SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_pT_J19
         (703 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF179181-1|ABN05284.1|  727|Homo sapiens LIM domain binding 3 pr...    31   3.0  
AJ133767-1|CAB46728.1|  617|Homo sapiens ZASP protein protein.         31   3.0  
AB014513-1|BAA31588.1|  734|Homo sapiens KIAA0613 protein protein.     31   3.0  
U70136-1|AAB09089.1| 1404|Homo sapiens megakaryocyte stimulating...    31   4.0  
AL133553-1|CAC36090.1| 1404|Homo sapiens proteoglycan 4 protein.       31   4.0  
AJ133768-1|CAB46729.1|  470|Homo sapiens ZASP protein protein.         31   4.0  
Z82208-1|CAI42768.1| 1711|Homo sapiens BCL6 co-repressor-like 1 ...    30   7.0  
Z82176-1|CAI18757.1|  353|Homo sapiens protein ( Human DNA seque...    30   7.0  
BC055286-1|AAH55286.1|  353|Homo sapiens A4GALT protein protein.       30   7.0  
BC030825-1|AAH30825.1|  972|Homo sapiens C11orf56 protein protein.     30   7.0  
BC017068-1|AAH17068.1|  353|Homo sapiens alpha 1,4-galactosyltra...    30   7.0  
AY950679-1|AAY34147.1|  659|Homo sapiens MEX3C protein.                30   7.0  
AY941797-1|AAX20109.1|  353|Homo sapiens alpha 1,4-galactosyltra...    30   7.0  
AY496235-1|AAS77221.1|  436|Homo sapiens alpha-1,4-galactosyltra...    30   7.0  
AY496234-1|AAS77220.1|  436|Homo sapiens alpha-1,4-galactosyltra...    30   7.0  
AY496233-1|AAS77219.1|  348|Homo sapiens alpha-1,4-galactosyltra...    30   7.0  
AY496232-1|AAS77218.1|  211|Homo sapiens truncated alpha-1,4-gal...    30   7.0  
AY496231-1|AAS77217.1|  281|Homo sapiens truncated alpha-1,4-gal...    30   7.0  
AY496230-1|AAS77216.1|  353|Homo sapiens alpha-1,4-galactosyltra...    30   7.0  
AY496229-1|AAS77215.1|  353|Homo sapiens alpha-1,4-galactosyltra...    30   7.0  
AY496228-1|AAS77214.1|  353|Homo sapiens alpha-1,4-galactosyltra...    30   7.0  
AY496227-1|AAS77213.1|  157|Homo sapiens truncated alpha-1,4-gal...    30   7.0  
AY358074-1|AAQ68076.1|  353|Homo sapiens globotriaosylceramide/C...    30   7.0  
AY166864-1|AAO39152.1|  348|Homo sapiens truncated alpha-1,4-gal...    30   7.0  
AY166863-1|AAO39151.1|  353|Homo sapiens alpha-1,4-galactosyltra...    30   7.0  
AY166862-1|AAO39150.1|  353|Homo sapiens alpha-1,4-galactosyltra...    30   7.0  
AY166861-1|AAO39149.1|  353|Homo sapiens alpha-1,4-galactosyltra...    30   7.0  
AL136450-3|CAI42884.1| 1711|Homo sapiens BCL6 co-repressor-like ...    30   7.0  
AK126225-1|BAC86496.1|  139|Homo sapiens protein ( Homo sapiens ...    30   7.0  
AK074089-1|BAB84915.1| 1696|Homo sapiens FLJ00160 protein protein.     30   7.0  
AK026318-1|BAB15443.1|  705|Homo sapiens protein ( Homo sapiens ...    30   7.0  
AJ245581-1|CAB93532.1|  353|Homo sapiens alpha-4-galactosyltrans...    30   7.0  
AF513329-1|AAP47170.1|  354|Homo sapiens alpha-1,4-galactosyltra...    30   7.0  
AF513328-1|AAP47169.1|  281|Homo sapiens alpha-1,4-galactosyltra...    30   7.0  
AF513325-1|AAP47166.1|  275|Homo sapiens alpha-1,4-galactosyltra...    30   7.0  
AF513324-1|AAP47165.1|  348|Homo sapiens alpha-1,4-galactosyltra...    30   7.0  
AF513323-1|AAP47164.1|  353|Homo sapiens alpha-1,4-galactosyltra...    30   7.0  
AB051546-1|BAB21850.1|  983|Homo sapiens KIAA1759 protein protein.     30   7.0  
AB041418-1|BAA94503.1|  353|Homo sapiens alpha-1,4-N-acetylgluco...    30   7.0  
AB037883-1|BAA95915.1|  353|Homo sapiens Gb3/CD77 synthase protein.    30   7.0  

