Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_pT_K07
         (666 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q6KHU2 Cluster: Unspecified toxin/drug ABC transporter ...    34   3.5  
UniRef50_A6DCQ4 Cluster: Zinc ABC transporter, permease protein;...    33   4.7  
UniRef50_Q23C14 Cluster: Putative uncharacterized protein; n=2; ...    33   4.7  
UniRef50_Q8A827 Cluster: Putative uncharacterized protein; n=1; ...    33   8.2  

>UniRef50_Q6KHU2 Cluster: Unspecified toxin/drug ABC transporter
           ATP-binding and permease protein; n=1; Mycoplasma
           mobile|Rep: Unspecified toxin/drug ABC transporter
           ATP-binding and permease protein - Mycoplasma mobile
          Length = 677

 Score = 33.9 bits (74), Expect = 3.5
 Identities = 20/46 (43%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
 Frame = +2

Query: 275 TINMLADL-CDKTFKIPNSFSLNYSKQIINIDYVKNNNNID*YIFF 409
           TIN L+ L     F+  N+ +LNYS +I NID++K    +D YI F
Sbjct: 226 TINKLSKLNLGIYFQKYNTLNLNYSNKITNIDHLKRIEILDSYINF 271


>UniRef50_A6DCQ4 Cluster: Zinc ABC transporter, permease protein;
           n=1; Caminibacter mediatlanticus TB-2|Rep: Zinc ABC
           transporter, permease protein - Caminibacter
           mediatlanticus TB-2
          Length = 256

 Score = 33.5 bits (73), Expect = 4.7
 Identities = 17/42 (40%), Positives = 24/42 (57%)
 Frame = -2

Query: 497 LVKMIVYNSILIEFNEMLIKNQTKAFSHLRKIYINRYYYYFL 372
           +V +I+  SI++ +N  L  +  K F  LRKI  N  Y YFL
Sbjct: 132 IVDLILLISIILLYNRFLALSYDKEFLSLRKINTNLLYTYFL 173


>UniRef50_Q23C14 Cluster: Putative uncharacterized protein; n=2;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 927

 Score = 33.5 bits (73), Expect = 4.7
 Identities = 16/47 (34%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
 Frame = -2

Query: 500 CLVKMIVYNSILIEFNEMLIKNQTKAFSHLRKIYINRYY-YYFLRNR 363
           C V +   N + + +NE+L +N+++ F  LRK Y  ++Y  + LRN+
Sbjct: 735 CSVLIDDQNIVKLNYNEVLDQNESQQFIFLRKQYTQKFYSRHLLRNQ 781


>UniRef50_Q8A827 Cluster: Putative uncharacterized protein; n=1;
           Bacteroides thetaiotaomicron|Rep: Putative
           uncharacterized protein - Bacteroides thetaiotaomicron
          Length = 285

 Score = 32.7 bits (71), Expect = 8.2
 Identities = 12/33 (36%), Positives = 21/33 (63%)
 Frame = -3

Query: 628 LFFFSIRCYLKFSFLNFKSARFYIHCYNLYEIF 530
           LF+   + Y+ +++L FK + F I  Y+LY +F
Sbjct: 226 LFYIRNKAYINYTYLGFKRSLFMITSYSLYYLF 258


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 446,800,931
Number of Sequences: 1657284
Number of extensions: 7548406
Number of successful extensions: 17360
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 16245
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17342
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 50826451017
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)