Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_pT_K20
         (700 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071445-1|AAL49067.1|  419|Drosophila melanogaster RE52884p pro...   140   2e-33
AJ009963-1|CAA08919.1|  380|Drosophila melanogaster farnesyl pyr...   140   2e-33
AF132554-1|AAD27853.1|  419|Drosophila melanogaster GM06581p pro...   140   2e-33
AE013599-1264|AAF58670.1|  419|Drosophila melanogaster CG12389-P...   140   2e-33
AY069353-1|AAL39498.1|  696|Drosophila melanogaster LD05963p pro...    29   8.0  
AE014134-2323|AAF53277.1|  696|Drosophila melanogaster CG6116-PA...    29   8.0  

>AY071445-1|AAL49067.1|  419|Drosophila melanogaster RE52884p
           protein.
          Length = 419

 Score =  140 bits (338), Expect = 2e-33
 Identities = 72/184 (39%), Positives = 102/184 (55%)
 Frame = -3

Query: 611 TSMGQHLDHVTGNRKTDYSSFTLDRXXXXXXXXXXXXXYNLPVSLGLLLAENVDEKIYKS 432
           T+ GQ LD +  NR    S FT++              + LP +L L LA   D + ++ 
Sbjct: 236 TTCGQSLDQLNSNRCV--SEFTMENYKAIVENKTAYYSFYLPFALALHLAGYKDAEAFRQ 293

Query: 431 AQDICLEIGTMFQIQDDFIDCFGDEIKTGKVGTDIQERKCTWLAVQALQRCTEAQRTVFK 252
           ++ I LE+G  FQ+QDDF+DCFG+   TGK+GTDIQ+ KC+WLAV A+QR    Q+ +  
Sbjct: 294 SKTILLEMGNFFQVQDDFLDCFGNPEVTGKIGTDIQDNKCSWLAVVAMQRANVEQKQIMV 353

Query: 251 ACYGSSEPAHVERIKRLYEDLHLPQIYKHQEKAMYDNIIRQIENIPIEAARVXFKKLLEM 72
            CYG  EPA VER+K LY++L LP  Y   E+  Y+ I   I+          F ++L  
Sbjct: 354 DCYGKEEPAKVERVKELYKELGLPSTYAIFEEESYNMIKTHIQQTSRGVPHQTFLQILNK 413

Query: 71  TXKR 60
             +R
Sbjct: 414 IYQR 417


>AJ009963-1|CAA08919.1|  380|Drosophila melanogaster farnesyl
           pyrophosphate synthase protein.
          Length = 380

 Score =  140 bits (338), Expect = 2e-33
 Identities = 72/184 (39%), Positives = 102/184 (55%)
 Frame = -3

Query: 611 TSMGQHLDHVTGNRKTDYSSFTLDRXXXXXXXXXXXXXYNLPVSLGLLLAENVDEKIYKS 432
           T+ GQ LD +  NR    S FT++              + LP +L L LA   D + ++ 
Sbjct: 197 TTCGQSLDQLNSNRCV--SEFTMENYKAIVENKTAYYSFYLPFALALHLAGYKDAEAFRQ 254

Query: 431 AQDICLEIGTMFQIQDDFIDCFGDEIKTGKVGTDIQERKCTWLAVQALQRCTEAQRTVFK 252
           ++ I LE+G  FQ+QDDF+DCFG+   TGK+GTDIQ+ KC+WLAV A+QR    Q+ +  
Sbjct: 255 SKTILLEMGNFFQVQDDFLDCFGNPEVTGKIGTDIQDNKCSWLAVVAMQRANVEQKQIMV 314

Query: 251 ACYGSSEPAHVERIKRLYEDLHLPQIYKHQEKAMYDNIIRQIENIPIEAARVXFKKLLEM 72
            CYG  EPA VER+K LY++L LP  Y   E+  Y+ I   I+          F ++L  
Sbjct: 315 DCYGKEEPAKVERVKELYKELGLPSTYAIFEEESYNMIKTHIQQTSRGVPHQTFLQILNK 374

Query: 71  TXKR 60
             +R
Sbjct: 375 IYQR 378


>AF132554-1|AAD27853.1|  419|Drosophila melanogaster GM06581p
           protein.
          Length = 419

 Score =  140 bits (338), Expect = 2e-33
 Identities = 72/184 (39%), Positives = 102/184 (55%)
 Frame = -3