>EF179181-1|ABN05284.1|  727|Homo sapiens LIM domain binding 3
           protein.
          Length = 727

 Score = 31.5 bits (68), Expect = 3.0
 Identities = 12/35 (34%), Positives = 19/35 (54%)
 Frame = -3

Query: 635 SPTQSSGPSSFTAAPAPLSVPVTAPRHPPTPFQVF 531
           SP  +  P+ +T +PAP   P  AP + P+P   +
Sbjct: 419 SPGANYSPTPYTPSPAPAYTPSPAPAYTPSPVPTY 453


>AJ133767-1|CAB46728.1|  617|Homo sapiens ZASP protein protein.
          Length = 617

 Score = 31.5 bits (68), Expect = 3.0
 Identities = 12/35 (34%), Positives = 19/35 (54%)
 Frame = -3

Query: 635 SPTQSSGPSSFTAAPAPLSVPVTAPRHPPTPFQVF 531
           SP  +  P+ +T +PAP   P  AP + P+P   +
Sbjct: 309 SPGANYSPTPYTPSPAPAYTPSPAPAYTPSPVPTY 343


>AB014513-1|BAA31588.1|  734|Homo sapiens KIAA0613 protein protein.
          Length = 734

 Score = 31.5 bits (68), Expect = 3.0
 Identities = 12/35 (34%), Positives = 19/35 (54%)
 Frame = -3

Query: 635 SPTQSSGPSSFTAAPAPLSVPVTAPRHPPTPFQVF 531
           SP  +  P+ +T +PAP   P  AP + P+P   +
Sbjct: 426 SPGANYSPTPYTPSPAPAYTPSPAPAYTPSPVPTY 460


>U70136-1|AAB09089.1| 1404|Homo sapiens megakaryocyte stimulating
           factor protein.
          Length = 1404

 Score = 31.1 bits (67), Expect = 4.0
 Identities = 15/34 (44%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
 Frame = -3

Query: 641 EVSPTQSSGPSSFTA-APAPLSVPVTAPRHPPTP 543
           E++PT + GP+S T+  PAP +   TAP  P  P
Sbjct: 801 ELAPTTTKGPTSTTSDKPAPTTPKETAPTTPKEP 834


>AL133553-1|CAC36090.1| 1404|Homo sapiens proteoglycan 4 protein.
          Length = 1404

 Score = 31.1 bits (67), Expect = 4.0
 Identities = 15/34 (44%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
 Frame = -3

Query: 641 EVSPTQSSGPSSFTA-APAPLSVPVTAPRHPPTP 543
           E++PT + GP+S T+  PAP +   TAP  P  P
Sbjct: 801 ELAPTTTKGPTSTTSDKPAPTTPKETAPTTPKEP 834


>AJ133768-1|CAB46729.1|  470|Homo sapiens ZASP protein protein.
          Length = 470

 Score = 31.1 bits (67), Expect = 4.0
 Identities = 12/35 (34%), Positives = 18/35 (51%)
 Frame = -3

