Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P17_pT_K08
(806 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M29863-1|AAA35820.1| 346|Homo sapiens protein ( Human farnesyl ... 164 3e-40
J05262-1|AAA52423.1| 353|Homo sapiens FDPS protein. 164 3e-40
D14697-1|BAA03523.2| 420|Homo sapiens KIAA1293 protein. 164 3e-40
BC010004-1|AAH10004.1| 419|Homo sapiens farnesyl diphosphate sy... 164 3e-40
AL139410-1|CAI12715.1| 419|Homo sapiens farnesyl diphosphate sy... 164 3e-40
Z47055-1|CAA87327.1| 348|Homo sapiens farnesyl pyrophosphate sy... 149 2e-35
BC050292-1|AAH50292.1| 298|Homo sapiens LOC619190 protein protein. 137 4e-32
M87434-1|AAA60607.1| 727|Homo sapiens 71 kDa 2'5' oligoadenylat... 30 8.6
M87284-1|AAA60606.1| 687|Homo sapiens 2'5' oligoadenylate synth... 30 8.6
BC049215-1|AAH49215.1| 687|Homo sapiens 2'-5'-oligoadenylate sy... 30 8.6
>M29863-1|AAA35820.1| 346|Homo sapiens protein ( Human farnesyl
pyrophosphate synthetase mRNA (hpt807), 3' end. ).
Length = 346
Score = 164 bits (399), Expect = 3e-40
Identities = 86/237 (36%), Positives = 127/237 (53%), Gaps = 1/237 (0%)
Frame = -2
Query: 766 CWYRRPEVGITCAFXDSLLIHSSLFEFXXTNFRTNPNYIKMFELFNETLWRTSMGQHLDH 587
CWY++P VG+ A D+ L+ + ++ R P Y+ + ELF ++ ++T +GQ LD
Sbjct: 110 CWYQKPGVGLD-AINDANLLEACIYRLLKLYCREQPYYLNLIELFLQSSYQTEIGQTLDL 168
Query: 586 VTGNR-KTDYSSFTLDRXXXXXXXXXXXXXYNLPVSLGLLLAENVDEKIYKSAQDICLEI 410
+T + D FT R + LP++ + +A EK + +A+ I LE+
Sbjct: 169 LTAPQGNVDLVRFTEKRYKSIVKYKTAFYSFYLPIAAAMYMAGIDGEKEHANAKKILLEM 228
Query: 409 GTMFQIQDDFIDCFGDEIKTGKVGTDIQERKCTWLAVQALQRCTEAQRTVFKACYGSSEP 230
G FQIQDD++D FGD TGK+GTDIQ+ KC+WL VQ LQR T Q + K YG E
Sbjct: 229 GEFFQIQDDYLDLFGDPSVTGKIGTDIQDNKCSWLVVQCLQRATPEQYQILKENYGQKEA 288
Query: 229 AHVERIKRLYEDLHLPQIYKHQEKAMYDNIIRQIENITIEAARVLFKKLLDITYNRQ 59
V R+K LYE+L LP ++ E+ Y +I+ IE +F L Y R+
Sbjct: 289 EKVARVKALYEELDLPAVFLQYEEDSYSHIMALIEQYAAPLPPAVFLGLARKIYKRR 345
>J05262-1|AAA52423.1| 353|Homo sapiens FDPS protein.
