Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P17_pT_J17
(683 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U53148-1|AAB37071.1| 175|Caenorhabditis elegans Hypothetical pr... 80 1e-15
Z71261-3|CAA95802.1| 130|Caenorhabditis elegans Hypothetical pr... 54 1e-07
AL132860-11|CAB60517.1| 440|Caenorhabditis elegans Hypothetical... 34 0.082
AF069986-1|AAC39136.1| 440|Caenorhabditis elegans nitrilase and... 34 0.082
U55365-8|AAA98573.2| 383|Caenorhabditis elegans Hypothetical pr... 28 7.1
U80455-8|AAB37886.1| 337|Caenorhabditis elegans Hypothetical pr... 27 9.4
AC087081-5|AAK66038.1| 273|Caenorhabditis elegans Hypothetical ... 27 9.4
>U53148-1|AAB37071.1| 175|Caenorhabditis elegans Hypothetical
protein C26F1.7 protein.
Length = 175
Score = 80.2 bits (189), Expect = 1e-15
Identities = 47/119 (39%), Positives = 63/119 (52%), Gaps = 7/119 (5%)
Frame = -3
Query: 657 SSCIFCNIANKLEGTEILYEDDEVCVFRDIKPASRFHILTIPKRHIEDVKSLTSADKELL 478
+ C FC+I + + L E+ V DIKP ++ H L + K+HI LT AD LL
Sbjct: 9 NGCKFCDIVKNKKELQ-LKENKSCVVINDIKPKAKNHYLVLSKQHIAKPTDLTVADVPLL 67
Query: 477 NRMMSISRELLSKNNL------SIEDA-RFGYHWPPFRSVKHLHLHTIAPESEMGFIGR 322
M RELL ++ ++ED R G+H PP SV HLH+H I P S+MG I R
Sbjct: 68 EEMEKTGRELLREHLKKKGEADTVEDMLRIGFHLPPLLSVHHLHMHIIYPISDMGLISR 126
>Z71261-3|CAA95802.1| 130|Caenorhabditis elegans Hypothetical
protein F21C3.3 protein.
Length = 130
Score = 53.6 bits (123), Expect = 1e-07
Identities = 31/104 (29%), Positives = 55/104 (52%), Gaps = 6/104 (5%)
Frame = -3
Query: 648 IFCNIANKLEGTEILYEDDEVCVFRDIKPASRFHILTIPKRHIEDVKSLTSADKELLNRM 469
+F I K +I++EDDE F D+ P + H L IPKR I+ +++ +D L+ ++
Sbjct: 22 LFGKIIRKEIPAKIIFEDDEALAFHDVSPQAPIHFLVIPKRRIDMLENAVDSDAALIGKL 81
Query: 468 M----SISRELLSKN--NLSIEDARFGYHWPPFRSVKHLHLHTI 355
M ++++L N + + + + G +SV HLHLH +
Sbjct: 82 MVTASKVAKQLGMANGYRVVVNNGKDG-----AQSVFHLHLHVL 120
>AL132860-11|CAB60517.1| 440|Caenorhabditis elegans Hypothetical
protein Y56A3A.13 protein.
Length = 440
Score = 34.3 bits (75), Expect = 0.082
Identities = 29/111 (26%), Positives = 49/111 (44%), Gaps = 1/111 (0%)
Frame = -3
Query: 609 ILYEDDEVCVFRDIKPASRFHILTIPKRHIEDVKSLTSADKELLNRMMSISRELLSK-NN 433
I Y VF ++KP + H+L PKR + + LT A+ L + + +L K +N
Sbjct: 311 IFYSTPHSFVFVNLKPVTDGHVLVSPKRVVPRLTDLTDAETADLFIVAKKVQAMLEKHHN 370
Query: 432 LSIEDARFGYHWPPFRSVKHLHLHTIAPESEMGFIGRVIFKKNSYWFVSPE 280
++ ++V H+H+H I P F I++K + PE
Sbjct: 371 VTSTTICVQDGKDAGQTVPHVHIH-ILPRRAGDFGDNEIYQKLASHDKEPE 420
>AF069986-1|AAC39136.1| 440|Caenorhabditis elegans nitrilase and
fragile histidinetriad fusion protein NitFhit protein.
Length = 440
Score = 34.3 bits (75), Expect = 0.082
Identities = 29/111 (26%), Positives = 49/111 (44%), Gaps = 1/111 (0%)
Frame = -3
Query: 609 ILYEDDEVCVFRDIKPASRFHILTIPKRHIEDVKSLTSADKELLNRMMSISRELLSK-NN 433
I Y VF ++KP + H+L PKR + + LT A+ L + + +L K +N
Sbjct: 311 IFYSTPHSFVFVNLKPVTDGHVLVSPKRVVPRLTDLTDAETADLFIVAKKVQAMLEKHHN 370
Query: 432 LSIEDARFGYHWPPFRSVKHLHLHTIAPESEMGFIGRVIFKKNSYWFVSPE 280
++ ++V H+H+H I P F I++K + PE
Sbjct: 371 VTSTTICVQDGKDAGQTVPHVHIH-ILPRRAGDFGDNEIYQKLASHDKEPE 420
>U55365-8|AAA98573.2| 383|Caenorhabditis elegans Hypothetical
protein C12D5.2 protein.
Length = 383
Score = 27.9 bits (59), Expect = 7.1
Identities = 14/51 (27%), Positives = 25/51 (49%)
Frame = -2
Query: 376 TFASAYYSA*IRDGIHWKSDIQKKLLLVCFAGICRLYFNVKCNWSLNKLFY 224
TFA +Y+ +R G+H+ + K++ +C I L N + + FY
Sbjct: 267 TFAMVFYAL-MRVGVHYIEYLLLKMIFICNPAIPNLSSNAQYKLEKGRSFY 316
>U80455-8|AAB37886.1| 337|Caenorhabditis elegans Hypothetical
protein T01D1.5 protein.
Length = 337
Score = 27.5 bits (58), Expect = 9.4
Identities = 18/66 (27%), Positives = 29/66 (43%)
Frame = -3
Query: 546 ILTIPKRHIEDVKSLTSADKELLNRMMSISRELLSKNNLSIEDARFGYHWPPFRSVKHLH 367
++T+ R+I+ V+ +N + S+ LLSK D F P SV +
Sbjct: 51 VVTLQTRYIDKVQENLILYNAAMNGLFSLCA-LLSKQEFLFGDRSFTIRAKPHSSVLAPY 109
Query: 366 LHTIAP 349
+H I P
Sbjct: 110 IHCIQP 115
>AC087081-5|AAK66038.1| 273|Caenorhabditis elegans Hypothetical
protein Y82E9BL.15 protein.
Length = 273
Score = 27.5 bits (58), Expect = 9.4
Identities = 17/57 (29%), Positives = 28/57 (49%)
Frame = -3
Query: 609 ILYEDDEVCVFRDIKPASRFHILTIPKRHIEDVKSLTSADKELLNRMMSISRELLSK 439
IL D+ C+F ++ S+FH T+ HI S LL ++I+ ++L K
Sbjct: 5 ILGIDNVTCLFETMEN-SKFHTFTLIFPHISLKSKKMSGSPTLLELPITIANQILEK 60
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,962,206
Number of Sequences: 27780
Number of extensions: 304805
Number of successful extensions: 585
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 571
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 584
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1560745544
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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