Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P17_pT_K08
(806 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_0411 + 29151647-29151790,29152974-29153039,29153398-291535... 161 8e-40
05_06_0265 - 26759960-26760088,26760315-26760386,26760457-267605... 142 3e-34
04_04_1432 - 33558895-33559023,33559215-33559286,33559405-335594... 140 9e-34
04_04_1431 - 33551127-33551300,33551362-33551433,33551508-335515... 110 1e-24
01_06_0363 - 28745581-28745709,28746043-28746114,28746373-287464... 82 6e-16
07_03_1039 - 23454130-23454552,23454859-23455536 35 0.066
08_02_0370 - 16333471-16333526,16333821-16333912,16334553-163346... 29 5.8
01_02_0098 - 11087875-11089110,11091744-11092022 28 7.6
>01_06_0411 +
29151647-29151790,29152974-29153039,29153398-29153538,
29153638-29153724,29153968-29154084,29154177-29154265,
29154510-29154561,29154667-29154762,29154835-29154879,
29155002-29155091,29155164-29155235,29155490-29155618
Length = 375
Score = 161 bits (390), Expect = 8e-40
Identities = 82/239 (34%), Positives = 137/239 (57%), Gaps = 2/239 (0%)
Frame = -2
Query: 769 PCWYRRPEVGITCAFXDSLLIHSSLFEFXXTNFRTNPNYIKMFELFNETLWRTSMGQHLD 590
PCW+R P+VG+ A D +++ + + +F+ Y+ + +LFNE ++T+ GQ LD
Sbjct: 139 PCWFRVPQVGLI-AVNDGIILRNHISRILQRHFKGKLYYVDLIDLFNEVEFKTASGQLLD 197
Query: 589 HVTGNR-KTDYSSFTLDRXXXXXXXXXXXXXYNLPVSLGLLLA-ENVDEKIYKSAQDICL 416
+T + + D + + L + LPV+ LLL+ EN+D + ++I +
Sbjct: 198 LITTHEGEKDLTKYNLTVHRRIVQYKTAYYSFYLPVACALLLSGENLDN--FGDVKNILV 255
Query: 415 EIGTMFQIQDDFIDCFGDEIKTGKVGTDIQERKCTWLAVQALQRCTEAQRTVFKACYGSS 236
E+GT FQ+QDD++DC+GD GK+GTDI++ KC+WL VQAL+R E Q+ + YG
Sbjct: 256 EMGTYFQVQDDYLDCYGDPEFIGKIGTDIEDYKCSWLVVQALERADENQKHILFENYGKP 315
Query: 235 EPAHVERIKRLYEDLHLPQIYKHQEKAMYDNIIRQIENITIEAARVLFKKLLDITYNRQ 59
+P V ++K LY++L+L ++ E+ Y+ +I IE +A + + K L Y RQ
Sbjct: 316 DPECVAKVKDLYKELNLEAVFHEYERESYNKLIADIEAHPNKAVQNVLKSFLHKIYKRQ 374
>05_06_0265 -
26759960-26760088,26760315-26760386,26760457-26760546,
26760649-26760693,26760785-26760880,26760980-26761031,
26761209-26761297,26761388-26761504,26761680-26761737,
26761834-26761936,26762027-26762051,26762677-26762826
Length = 341
Score = 142 bits (344), Expect = 3e-34
Identities = 75/225 (33%), Positives = 122/225 (54%), Gaps = 1/225 (0%)
Frame = -2
Query: 730 AFXDSLLIHSSLFEFXXTNFRTNPNYIKMFELFNETLWRTSMGQHLDHVTGNR-KTDYSS 554
A D +++ + + +FR Y + +LFNE ++T+ GQ LD +T + + D +
Sbjct: 117 AINDGIILRNHITRMLRLHFRGKLYYADLLDLFNEVEFKTASGQLLDLITTHEGEKDLNK 176
Query: 553 FTLDRXXXXXXXXXXXXXYNLPVSLGLLLAENVDEKIYKSAQDICLEIGTMFQIQDDFID 374
+ + + LPV+ LLL+ D Y + +DI +++G FQ+QDD++D
Sbjct: 177 YNIGVHRRIVQYKTSYYSFYLPVACALLLSGE-DLTKYGAVEDILVKMGIYFQVQDDYLD 235
Query: 373 CFGDEIKTGKVGTDIQERKCTWLAVQALQRCTEAQRTVFKACYGSSEPAHVERIKRLYED 194
C+GD GK+GTDI++ KC+WL VQAL+R E+Q++V YG +PA V ++K LY +