Length = 353
Score = 164 bits (399), Expect = 3e-40
Identities = 86/237 (36%), Positives = 127/237 (53%), Gaps = 1/237 (0%)
Frame = -2
Query: 766 CWYRRPEVGITCAFXDSLLIHSSLFEFXXTNFRTNPNYIKMFELFNETLWRTSMGQHLDH 587
CWY++P VG+ A D+ L+ + ++ R P Y+ + ELF ++ ++T +GQ LD
Sbjct: 117 CWYQKPGVGLD-AINDANLLEACIYRLLKLYCREQPYYLNLIELFLQSSYQTEIGQTLDL 175
Query: 586 VTGNR-KTDYSSFTLDRXXXXXXXXXXXXXYNLPVSLGLLLAENVDEKIYKSAQDICLEI 410
+T + D FT R + LP++ + +A EK + +A+ I LE+
Sbjct: 176 LTAPQGNVDLVRFTEKRYKSIVKYKTAFYSFYLPIAAAMYMAGIDGEKEHANAKKILLEM 235
Query: 409 GTMFQIQDDFIDCFGDEIKTGKVGTDIQERKCTWLAVQALQRCTEAQRTVFKACYGSSEP 230
G FQIQDD++D FGD TGK+GTDIQ+ KC+WL VQ LQR T Q + K YG E
Sbjct: 236 GEFFQIQDDYLDLFGDPSVTGKIGTDIQDNKCSWLVVQCLQRATPEQYQILKENYGQKEA 295
Query: 229 AHVERIKRLYEDLHLPQIYKHQEKAMYDNIIRQIENITIEAARVLFKKLLDITYNRQ 59
V R+K LYE+L LP ++ E+ Y +I+ IE +F L Y R+
Sbjct: 296 EKVARVKALYEELDLPAVFLQYEEDSYSHIMALIEQYAAPLPPAVFLGLARKIYKRR 352
>D14697-1|BAA03523.2| 420|Homo sapiens KIAA1293 protein.
Length = 420
Score = 164 bits (399), Expect = 3e-40
Identities = 86/237 (36%), Positives = 127/237 (53%), Gaps = 1/237 (0%)
Frame = -2
Query: 766 CWYRRPEVGITCAFXDSLLIHSSLFEFXXTNFRTNPNYIKMFELFNETLWRTSMGQHLDH 587
CWY++P VG+ A D+ L+ + ++ R P Y+ + ELF ++ ++T +GQ LD
Sbjct: 184 CWYQKPGVGLD-AINDANLLEACIYRLLKLYCREQPYYLNLIELFLQSSYQTEIGQTLDL 242
Query: 586 VTGNR-KTDYSSFTLDRXXXXXXXXXXXXXYNLPVSLGLLLAENVDEKIYKSAQDICLEI 410
+T + D FT R + LP++ + +A EK + +A+ I LE+
Sbjct: 243 LTAPQGNVDLVRFTEKRYKSIVKYKTAFYSFYLPIAAAMYMAGIDGEKEHANAKKILLEM 302
Query: 409 GTMFQIQDDFIDCFGDEIKTGKVGTDIQERKCTWLAVQALQRCTEAQRTVFKACYGSSEP 230
G FQIQDD++D FGD TGK+GTDIQ+ KC+WL VQ LQR T Q + K YG E
Sbjct: 303 GEFFQIQDDYLDLFGDPSVTGKIGTDIQDNKCSWLVVQCLQRATPEQYQILKENYGQKEA 362
Query: 229 AHVERIKRLYEDLHLPQIYKHQEKAMYDNIIRQIENITIEAARVLFKKLLDITYNRQ 59
V R+K LYE+L LP ++ E+ Y +I+ IE +F L Y R+
Sbjct: 363 EKVARVKALYEELDLPAVFLQYEEDSYSHIMALIEQYAAPLPPAVFLGLARKIYKRR 419
>BC010004-1|AAH10004.1| 419|Homo sapiens farnesyl diphosphate
synthase (farnesyl pyrophosphate synthetase,
dimethylallyl protein.
