Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_pT_J23
         (411 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014298-771|AAF46058.2|  123|Drosophila melanogaster CG4111-PA,...   139   2e-33
AE014298-770|AAN09148.1|  123|Drosophila melanogaster CG4111-PB,...   139   2e-33
AY118364-1|AAM48393.1|  123|Drosophila melanogaster RE09547p pro...   138   3e-33
AY122185-1|AAM52697.1|  310|Drosophila melanogaster LD42289p pro...    27   7.3  
AY069555-1|AAL39700.1|  639|Drosophila melanogaster LD28458p pro...    27   7.3  
AE014297-3277|AAF56101.2|  639|Drosophila melanogaster CG31365-P...    27   7.3  
AE014134-1700|AAF52815.1|  304|Drosophila melanogaster CG4036-PA...    27   7.3  
AY061495-1|AAL29043.1|  592|Drosophila melanogaster LD45751p pro...    27   9.7  
AL021728-6|CAA16814.1|  591|Drosophila melanogaster EG:95B7.6 pr...    27   9.7  
AF170448-1|AAD50986.1|  591|Drosophila melanogaster zeste-white ...    27   9.7  
AE014298-457|AAF45819.2|  592|Drosophila melanogaster CG2711-PA ...    27   9.7  

>AE014298-771|AAF46058.2|  123|Drosophila melanogaster CG4111-PA,
           isoform A protein.
          Length = 123

 Score =  139 bits (336), Expect = 2e-33
 Identities = 75/110 (68%), Positives = 80/110 (72%)
 Frame = -3

Query: 349 MGKVKCSELRTKDXXXXXXXXXXXXXXLTNLRVAKVTGGVASKLSKIRVVRKAIARVYIV 170
           M KVKCSELR KD              L +LRVAKVTGG  SKLSKIRVVRKAIARVYIV
Sbjct: 1   MVKVKCSELRIKDKKELTKQLDELKNELLSLRVAKVTGGAPSKLSKIRVVRKAIARVYIV 60

Query: 169 YHQKMKVNLRNHYKNKKYKPLDLRAKKTRAMRKALTKHEAKIKTRKEIRK 20
            HQK K NLR  +KNKKYKPLDLR KKTRA+RKAL+  +A  KT KEIRK
Sbjct: 61  MHQKQKENLRKVFKNKKYKPLDLRKKKTRAIRKALSPRDANRKTLKEIRK 110


>AE014298-770|AAN09148.1|  123|Drosophila melanogaster CG4111-PB,
           isoform B protein.
          Length = 123

 Score =  139 bits (336), Expect = 2e-33
 Identities = 75/110 (68%), Positives = 80/110 (72%)
 Frame = -3

Query: 349 MGKVKCSELRTKDXXXXXXXXXXXXXXLTNLRVAKVTGGVASKLSKIRVVRKAIARVYIV 170
           M KVKCSELR KD              L +LRVAKVTGG  SKLSKIRVVRKAIARVYIV
Sbjct: 1   MVKVKCSELRIKDKKELTKQLDELKNELLSLRVAKVTGGAPSKLSKIRVVRKAIARVYIV 60

Query: 169 YHQKMKVNLRNHYKNKKYKPLDLRAKKTRAMRKALTKHEAKIKTRKEIRK 20
            HQK K NLR  +KNKKYKPLDLR KKTRA+RKAL+  +A  KT KEIRK
Sbjct: 61  MHQKQKENLRKVFKNKKYKPLDLRKKKTRAIRKALSPRDANRKTLKEIRK 110


>AY118364-1|AAM48393.1|  123|Drosophila melanogaster RE09547p
           protein.
          Length = 123

 Score =  138 bits (334), Expect = 3e-33
 Identities = 75/110 (68%), Positives = 80/110 (72%)
 Frame = -3

Query: 349 MGKVKCSELRTKDXXXXXXXXXXXXXXLTNLRVAKVTGGVASKLSKIRVVRKAIARVYIV 170
           M KVKCSELR KD              L +LRVAKVTGG  SKLSKIRVVRKAIARVYIV
Sbjct: 1   MVKVKCSELRIKDKKELTKQLDELKNELLSLRVAKVTGGSPSKLSKIRVVRKAIARVYIV 60

Query: 169 YHQKMKVNLRNHYKNKKYKPLDLRAKKTRAMRKALTKHEAKIKTRKEIRK 20
            HQK K NLR  +KNKKYKPLDLR KKTRA+RKAL+  +A  KT KEIRK
Sbjct: 61  MHQKQKENLRKVFKNKKYKPLDLRKKKTRAIRKALSPRDANRKTLKEIRK 110


>AY122185-1|AAM52697.1|  310|Drosophila melanogaster LD42289p
           protein.
          Length = 310

 Score = 27.5 bits (58), Expect = 7.3
 Identities = 19/68 (27%), Positives = 30/68 (44%)
 Frame = -2

Query: 209 PCCKKSYRTCLHCVSPEDEGQS*KPLQKQEIQAFRFKSQEDPCYAQGSY*TRSKDQDEER 30
           PC  K  RTCL C       ++    Q Q+++A+ +  Q D    Q  + T    +D E 
Sbjct: 12  PCGCKGVRTCLSCEQDFHIAKTSLREQFQQLEAWSYCIQCD--LLQRGWDTNHVQKDHEN 69