Sbjct: 236 CYGDPKFIGKIGTDIEDYKCSWLVVQALERADESQKSVLFENYGKKDPACVAKVKSLYRE 295
Query: 193 LHLPQIYKHQEKAMYDNIIRQIENITIEAARVLFKKLLDITYNRQ 59
L+L ++ E Y +I IE A + + K L Y RQ
Sbjct: 296 LNLEAVFLDYENESYKKLIADIEAQPSIAVQNVLKSFLHKIYKRQ 340
>04_04_1432 -
33558895-33559023,33559215-33559286,33559405-33559494,
33559574-33559618,33559693-33559788,33559905-33559956,
33560044-33560132,33560226-33560342,33560448-33560534,
33560646-33560761,33560854-33560878,33561816-33562121
Length = 407
Score = 140 bits (340), Expect = 9e-34
Identities = 77/237 (32%), Positives = 123/237 (51%), Gaps = 1/237 (0%)
Frame = -2
Query: 766 CWYRRPEVGITCAFXDSLLIHSSLFEFXXTNFRTNPNYIKMFELFNETLWRTSMGQHLDH 587
CWY+ P VG++ A D +L+ + F+ ++ + EL+NE +T+MGQ LD
Sbjct: 172 CWYKLPTVGMS-AINDGVLLKCHVQAIIKRYFKEKFYFLDLMELWNEIGLQTAMGQMLDL 230
Query: 586 VTGNRKT-DYSSFTLDRXXXXXXXXXXXXXYNLPVSLGLLLAENVDEKIYKSAQDICLEI 410
+T + D + + + + LPV+ LLL Y +++ +E+
Sbjct: 231 ITTHTGAKDLARYRIQGYRRIVKYKTSYYSFYLPVACALLL-NGARLSDYVELKNVLIEM 289
Query: 409 GTMFQIQDDFIDCFGDEIKTGKVGTDIQERKCTWLAVQALQRCTEAQRTVFKACYGSSEP 230
G FQIQDD++DCFGD GKVGTDI++ KC+WL VQA++ E + + YG S+P
Sbjct: 290 GVYFQIQDDYLDCFGDPEVIGKVGTDIEDYKCSWLIVQAMELANENEMKILYENYGKSDP 349
Query: 229 AHVERIKRLYEDLHLPQIYKHQEKAMYDNIIRQIENITIEAARVLFKKLLDITYNRQ 59
V +K +Y +L L I+ E +Y +++ I+ T A R + K L Y R+
Sbjct: 350 KCVAEVKSVYRELDLQDIFLEYESRVYKHLVSTIDAETDRAIRDILKSFLKKIYRRK 406
>04_04_1431 -
33551127-33551300,33551362-33551433,33551508-33551597,
33551671-33551715,33551785-33551880,33552245-33552296,
33552412-33552500,33552590-33552887,33553007-33553109,
33553328-33553352,33553503-33553763
Length = 434
Score = 110 bits (264), Expect = 1e-24
Identities = 73/246 (29%), Positives = 118/246 (47%), Gaps = 16/246 (6%)
Frame = -2
Query: 748 EVGITCAFXDSLLIHSSLFEFXXTNFRTNPNYIKMFELFNETLWRTSMGQHLDHV-TGNR 572
+VG+ D +++ + FR P ++ + E+++E +TS+GQ LD + T
Sbjct: 190 QVGLR-GINDGIILKCHILIMIKKYFREKPYFLDILEIWSEIALQTSLGQMLDLISTHTG 248
Query: 571 KTDYSSFTLDRXXXXXXXXXXXXXYNLPVSLGLLLAENVDEKIYKSAQDICLEIGTMFQI 392
D + ++++ + LPV+ LLL+ E + +DI +E+G FQI
Sbjct: 249 ADDLAKYSIEGYRRIVKYKTAYYSFYLPVANALLLSGAKLED-FSGLKDILIEMGIYFQI 307
Query: 391 QDDFIDCFGDEIKTGKVGTDIQERKCTWLAVQALQRCTEAQRTVFKACYGSSEPAHVERI 212
QDD++DCF D GK+GTDI++ KC+WL VQAL Q V YG + + V +
Sbjct: 308 QDDYLDCFADPNTIGKIGTDIEDHKCSWLIVQALGHADNNQIEVLHRNYGKKDSSSVSEV 367
Query: 211 KRLYEDLHL--------------PQ-IYKHQEKAMYDNIIRQIENITIEAARVLFKKLLD 77
KR Y L L PQ I+ E+ Y++++ IE AAR + L
Sbjct: 368 KRTYAALDLKIWAIDLADCEFCPPQDIFSEFERRCYNHLVTSIEAQKDHAAREILISFLK 427
Query: 76 ITYNRQ 59
+ R+
Sbjct: 428 KIHQRK 433
>01_06_0363 -
28745581-28745709,28746043-28746114,28746373-28746417,
28746523-28746618,28747029-28747080,28747232-28747305,
28747386-28747502,28747844-28747930,28748186-28748281,
28748508-28748654
Length = 304
Score = 81.8 bits (193), Expect = 6e-16