Length = 419
Score = 164 bits (399), Expect = 3e-40
Identities = 86/237 (36%), Positives = 127/237 (53%), Gaps = 1/237 (0%)
Frame = -2
Query: 766 CWYRRPEVGITCAFXDSLLIHSSLFEFXXTNFRTNPNYIKMFELFNETLWRTSMGQHLDH 587
CWY++P VG+ A D+ L+ + ++ R P Y+ + ELF ++ ++T +GQ LD
Sbjct: 183 CWYQKPGVGLD-AINDANLLEACIYRLLKLYCREQPYYLNLIELFLQSSYQTEIGQTLDL 241
Query: 586 VTGNR-KTDYSSFTLDRXXXXXXXXXXXXXYNLPVSLGLLLAENVDEKIYKSAQDICLEI 410
+T + D FT R + LP++ + +A EK + +A+ I LE+
Sbjct: 242 LTAPQGNVDLVRFTEKRYKSIVKYKTAFYSFYLPIAAAMYMAGIDGEKEHANAKKILLEM 301
Query: 409 GTMFQIQDDFIDCFGDEIKTGKVGTDIQERKCTWLAVQALQRCTEAQRTVFKACYGSSEP 230
G FQIQDD++D FGD TGK+GTDIQ+ KC+WL VQ LQR T Q + K YG E
Sbjct: 302 GEFFQIQDDYLDLFGDPSVTGKIGTDIQDNKCSWLVVQCLQRATPEQYQILKENYGQKEA 361
Query: 229 AHVERIKRLYEDLHLPQIYKHQEKAMYDNIIRQIENITIEAARVLFKKLLDITYNRQ 59
V R+K LYE+L LP ++ E+ Y +I+ IE +F L Y R+
Sbjct: 362 EKVARVKALYEELDLPAVFLQYEEDSYSHIMALIEQYAAPLPPAVFLGLARKIYKRR 418
>AL139410-1|CAI12715.1| 419|Homo sapiens farnesyl diphosphate
synthase (farnesyl pyrophosphate synthetase,
dimethylallyl protein.
Length = 419
Score = 164 bits (399), Expect = 3e-40
Identities = 86/237 (36%), Positives = 127/237 (53%), Gaps = 1/237 (0%)
Frame = -2
Query: 766 CWYRRPEVGITCAFXDSLLIHSSLFEFXXTNFRTNPNYIKMFELFNETLWRTSMGQHLDH 587
CWY++P VG+ A D+ L+ + ++ R P Y+ + ELF ++ ++T +GQ LD
Sbjct: 183 CWYQKPGVGLD-AINDANLLEACIYRLLKLYCREQPYYLNLIELFLQSSYQTEIGQTLDL 241
Query: 586 VTGNR-KTDYSSFTLDRXXXXXXXXXXXXXYNLPVSLGLLLAENVDEKIYKSAQDICLEI 410
+T + D FT R + LP++ + +A EK + +A+ I LE+
Sbjct: 242 LTAPQGNVDLVRFTEKRYKSIVKYKTAFYSFYLPIAAAMYMAGIDGEKEHANAKKILLEM 301
Query: 409 GTMFQIQDDFIDCFGDEIKTGKVGTDIQERKCTWLAVQALQRCTEAQRTVFKACYGSSEP 230
G FQIQDD++D FGD TGK+GTDIQ+ KC+WL VQ LQR T Q + K YG E
Sbjct: 302 GEFFQIQDDYLDLFGDPSVTGKIGTDIQDNKCSWLVVQCLQRATPEQYQILKENYGQKEA 361
Query: 229 AHVERIKRLYEDLHLPQIYKHQEKAMYDNIIRQIENITIEAARVLFKKLLDITYNRQ 59
V R+K LYE+L LP ++ E+ Y +I+ IE +F L Y R+
Sbjct: 362 EKVARVKALYEELDLPAVFLQYEEDSYSHIMALIEQYAAPLPPAVFLGLARKIYKRR 418
>Z47055-1|CAA87327.1| 348|Homo sapiens farnesyl pyrophosphate
synthetase like-4 protein.
Length = 348
Score = 149 bits (360), Expect = 2e-35
Identities = 82/236 (34%), Positives = 118/236 (50%), Gaps = 1/236 (0%)
Frame = -2
Query: 766 CWYRRPEVGITCAFXDSLLIHSSLFEFXXTNFRTNPNYIKMFELFNETLWRTSMGQHLDH 587
CWY++P VG+ A D+ L+ + ++ R P Y+ + ELF ++ ++T +GQ LD
Sbjct: 112 CWYQKPGVGLD-AIDDANLLEACIYPLLKLYCREQPYYLNLIELFLQSSYQTEIGQTLDL 170
Query: 586 VTGNR-KTDYSSFTLDRXXXXXXXXXXXXXYNLPVSLGLLLAENVDEKIYKSAQDICLEI 410
+T + D FT R LP++ V EK + +A I LE+
Sbjct: 171 LTXPQGNVDLVRFTEKRYISIVKYKTALSSSYLPIAAAXXXXGIVXEKEHANAXKILLEM 230
Query: 409 GTMFQIQDDFIDCFGDEIKTGKVGTDIQERKCTWLAVQALQRCTEAQRTVFKACYGSSEP 230
G QIQDD+++ FGD TGK+GTDIQ+ KC L VQ L R T Q + K YG E
Sbjct: 231 GEFSQIQDDYLELFGDPSVTGKIGTDIQDXKCNCLXVQCLXRATPEQYQILKENYGQKEA 290
Query: 229 AHVERIKRLYEDLHLPQIYKHQEKAMYDNIIRQIENITIEAARVLFKKLLDITYNR 62
V R+K LYE+L LP ++ E+ Y +I+ IE +F L Y R
Sbjct: 291 EKVPRVKALYEELDLPAVFLQYEEDSYSHIMALIEQYAAPLPPAVFLGLARQIYKR 346
>BC050292-1|AAH50292.1| 298|Homo sapiens LOC619190 protein protein.
