Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_pT_K06
         (718 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q6W270 Cluster: Oligopeptide-binding protein; n=3; Rhiz...    35   2.3  
UniRef50_A6PRP4 Cluster: Hybrid cluster protein; n=1; Victivalli...    35   2.3  
UniRef50_Q0BTB2 Cluster: Hypothetical membrane spanning protein;...    34   3.0  
UniRef50_A1RZ32 Cluster: Amidohydrolase; n=1; Thermofilum penden...    33   5.3  
UniRef50_Q54Q79 Cluster: Putative uncharacterized protein; n=1; ...    33   9.3  
UniRef50_Q381Q2 Cluster: Phosphatidylinositol 3-kinase catalytic...    33   9.3  

>UniRef50_Q6W270 Cluster: Oligopeptide-binding protein; n=3;
           Rhizobium|Rep: Oligopeptide-binding protein - Rhizobium
           sp. (strain NGR234)
          Length = 549

 Score = 34.7 bits (76), Expect = 2.3
 Identities = 17/44 (38%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
 Frame = -3

Query: 284 KKENYSLHTQLIT*FII*SI-KEFCQRPLVPTSAHFTLWTSATP 156
           K   ++ HT+L+T  II  +  EF   P++PTS HF   T+  P
Sbjct: 273 KSGEFNAHTELVTSTIIQDLGPEFASGPIIPTSQHFWFNTARKP 316


>UniRef50_A6PRP4 Cluster: Hybrid cluster protein; n=1; Victivallis
           vadensis ATCC BAA-548|Rep: Hybrid cluster protein -
           Victivallis vadensis ATCC BAA-548
          Length = 529

 Score = 34.7 bits (76), Expect = 2.3
 Identities = 17/49 (34%), Positives = 25/49 (51%)
 Frame = -1

Query: 181 SHCGRPQHLEVSLQLDTICQLVFHCGVELDQMRTGCSRAVTYSFLLFTV 35
           S C RP    +    + + ++   CGVE ++  TGC  A   SFLLF +
Sbjct: 91  SACSRP----LPASREDLLEMAERCGVESERQNTGCEMANRLSFLLFAI 135


>UniRef50_Q0BTB2 Cluster: Hypothetical membrane spanning protein;
           n=1; Granulibacter bethesdensis CGDNIH1|Rep:
           Hypothetical membrane spanning protein - Granulobacter
           bethesdensis (strain ATCC BAA-1260 / CGDNIH1)
          Length = 432

 Score = 34.3 bits (75), Expect = 3.0
 Identities = 15/34 (44%), Positives = 21/34 (61%)
 Frame = -3

Query: 206 PLVPTSAHFTLWTSATPGGVAST*YNMSVSVPLR 105
           P +P S    LW +A  GGVA+  Y++  S+PLR
Sbjct: 269 PPMPASREVALWITALAGGVAAACYSIFFSMPLR 302


>UniRef50_A1RZ32 Cluster: Amidohydrolase; n=1; Thermofilum pendens
           Hrk 5|Rep: Amidohydrolase - Thermofilum pendens (strain
           Hrk 5)
          Length = 365

 Score = 33.5 bits (73), Expect = 5.3
 Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
 Frame = +1

Query: 100 LLRNGTLTDILYQVEATPPGVADVH-NVKCADVGTSGRWQNSF 225
           L+  G   D  ++  A  PG +D H + +  DVG  GRW+NS+
Sbjct: 21  LVMPGVSEDFYFE-SAVSPGFSDAHAHPQVVDVGEGGRWRNSY 62


>UniRef50_Q54Q79 Cluster: Putative uncharacterized protein; n=1;
           Dictyostelium discoideum AX4|Rep: Putative
           uncharacterized protein - Dictyostelium discoideum AX4
          Length = 281

 Score = 32.7 bits (71), Expect = 9.3
 Identities = 15/39 (38%), Positives = 25/39 (64%)
 Frame = +3

Query: 6   YKIILDNIKSTVNNRNEYVTAREQPVLIWSSSTPQWNTN 122
           YKIIL +  S +NNR+E +  R  P+ ++ S  P+ N++
Sbjct: 129 YKIILRHYLSGINNRDEDIIQRLNPISMYISIKPKSNSS 167


>UniRef50_Q381Q2 Cluster: Phosphatidylinositol 3-kinase catalytic
           subunit, putative; n=1; Trypanosoma brucei|Rep:
           Phosphatidylinositol 3-kinase catalytic subunit,
           putative - Trypanosoma brucei
          Length = 1160

 Score = 32.7 bits (71), Expect = 9.3
 Identities = 13/23 (56%), Positives = 16/23 (69%), Gaps = 1/23 (4%)
 Frame = +3

Query: 156 RCCGRPQCEVCRCW-YERSLAEL 221
           RCCGR  CE C  W  ++SLA+L
Sbjct: 407 RCCGRRMCEQCTSWMLDKSLAKL 429


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 657,172,131
Number of Sequences: 1657284
Number of extensions: 12317547
Number of successful extensions: 27454
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 26677
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27448
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 57851245060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)