Identities = 49/143 (34%), Positives = 73/143 (51%), Gaps = 1/143 (0%)
Frame = -2
Query: 769 PCWYRRPEVGITCAFXDSLLIHSSLFEFXXTNFRTNPNYIKMFELFNETLWRTSMGQHLD 590
PCW+R P+VG+ A D L++ S + FR Y+ + +LFNE +T+ GQ LD
Sbjct: 103 PCWFRLPKVGLI-AINDGLVLRSQISRIFRRYFRGKSYYVDLLDLFNEVEIQTTSGQLLD 161
Query: 589 HVTGNRKTDYSSFTLDRXXXXXXXXXXXXXYNLPVSLGLLLA-ENVDEKIYKSAQDICLE 413
+T N L++ + LPV+ LLL E++D Y + I +E
Sbjct: 162 QITTNEGRK----DLNKYRRIVEYKTAYYSFYLPVACALLLFDESLDN--YAQVKHILVE 215
Query: 412 IGTMFQIQDDFIDCFGDEIKTGK 344
+G FQ QDD++DCFG+ GK
Sbjct: 216 MGVYFQSQDDYLDCFGEPEIIGK 238
Score = 54.0 bits (124), Expect = 1e-07
Identities = 26/74 (35%), Positives = 38/74 (51%)
Frame = -2
Query: 283 CTEAQRTVFKACYGSSEPAHVERIKRLYEDLHLPQIYKHQEKAMYDNIIRQIENITIEAA 104
C + K YG S+PA V ++K LY +LHL +++ E+ Y+ +I IE EA
Sbjct: 229 CFGEPEIIGKENYGKSDPACVAKVKDLYNELHLQRVFSEYERESYEKLISAIEAQPNEAV 288
Query: 103 RVLFKKLLDITYNR 62
R + K L Y R
Sbjct: 289 RAVLKSFLHKIYKR 302
>07_03_1039 - 23454130-23454552,23454859-23455536
Length = 366
Score = 35.1 bits (77), Expect = 0.066
Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Frame = -2
Query: 487 VSLGLLLAENVDEKIYKSAQDICLEIGTMFQIQDDFIDCFGDEIKTGK-VGTDIQERKCT 311
V +G +L DE+I +S + IG +FQ+ DD +D + GK G D+ K T
Sbjct: 260 VVIGAILGGGSDEQI-ESLRMYARSIGLLFQVVDDILDVTKSSEELGKTAGKDLASDKTT 318
Query: 310 WLAVQALQRCTE 275
+ + L++ E
Sbjct: 319 YPKLLGLEKSRE 330
>08_02_0370 -
16333471-16333526,16333821-16333912,16334553-16334671,
16335152-16335226,16335328-16335393,16335507-16335563,
16335640-16335689,16335774-16335944,16337057-16337183,
16337658-16338017
Length = 390
Score = 28.7 bits (61), Expect = 5.8
Identities = 16/70 (22%), Positives = 35/70 (50%)
Frame = -2
Query: 481 LGLLLAENVDEKIYKSAQDICLEIGTMFQIQDDFIDCFGDEIKTGKVGTDIQERKCTWLA 302
L +++ E + + +++ + T++Q+ + ID G E+K ++ IQE C L
Sbjct: 215 LPIIVLEMPSVLLMAAIRNVHIARPTIYQVVKEMIDKMGYEVKLVRINKRIQEAYCAELF 274
Query: 301 VQALQRCTEA 272
+ + TE+
Sbjct: 275 LTKVGDHTES 284
>01_02_0098 - 11087875-11089110,11091744-11092022
Length = 504
Score = 28.3 bits (60), Expect = 7.6
Identities = 17/62 (27%), Positives = 35/62 (56%)
Frame = -2
Query: 292 LQRCTEAQRTVFKACYGSSEPAHVERIKRLYEDLHLPQIYKHQEKAMYDNIIRQIENITI 113
++R E+ ++ FK C S ++ +K+L + L QI++ E + +++ +I NI I
Sbjct: 298 VKRIWESLKSAFKKCTNRSYLVMLKALKKLDDFDTLQQIFQEWESS-HEHYDMKIPNIII 356
Query: 112 EA 107
+A
Sbjct: 357 QA 358
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,012,473
Number of Sequences: 37544
Number of extensions: 409413
Number of successful extensions: 844
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 816
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 839
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2197677108
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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