Query: 29  DQKESLFP 6
            +K+   P
Sbjct: 70  HKKDEGLP 77


>AY069555-1|AAL39700.1|  639|Drosophila melanogaster LD28458p
           protein.
          Length = 639

 Score = 27.5 bits (58), Expect = 7.3
 Identities = 14/36 (38%), Positives = 23/36 (63%)
 Frame = -3

Query: 109 LDLRAKKTRAMRKALTKHEAKIKTRKEIRKNLSSHL 2
           L+LRAK T  +RK L + E + + RKE+ + + S +
Sbjct: 156 LELRAKLTTELRKELAE-EVRSEVRKELAEEVRSQV 190


>AE014297-3277|AAF56101.2|  639|Drosophila melanogaster CG31365-PA
           protein.
          Length = 639

 Score = 27.5 bits (58), Expect = 7.3
 Identities = 14/36 (38%), Positives = 23/36 (63%)
 Frame = -3

Query: 109 LDLRAKKTRAMRKALTKHEAKIKTRKEIRKNLSSHL 2
           L+LRAK T  +RK L + E + + RKE+ + + S +
Sbjct: 156 LELRAKLTTELRKELAE-EVRSEVRKELAEEVRSQV 190


>AE014134-1700|AAF52815.1|  304|Drosophila melanogaster CG4036-PA
           protein.
          Length = 304

 Score = 27.5 bits (58), Expect = 7.3
 Identities = 19/68 (27%), Positives = 30/68 (44%)
 Frame = -2

Query: 209 PCCKKSYRTCLHCVSPEDEGQS*KPLQKQEIQAFRFKSQEDPCYAQGSY*TRSKDQDEER 30
           PC  K  RTCL C       ++    Q Q+++A+ +  Q D    Q  + T    +D E 
Sbjct: 6   PCGCKGVRTCLSCEQDFHIAKTSLREQFQQLEAWSYCIQCD--LLQRGWDTNHVQKDHEN 63

Query: 29  DQKESLFP 6
            +K+   P
Sbjct: 64  HKKDEGLP 71


>AY061495-1|AAL29043.1|  592|Drosophila melanogaster LD45751p
           protein.
          Length = 592

 Score = 27.1 bits (57), Expect = 9.7
 Identities = 14/58 (24%), Positives = 26/58 (44%)
 Frame = -2

Query: 182 CLHCVSPEDEGQS*KPLQKQEIQAFRFKSQEDPCYAQGSY*TRSKDQDEERDQKESLF 9
           CLHC+   ++  + K +     +  R    E  C +     T S +Q ++ DQ++  F
Sbjct: 66  CLHCLQLLEQAFNFKRMVIDSDELLRLGLDEARCSSFHESQTHSPNQSQQHDQQQQAF 123


>AL021728-6|CAA16814.1|  591|Drosophila melanogaster EG:95B7.6
           protein.
          Length = 591

 Score = 27.1 bits (57), Expect = 9.7
 Identities = 14/58 (24%), Positives = 26/58 (44%)
 Frame = -2

Query: 182 CLHCVSPEDEGQS*KPLQKQEIQAFRFKSQEDPCYAQGSY*TRSKDQDEERDQKESLF 9
           CLHC+   ++  + K +     +  R    E  C +     T S +Q ++ DQ++  F
Sbjct: 65  CLHCLQLLEQAFNFKRMVIDSDELLRLGLDEARCSSFHESQTHSPNQSQQHDQQQQAF 122


>AF170448-1|AAD50986.1|  591|Drosophila melanogaster zeste-white 5
           protein.
          Length = 591

 Score = 27.1 bits (57), Expect = 9.7
 Identities = 14/58 (24%), Positives = 26/58 (44%)
 Frame = -2

Query: 182 CLHCVSPEDEGQS*KPLQKQEIQAFRFKSQEDPCYAQGSY*TRSKDQDEERDQKESLF 9
           CLHC+   ++  + K +     +  R    E  C +     T S +Q ++ DQ++  F
Sbjct: 65  CLHCLQLLEQAFNFKRMVIDSDELLRLGLDEARCSSFHESQTHSPNQSQQHDQQQQAF 122


>AE014298-457|AAF45819.2|  592|Drosophila melanogaster CG2711-PA
           protein.
          Length = 592

 Score = 27.1 bits (57), Expect = 9.7
 Identities = 14/58 (24%), Positives = 26/58 (44%)
 Frame = -2

Query: 182 CLHCVSPEDEGQS*KPLQKQEIQAFRFKSQEDPCYAQGSY*TRSKDQDEERDQKESLF 9
           CLHC+   ++  + K +     +  R    E  C +     T S +Q ++ DQ++  F
Sbjct: 66  CLHCLQLLEQAFNFKRMVIDSDELLRLGLDEARCSSFHESQTHSPNQSQQHDQQQQAF 123


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,955,912
Number of Sequences: 53049
Number of extensions: 231591
Number of successful extensions: 923
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 906
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 920
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1209331668
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)