Query: 635 SPTQSSGPSSFTAAPAPLSVPVTAPRHPPTPFQVF 531
           SP  +  P+ +T  PAP   P  AP + P+P   +
Sbjct: 162 SPGANYSPTPYTPXPAPAYTPSPAPAYTPSPVPTY 196


>Z82208-1|CAI42768.1| 1711|Homo sapiens BCL6 co-repressor-like 1
           protein.
          Length = 1711

 Score = 30.3 bits (65), Expect = 7.0
 Identities = 15/21 (71%), Positives = 17/21 (80%), Gaps = 1/21 (4%)
 Frame = -3

Query: 620 SGPSSFTA-APAPLSVPVTAP 561
           SGP   +A APAPLSVPV+AP
Sbjct: 292 SGPVPLSAPAPAPLSVPVSAP 312


>Z82176-1|CAI18757.1|  353|Homo sapiens protein ( Human DNA sequence
           from clone SC22CB-33B7 on chromosome 22. ).
          Length = 353

 Score = 30.3 bits (65), Expect = 7.0
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = -3

Query: 593 PAPLSVPVTAPRHPPTPFQVFFI 525
           P P   P T P H PTP  +FF+
Sbjct: 60  PCPTLTPPTPPSHGPTPGNIFFL 82


>BC055286-1|AAH55286.1|  353|Homo sapiens A4GALT protein protein.
          Length = 353

 Score = 30.3 bits (65), Expect = 7.0
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = -3

Query: 593 PAPLSVPVTAPRHPPTPFQVFFI 525
           P P   P T P H PTP  +FF+
Sbjct: 60  PCPTLTPPTPPSHGPTPGNIFFL 82


>BC030825-1|AAH30825.1|  972|Homo sapiens C11orf56 protein protein.
          Length = 972

 Score = 30.3 bits (65), Expect = 7.0
 Identities = 12/22 (54%), Positives = 13/22 (59%)
 Frame = -2

Query: 600 RRAGAALGPGHRAPPPADAVPG 535
           R  GA  GPGH  PP  + VPG
Sbjct: 619 RAGGAGEGPGHLPPPQLNGVPG 640


>BC017068-1|AAH17068.1|  353|Homo sapiens alpha
           1,4-galactosyltransferase (globotriaosylceramide
           synthase) protein.
          Length = 353

 Score = 30.3 bits (65), Expect = 7.0
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = -3

Query: 593 PAPLSVPVTAPRHPPTPFQVFFI 525
           P P   P T P H PTP  +FF+
Sbjct: 60  PCPTLTPPTPPSHGPTPGNIFFL 82


>AY950679-1|AAY34147.1|  659|Homo sapiens MEX3C protein.
          Length = 659

 Score = 30.3 bits (65), Expect = 7.0
 Identities = 14/30 (46%), Positives = 16/30 (53%)
 Frame = -3

Query: 632 PTQSSGPSSFTAAPAPLSVPVTAPRHPPTP 543
           P+ SS   +  AAPAPL  P   P  PP P
Sbjct: 2   PSGSSAALALAAAPAPLPQPPPPPPPPPPP 31


>AY941797-1|AAX20109.1|  353|Homo sapiens alpha
           1,4-galactosyltransferase protein.
          Length = 353

 Score = 30.3 bits (65), Expect = 7.0
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = -3

Query: 593 PAPLSVPVTAPRHPPTPFQVFFI 525
           P P   P T P H PTP  +FF+
Sbjct: 60  PCPTLTPPTPPSHGPTPGNIFFL 82


>AY496235-1|AAS77221.1|  436|Homo sapiens
           alpha-1,4-galactosyltransferase protein.
          Length = 436

 Score = 30.3 bits (65), Expect = 7.0
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = -3

Query: 593 PAPLSVPVTAPRHPPTPFQVFFI 525
           P P   P T P H PTP  +FF+
Sbjct: 60  PCPTLTPPTPPSHGPTPGNIFFL 82


>AY496234-1|AAS77220.1|  436|Homo sapiens
           alpha-1,4-galactosyltransferase protein.
          Length = 436

 Score = 30.3 bits (65), Expect = 7.0
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = -3

Query: 593 PAPLSVPVTAPRHPPTPFQVFFI 525
           P P   P T P H PTP  +FF+
Sbjct: 60  PCPTLTPPTPPSHGPTPGNIFFL 82


>AY496233-1|AAS77219.1|  348|Homo sapiens
           alpha-1,4-galactosyltransferase protein.
          Length = 348

 Score = 30.3 bits (65), Expect = 7.0
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = -3

Query: 593 PAPLSVPVTAPRHPPTPFQVFFI 525
           P P   P T P H PTP  +FF+
Sbjct: 60  PCPTLTPPTPPSHGPTPGNIFFL 82


>AY496232-1|AAS77218.1|  211|Homo sapiens truncated
           alpha-1,4-galactosyltransferase protein.
          Length = 211

 Score = 30.3 bits (65), Expect = 7.0
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = -3

Query: 593 PAPLSVPVTAPRHPPTPFQVFFI 525
           P P   P T P H PTP  +FF+
Sbjct: 60  PCPTLTPPTPPSHGPTPGNIFFL 82


>AY496231-1|AAS77217.1|  281|Homo sapiens truncated
           alpha-1,4-galactosyltransferase protein.
          Length = 281

 Score = 30.3 bits (65), Expect = 7.0
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = -3

Query: 593 PAPLSVPVTAPRHPPTPFQVFFI 525
           P P   P T P H PTP  +FF+
Sbjct: 60  PCPTLTPPTPPSHGPTPGNIFFL 82


>AY496230-1|AAS77216.1|  353|Homo sapiens
           alpha-1,4-galactosyltransferase protein.
          Length = 353

 Score = 30.3 bits (65), Expect = 7.0
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = -3

Query: 593 PAPLSVPVTAPRHPPTPFQVFFI 525
           P P   P T P H PTP  +FF+
Sbjct: 60  PCPTLTPPTPPSHGPTPGNIFFL 82


>AY496229-1|AAS77215.1|  353|Homo sapiens
           alpha-1,4-galactosyltransferase protein.
          Length = 353

 Score = 30.3 bits (65), Expect = 7.0
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = -3

Query: 593 PAPLSVPVTAPRHPPTPFQVFFI 525
           P P   P T P H PTP  +FF+
Sbjct: 60  PCPTLTPPTPPSHGPTPGNIFFL 82


>AY496228-1|AAS77214.1|  353|Homo sapiens
           alpha-1,4-galactosyltransferase protein.
          Length = 353

 Score = 30.3 bits (65), Expect = 7.0
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = -3

Query: 593 PAPLSVPVTAPRHPPTPFQVFFI 525
           P P   P T P H PTP  +FF+
Sbjct: 60  PCPTLTPPTPPSHGPTPGNIFFL 82


>AY496227-1|AAS77213.1|  157|Homo sapiens truncated
           alpha-1,4-galactosyltransferase protein.
          Length = 157

 Score = 30.3 bits (65), Expect = 7.0
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = -3

Query: 593 PAPLSVPVTAPRHPPTPFQVFFI 525
           P P   P T P H PTP  +FF+
Sbjct: 60  PCPTLTPPTPPSHGPTPGNIFFL 82


>AY358074-1|AAQ68076.1|  353|Homo sapiens globotriaosylceramide/CD77
           synthase protein.
          Length = 353

 Score = 30.3 bits (65), Expect = 7.0
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = -3

Query: 593 PAPLSVPVTAPRHPPTPFQVFFI 525
           P P   P T P H PTP  +FF+
Sbjct: 60  PCPTLTPPTPPSHGPTPGNIFFL 82


>AY166864-1|AAO39152.1|  348|Homo sapiens truncated
           alpha-1,4-galactosyltransferase protein.
          Length = 348