Length = 298
Score = 137 bits (332), Expect = 4e-32
Identities = 73/214 (34%), Positives = 113/214 (52%), Gaps = 1/214 (0%)
Frame = -2
Query: 763 WYRRPEVGITCAFXDSLLIHSSLFEFXXTNFRTNPNYIKMFELFNETLWRTSMGQHLDHV 584
WY++ +G+ A D++L+ + ++ R P Y+ + ELF + ++T +GQ LD +
Sbjct: 86 WYQKLGMGLD-AINDAILLEACIYCLLKLYCREQPYYLNLMELFQQNSYQTEIGQTLDLI 144
Query: 583 TGNR-KTDYSSFTLDRXXXXXXXXXXXXXYNLPVSLGLLLAENVDEKIYKSAQDICLEIG 407
T + D T R + LPV+ + ++ D+K + SA+ I LEI
Sbjct: 145 TTPQGNVDLRRCTEKRHKSVVKYKTAFYSFYLPVAAAMYMSRMDDKKEHTSAKKILLEIQ 204
Query: 406 TMFQIQDDFIDCFGDEIKTGKVGTDIQERKCTWLAVQALQRCTEAQRTVFKACYGSSEPA 227
FQIQDD++D GD TG+VG D Q+ KC+WL VQ L + T Q + K Y E
Sbjct: 205 EFFQIQDDYLDFSGDPSVTGRVGNDFQDNKCSWLVVQCLLQATPEQYQILKENYRQKEAE 264
Query: 226 HVERIKRLYEDLHLPQIYKHQEKAMYDNIIRQIE 125
V R+K LYE+L LP ++ EK Y +++ IE
Sbjct: 265 KVARVKALYEELDLPAVFLQYEKDSYSHVMGLIE 298
>M87434-1|AAA60607.1| 727|Homo sapiens 71 kDa 2'5' oligoadenylate
synthetase protein.
Length = 727
Score = 30.3 bits (65), Expect = 8.6
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = -3
Query: 342 LVQIYKSANVLGWQFKRCSAVLKHNVQYSKP 250
L+ +YKS+++ G +F C VL+ N S+P
Sbjct: 506 LIDLYKSSDLPGGEFSTCFTVLQRNFIRSRP 536
>M87284-1|AAA60606.1| 687|Homo sapiens 2'5' oligoadenylate
synthetase protein.
Length = 687
Score = 30.3 bits (65), Expect = 8.6
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = -3
Query: 342 LVQIYKSANVLGWQFKRCSAVLKHNVQYSKP 250
L+ +YKS+++ G +F C VL+ N S+P
Sbjct: 506 LIDLYKSSDLPGGEFSTCFTVLQRNFIRSRP 536
>BC049215-1|AAH49215.1| 687|Homo sapiens 2'-5'-oligoadenylate
synthetase 2, 69/71kDa protein.
Length = 687
Score = 30.3 bits (65), Expect = 8.6
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = -3
Query: 342 LVQIYKSANVLGWQFKRCSAVLKHNVQYSKP 250
L+ +YKS+++ G +F C VL+ N S+P
Sbjct: 506 LIDLYKSSDLPGGEFSTCFTVLQRNFIRSRP 536
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 117,150,384
Number of Sequences: 237096
Number of extensions: 2390460
Number of successful extensions: 6999
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 6831
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6985
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9980595722
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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