo sapiens SFRS2B protein protein.
Length = 275
Score = 30.3 bits (65), Expect = 6.5
Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = -2
Query: 592 SPHSGXKHSYAGHSGSRYSPKDTHGAH-SETSYNTIKYSEELKPRVH 455
SP+S ++S + +S SRY G+H S + Y+ +YS R H
Sbjct: 156 SPYSRSRYSRSPYSRSRYRESRYGGSHYSSSGYSNSRYSRYHSSRSH 202
>AF031166-1|AAK54351.1| 272|Homo sapiens SRp46 splicing factor
protein.
Length = 272
Score = 30.3 bits (65), Expect = 6.5
Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = -2
Query: 592 SPHSGXKHSYAGHSGSRYSPKDTHGAH-SETSYNTIKYSEELKPRVH 455
SP+S ++S + +S SRY G+H S + Y+ +YS R H
Sbjct: 153 SPYSRSRYSRSPYSRSRYRESRYGGSHYSSSGYSNSRYSRYHSSRSH 199
>AF031165-1|AAK54350.1| 282|Homo sapiens SRp46 splicing factor
protein.
Length = 282
Score = 30.3 bits (65), Expect = 6.5
Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = -2
Query: 592 SPHSGXKHSYAGHSGSRYSPKDTHGAH-SETSYNTIKYSEELKPRVH 455
SP+S ++S + +S SRY G+H S + Y+ +YS R H
Sbjct: 163 SPYSRSRYSRSPYSRSRYRESRYGGSHYSSSGYSNSRYSRYHSSRSH 209
>AY028376-1|AAK16926.1| 452|Homo sapiens AP-2-like protein protein.
Length = 452
Score = 29.9 bits (64), Expect = 8.5
Identities = 15/66 (22%), Positives = 34/66 (51%), Gaps = 4/66 (6%)
Frame = -2
Query: 640 STPTKHSHKGSGTSWSSPHSGXKHSYA--GHSGSRYSPKDTHGAHSETSY--NTIKYSEE 473
S+ + ++ +GT ++SP+ H Y H Y + +H A + +Y N++ +S++
Sbjct: 41 SSSSPLTYSTTGTEFASPYFSTNHQYTPLHHQSFHYEFQHSHPAVTPDAYSLNSLHHSQQ 100
Query: 472 LKPRVH 455
++H
Sbjct: 101 YYQQIH 106
>AL031224-3|CAD92558.1| 452|Homo sapiens protein ( Human DNA
sequence from clone RP3-336H9 on chromosome 6p12.1-21.1.
).
Length = 452
Score = 29.9 bits (64), Expect = 8.5
Identities = 15/66 (22%), Positives = 34/66 (51%), Gaps = 4/66 (6%)
Frame = -2
Query: 640 STPTKHSHKGSGTSWSSPHSGXKHSYA--GHSGSRYSPKDTHGAHSETSY--NTIKYSEE 473
S+ + ++ +GT ++SP+ H Y H Y + +H A + +Y N++ +S++
Sbjct: 41 SSSSPLTYSTTGTEFASPYFSTNHQYTPLHHQSFHYEFQHSHPAVTPDAYSLNSLHHSQQ 100
Query: 472 LKPRVH 455
++H
Sbjct: 101 YYQQIH 106
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,586,932
Number of Sequences: 237096
Number of extensions: 1796035
Number of successful extensions: 3652
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 3170
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3644
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7535049140
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -