Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_pT_K02
         (700 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx mori|...    55   1e-06
UniRef50_Q54Q22 Cluster: Putative uncharacterized protein; n=1; ...    34   3.9  
UniRef50_O43993 Cluster: PslA; n=2; Dictyostelium discoideum|Rep...    33   5.1  

>UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx
           mori|Rep: NADPH oxidoreductase - Bombyx mori (Silk moth)
          Length = 191

 Score = 55.2 bits (127), Expect = 1e-06
 Identities = 24/27 (88%), Positives = 25/27 (92%)
 Frame = -2

Query: 600 FKISFFLLLRWVDELTAHLVLSGYWSP 520
           F +S FLLLRWVDELTAHLVLSGYWSP
Sbjct: 149 FCLSRFLLLRWVDELTAHLVLSGYWSP 175


>UniRef50_Q54Q22 Cluster: Putative uncharacterized protein; n=1;
           Dictyostelium discoideum AX4|Rep: Putative
           uncharacterized protein - Dictyostelium discoideum AX4
          Length = 662

 Score = 33.9 bits (74), Expect = 3.9
 Identities = 16/47 (34%), Positives = 25/47 (53%)
 Frame = -2

Query: 645 SYNYVYDSLKSTEIPFKISFFLLLRWVDELTAHLVLSGYWSP*TSTT 505
           +Y  +YD  K+ EI +K S      ++DEL  + ++S  W    STT
Sbjct: 29  NYLLIYDKKKTNEINYKYSLKKFSNYIDELITYSMVSNKWFNFISTT 75


>UniRef50_O43993 Cluster: PslA; n=2; Dictyostelium discoideum|Rep:
            PslA - Dictyostelium discoideum (Slime mold)
          Length = 1269

 Score = 33.5 bits (73), Expect = 5.1
 Identities = 18/58 (31%), Positives = 31/58 (53%)
 Frame = +2

Query: 68   RLFTRSFNENKCNFLQLSRSVCIQQIQICSVRNGTEAIKF*EIPTNHLFGLRNLSLIE 241
            +LF RSF+ +  N    SR  C++   IC +R+   +    +I    ++ L+N SL+E
Sbjct: 893  KLFVRSFSNSNFNEFSSSRLPCLKNSSICRIRSKRHSNTASQI-FKSIYELQNFSLLE 949


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 693,625,349
Number of Sequences: 1657284
Number of extensions: 14245628
Number of successful extensions: 29333
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 28625
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29331
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 55371905986
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)