 Score = 30.3 bits (65), Expect = 7.0
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = -3

Query: 593 PAPLSVPVTAPRHPPTPFQVFFI 525
           P P   P T P H PTP  +FF+
Sbjct: 60  PCPTLTPPTPPSHGPTPGNIFFL 82


>AY166863-1|AAO39151.1|  353|Homo sapiens
           alpha-1,4-galactosyltransferase protein.
          Length = 353

 Score = 30.3 bits (65), Expect = 7.0
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = -3

Query: 593 PAPLSVPVTAPRHPPTPFQVFFI 525
           P P   P T P H PTP  +FF+
Sbjct: 60  PCPTLTPPTPPSHGPTPGNIFFL 82


>AY166862-1|AAO39150.1|  353|Homo sapiens
           alpha-1,4-galactosyltransferase protein.
          Length = 353

 Score = 30.3 bits (65), Expect = 7.0
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = -3

Query: 593 PAPLSVPVTAPRHPPTPFQVFFI 525
           P P   P T P H PTP  +FF+
Sbjct: 60  PCPTLTPPTPPSHGPTPGNIFFL 82


>AY166861-1|AAO39149.1|  353|Homo sapiens
           alpha-1,4-galactosyltransferase protein.
          Length = 353

 Score = 30.3 bits (65), Expect = 7.0
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = -3

Query: 593 PAPLSVPVTAPRHPPTPFQVFFI 525
           P P   P T P H PTP  +FF+
Sbjct: 60  PCPTLTPPTPPSHGPTPGNIFFL 82


>AL136450-3|CAI42884.1| 1711|Homo sapiens BCL6 co-repressor-like 1
           protein.
          Length = 1711

 Score = 30.3 bits (65), Expect = 7.0
 Identities = 15/21 (71%), Positives = 17/21 (80%), Gaps = 1/21 (4%)
 Frame = -3

Query: 620 SGPSSFTA-APAPLSVPVTAP 561
           SGP   +A APAPLSVPV+AP
Sbjct: 292 SGPVPLSAPAPAPLSVPVSAP 312


>AK126225-1|BAC86496.1|  139|Homo sapiens protein ( Homo sapiens
           cDNA FLJ44237 fis, clone THYMU3007845. ).
          Length = 139

 Score = 30.3 bits (65), Expect = 7.0
 Identities = 15/41 (36%), Positives = 18/41 (43%)
 Frame = -2

Query: 576 PGHRAPPPADAVPGLLHPLHDRTQLSYTHNLNTRSLHIHTH 454
           PG R PPP      L+ PLH  + L     L     H H+H
Sbjct: 30  PGRRLPPPPPCCC-LVQPLHGSSSLCQREGLFHHKQHSHSH 69


>AK074089-1|BAB84915.1| 1696|Homo sapiens FLJ00160 protein protein.
          Length = 1696

 Score = 30.3 bits (65), Expect = 7.0
 Identities = 15/21 (71%), Positives = 17/21 (80%), Gaps = 1/21 (4%)
 Frame = -3

Query: 620 SGPSSFTA-APAPLSVPVTAP 561
           SGP   +A APAPLSVPV+AP
Sbjct: 277 SGPVPLSAPAPAPLSVPVSAP 297


>AK026318-1|BAB15443.1|  705|Homo sapiens protein ( Homo sapiens
           cDNA: FLJ22665 fis, clone HSI08219. ).
          Length = 705

 Score = 30.3 bits (65), Expect = 7.0
 Identities = 12/22 (54%), Positives = 13/22 (59%)
 Frame = -2

Query: 600 RRAGAALGPGHRAPPPADAVPG 535
           R  GA  GPGH  PP  + VPG
Sbjct: 544 RAGGAGEGPGHLPPPQLNGVPG 565


>AJ245581-1|CAB93532.1|  353|Homo sapiens
           alpha-4-galactosyltransferase protein.
          Length = 353