Query: 611 TSMGQHLDHVTGNRKTDYSSFTLDRXXXXXXXXXXXXXYNLPVSLGLLLAENVDEKIYKS 432
           T+ GQ LD +  NR    S FT++              + LP +L L LA   D + ++ 
Sbjct: 236 TTCGQSLDQLNSNRCV--SEFTMENYKAIVENKTAYYSFYLPFALALHLAGYKDAEAFRQ 293

Query: 431 AQDICLEIGTMFQIQDDFIDCFGDEIKTGKVGTDIQERKCTWLAVQALQRCTEAQRTVFK 252
           ++ I LE+G  FQ+QDDF+DCFG+   TGK+GTDIQ+ KC+WLAV A+QR    Q+ +  
Sbjct: 294 SKTILLEMGNFFQVQDDFLDCFGNPEVTGKIGTDIQDNKCSWLAVVAMQRANVEQKQIMV 353

Query: 251 ACYGSSEPAHVERIKRLYEDLHLPQIYKHQEKAMYDNIIRQIENIPIEAARVXFKKLLEM 72
            CYG  EPA VER+K LY++L LP  Y   E+  Y+ I   I+          F ++L  
Sbjct: 354 DCYGKEEPAKVERVKELYKELGLPSTYAIFEEESYNMIKTHIQQTSRGVPHQTFLQILNK 413

Query: 71  TXKR 60
             +R
Sbjct: 414 IYQR 417


>AE013599-1264|AAF58670.1|  419|Drosophila melanogaster CG12389-PA
           protein.
          Length = 419

 Score =  140 bits (338), Expect = 2e-33
 Identities = 72/184 (39%), Positives = 102/184 (55%)
 Frame = -3

Query: 611 TSMGQHLDHVTGNRKTDYSSFTLDRXXXXXXXXXXXXXYNLPVSLGLLLAENVDEKIYKS 432
           T+ GQ LD +  NR    S FT++              + LP +L L LA   D + ++ 
Sbjct: 236 TTCGQSLDQLNSNRCV--SEFTMENYKAIVENKTAYYSFYLPFALALHLAGYKDAEAFRQ 293

Query: 431 AQDICLEIGTMFQIQDDFIDCFGDEIKTGKVGTDIQERKCTWLAVQALQRCTEAQRTVFK 252
           ++ I LE+G  FQ+QDDF+DCFG+   TGK+GTDIQ+ KC+WLAV A+QR    Q+ +  
Sbjct: 294 SKTILLEMGNFFQVQDDFLDCFGNPEVTGKIGTDIQDNKCSWLAVVAMQRANVEQKQIMV 353

Query: 251 ACYGSSEPAHVERIKRLYEDLHLPQIYKHQEKAMYDNIIRQIENIPIEAARVXFKKLLEM 72
            CYG  EPA VER+K LY++L LP  Y   E+  Y+ I   I+          F ++L  
Sbjct: 354 DCYGKEEPAKVERVKELYKELGLPSTYAIFEEESYNMIKTHIQQTSRGVPHQTFLQILNK 413

Query: 71  TXKR 60
             +R
Sbjct: 414 IYQR 417


>AY069353-1|AAL39498.1|  696|Drosophila melanogaster LD05963p
           protein.
          Length = 696

 Score = 28.7 bits (61), Expect = 8.0
 Identities = 14/43 (32%), Positives = 20/43 (46%)
 Frame = -1

Query: 349 LVKLVQIYKSANVLGWQFKRCSAVLKHNVQYSKPVMVAVNQHM 221
           +++L +IY   NV G QF  C     H  QY+     A N  +
Sbjct: 423 VLELQEIYNIQNVGGRQFSICGIAFPHMEQYTSESRQAANAQL 465


>AE014134-2323|AAF53277.1|  696|Drosophila melanogaster CG6116-PA
           protein.
          Length = 696

 Score = 28.7 bits (61), Expect = 8.0
 Identities = 14/43 (32%), Positives = 20/43 (46%)
 Frame = -1

Query: 349 LVKLVQIYKSANVLGWQFKRCSAVLKHNVQYSKPVMVAVNQHM 221
           +++L +IY   NV G QF  C     H  QY+     A N  +
Sbjct: 423 VLELQEIYNIQNVGGRQFSICGIAFPHMEQYTSESRQAANAQL 465


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,065,646
Number of Sequences: 53049
Number of extensions: 596513
Number of successful extensions: 1762
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1721
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1761
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3067209849
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)