Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_pT_K06
         (718 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_0925 - 32768815-32769654                                         29   2.8  
02_03_0303 - 17506392-17506399,17507055-17507286,17507390-175074...    29   3.7  
02_05_0717 + 31190626-31191234,31191954-31192394,31192699-311928...    28   6.4  
05_06_0231 - 26587900-26587980,26588291-26588356,26588452-265885...    28   8.5  

>02_05_0925 - 32768815-32769654
          Length = 279

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 11/21 (52%), Positives = 13/21 (61%)
 Frame = -3

Query: 206 PLVPTSAHFTLWTSATPGGVA 144
           P  P  AH+ +WTSA PG  A
Sbjct: 160 PPPPPPAHYPMWTSAAPGAFA 180


>02_03_0303 -
           17506392-17506399,17507055-17507286,17507390-17507461,
           17507561-17508586,17509194-17509448,17510483-17510962
          Length = 690

 Score = 29.1 bits (62), Expect = 3.7
 Identities = 14/34 (41%), Positives = 19/34 (55%)
 Frame = -2

Query: 432 SPQAGAVSRCAHDQSETSLLTIITIAKQSGKCST 331
           SPQAG+ +R AH   E S L     A+++ K  T
Sbjct: 15  SPQAGSATRAAHGTGERSALPRYVRAREASKHGT 48


>02_05_0717 + 31190626-31191234,31191954-31192394,31192699-31192802,
            31193000-31194384,31194508-31194548,31195065-31195133,
            31195335-31195435,31195747-31195825,31195939-31196037,
            31196119-31196187,31197609-31197658,31197749-31197925,
            31198045-31198152,31198224-31198290
          Length = 1132

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 18/56 (32%), Positives = 26/56 (46%)
 Frame = -3

Query: 428  PRREPLAGVLMISLKLVYSRLSLLQNSRESVQQTILHLTCFFIIGYRKKKENYSLH 261
            P+  P    +M SLK +   ++  Q  R+ VQQT  +  C F IG R       +H
Sbjct: 1077 PKLRPSFADIMASLKPLLKNMTA-QAPRQRVQQTDDNTNCVFEIGKRDDVSVLGIH 1131


>05_06_0231 -
           26587900-26587980,26588291-26588356,26588452-26588597,
           26589182-26589374,26589465-26589515,26590165-26590311,
           26590365-26590463,26590557-26590760,26590839-26590887,
           26590979-26591074,26591367-26591457,26591753-26591823,
           26592170-26592222,26592740-26592828,26593322-26593517,
           26593975-26594088,26594217-26594291
          Length = 606

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 13/41 (31%), Positives = 23/41 (56%)
 Frame = -3

Query: 416 PLAGVLMISLKLVYSRLSLLQNSRESVQQTILHLTCFFIIG 294
           PL+  LM+ L L ++ + +L     + +QT LH+T    +G
Sbjct: 227 PLSSWLMVGLILGFTMVQILVKMNLTTRQTSLHMTMMHQLG 267


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,339,365
Number of Sequences: 37544
Number of extensions: 326428
Number of successful extensions: 660
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 650
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 660
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1862792824
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)