 Score = 30.3 bits (65), Expect = 7.0
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = -3

Query: 593 PAPLSVPVTAPRHPPTPFQVFFI 525
           P P   P T P H PTP  +FF+
Sbjct: 60  PCPTLTPPTPPSHGPTPGNIFFL 82


>AF513329-1|AAP47170.1|  354|Homo sapiens
           alpha-1,4-galactosyltransferase protein.
          Length = 354

 Score = 30.3 bits (65), Expect = 7.0
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = -3

Query: 593 PAPLSVPVTAPRHPPTPFQVFFI 525
           P P   P T P H PTP  +FF+
Sbjct: 60  PCPTLTPPTPPSHGPTPGNIFFL 82


>AF513328-1|AAP47169.1|  281|Homo sapiens
           alpha-1,4-galactosyltransferase protein.
          Length = 281

 Score = 30.3 bits (65), Expect = 7.0
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = -3

Query: 593 PAPLSVPVTAPRHPPTPFQVFFI 525
           P P   P T P H PTP  +FF+
Sbjct: 60  PCPTLTPPTPPSHGPTPGNIFFL 82


>AF513325-1|AAP47166.1|  275|Homo sapiens
           alpha-1,4-galactosyltransferase protein.
          Length = 275

 Score = 30.3 bits (65), Expect = 7.0
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = -3

Query: 593 PAPLSVPVTAPRHPPTPFQVFFI 525
           P P   P T P H PTP  +FF+
Sbjct: 60  PCPTLTPPTPPSHGPTPGNIFFL 82


>AF513324-1|AAP47165.1|  348|Homo sapiens
           alpha-1,4-galactosyltransferase protein.
          Length = 348

 Score = 30.3 bits (65), Expect = 7.0
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = -3

Query: 593 PAPLSVPVTAPRHPPTPFQVFFI 525
           P P   P T P H PTP  +FF+
Sbjct: 60  PCPTLTPPTPPSHGPTPGNIFFL 82


>AF513323-1|AAP47164.1|  353|Homo sapiens
           alpha-1,4-galactosyltransferase protein.
          Length = 353

 Score = 30.3 bits (65), Expect = 7.0
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = -3

Query: 593 PAPLSVPVTAPRHPPTPFQVFFI 525
           P P   P T P H PTP  +FF+
Sbjct: 60  PCPTLTPPTPPSHGPTPGNIFFL 82


>AB051546-1|BAB21850.1|  983|Homo sapiens KIAA1759 protein protein.
          Length = 983

 Score = 30.3 bits (65), Expect = 7.0
 Identities = 12/22 (54%), Positives = 13/22 (59%)
 Frame = -2

Query: 600 RRAGAALGPGHRAPPPADAVPG 535
           R  GA  GPGH  PP  + VPG
Sbjct: 630 RAGGAGEGPGHLPPPQLNGVPG 651


>AB041418-1|BAA94503.1|  353|Homo sapiens
           alpha-1,4-N-acetylglucosaminyltransferase/alpha-
           1,4-galactosyltransferase protein.
          Length = 353

 Score = 30.3 bits (65), Expect = 7.0
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = -3

Query: 593 PAPLSVPVTAPRHPPTPFQVFFI 525
           P P   P T P H PTP  +FF+
Sbjct: 60  PCPTLTPPTPPSHGPTPGNIFFL 82


>AB037883-1|BAA95915.1|  353|Homo sapiens Gb3/CD77 synthase protein.
          Length = 353

 Score = 30.3 bits (65), Expect = 7.0
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = -3

Query: 593 PAPLSVPVTAPRHPPTPFQVFFI 525
           P P   P T P H PTP  +FF+
Sbjct: 60  PCPTLTPPTPPSHGPTPGNIFFL 82


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,118,909
Number of Sequences: 237096
Number of extensions: 1772240
Number of successful extensions: 7234
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 6038
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7128
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8119219030
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -