Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P17_pT_J09
(651 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_04_0015 + 22164889-22165000,22165135-22165167,22165992-221662... 36 0.037
03_06_0465 - 34130083-34130340,34130421-34130541,34131158-341311... 35 0.065
09_04_0330 + 16731390-16731699,16731774-16732080,16732182-167335... 34 0.085
07_03_1219 + 24960043-24960133,24960304-24960336,24962258-249624... 33 0.15
05_01_0459 - 3637741-3637995,3638078-3638204,3641273-3641495,364... 33 0.26
07_01_0891 - 7447079-7447330,7447431-7447554,7449571-7449793,744... 32 0.34
02_04_0268 + 21435231-21435240,21435330-21435558,21435778-214358... 32 0.34
01_06_1536 + 38075023-38075359,38075834-38075963,38076204-380764... 31 0.60
11_01_0800 - 7047425-7048253,7048340-7048927,7049050-7049268,704... 31 1.1
08_02_0840 + 21715077-21716962,21717541-21717814,21718265-21718579 29 2.4
04_01_0617 - 8076624-8076971,8077761-8077883,8077965-8078035,807... 29 2.4
12_02_0683 + 22006770-22006935,22007030-22007274,22007524-220077... 29 4.2
11_06_0496 - 24325587-24326143,24326658-24327495,24327612-24327764 29 4.2
01_01_1018 - 8046819-8046876,8046995-8047212,8048099-8048177,804... 29 4.2
07_03_1696 - 28779455-28779733,28779813-28780074,28780805-287809... 28 5.6
01_06_0895 - 32804433-32804744,32804948-32805163,32805301-328056... 28 5.6
06_03_0420 + 20593468-20593719,20594534-20594581,20595155-20595970 28 7.4
01_06_1602 - 38559661-38559936,38560008-38560137,38562550-385627... 28 7.4
02_04_0103 - 19768288-19768737 27 9.8
>04_04_0015 +
22164889-22165000,22165135-22165167,22165992-22166220,
22166709-22166826,22166910-22167188
Length = 256
Score = 35.5 bits (78), Expect = 0.037
Identities = 24/76 (31%), Positives = 32/76 (42%), Gaps = 5/76 (6%)
Frame = -3
Query: 433 HKVGNKKIKR--TENKHQAKRLAKXXXXXXXXXXXEDGDWA---CIYCGYLY*ESTEGWA 269
+K G+K KR +++K Q + AK D D A C CG Y + E W
Sbjct: 159 NKSGSKPPKRPNSDSKPQKQVQAKYEEENGGRGNGGDEDQAETICGACGEAY-ANGEFWI 217
Query: 268 ICSICHGWAHDSCAEV 221
C IC W H C +
Sbjct: 218 CCDICETWFHGKCVRI 233
>03_06_0465 -
34130083-34130340,34130421-34130541,34131158-34131186,
34132259-34132382,34132594-34132816,34132948-34132980,
34133106-34133208
Length = 296
Score = 34.7 bits (76), Expect = 0.065
Identities = 18/48 (37%), Positives = 20/48 (41%)
Frame = -3
Query: 316 CIYCGYLY*ESTEGWAICSICHGWAHDSCAEVDEEDDEAHICERCLPD 173
C CG LY + E W C IC W H C + E HI PD
Sbjct: 240 CGTCGGLY-NANEFWIGCDICERWFHGKCVRITPAKAE-HIKHYKCPD 285
>09_04_0330 +
16731390-16731699,16731774-16732080,16732182-16733561,
16734064-16734112
Length = 681
Score = 34.3 bits (75), Expect = 0.085
Identities = 14/36 (38%), Positives = 18/36 (50%), Gaps = 2/36 (5%)
Frame = -3
Query: 280 EGWAICSICHGWAHDSCAEVDEEDDEAHI--CERCL 179
E A C IC W H CA + + +D H+ C R L
Sbjct: 633 ERMACCDICEAWQHTRCAGIADTEDAPHVFLCSRGL 668
>07_03_1219 +
24960043-24960133,24960304-24960336,24962258-24962486,
24963183-24963309,24963530-24963869,24964806-24965095
Length = 369
Score = 33.5 bits (73), Expect = 0.15
Identities = 13/36 (36%), Positives = 17/36 (47%)
Frame = -3
Query: 328 GDWACIYCGYLY*ESTEGWAICSICHGWAHDSCAEV 221
G+ C CG Y + E W C IC W H C ++
Sbjct: 208 GETLCGACGESY-GADEFWICCDICEKWFHGKCVKI 242
>05_01_0459 -
3637741-3637995,3638078-3638204,3641273-3641495,
3641592-3641624,3641716-3641854
Length = 258
Score = 32.7 bits (71), Expect = 0.26
Identities = 14/40 (35%), Positives = 20/40 (50%), Gaps = 3/40 (7%)
Frame = -3
Query: 331 DGDWA---CIYCGYLY*ESTEGWAICSICHGWAHDSCAEV 221
DGD + C CG +Y + E W C +C W H C ++
Sbjct: 197 DGDHSETLCGTCGGIY-SADEFWIGCDVCERWYHGKCVKI 235
>07_01_0891 -
7447079-7447330,7447431-7447554,7449571-7449793,
7449891-7449923,7450042-7450144
Length = 244
Score = 32.3 bits (70), Expect = 0.34
Identities = 17/48 (35%), Positives = 19/48 (39%)
Frame = -3
Query: 316 CIYCGYLY*ESTEGWAICSICHGWAHDSCAEVDEEDDEAHICERCLPD 173
C CG Y + E W C IC W H C + E HI PD
Sbjct: 190 CGTCGGRY-NANEFWIGCDICERWFHGKCVRITPAKAE-HIKHYKCPD 235
>02_04_0268 +
21435231-21435240,21435330-21435558,21435778-21435898,
21435992-21436264
Length = 210
Score = 32.3 bits (70), Expect = 0.34
Identities = 12/37 (32%), Positives = 16/37 (43%)
Frame = -3
Query: 331 DGDWACIYCGYLY*ESTEGWAICSICHGWAHDSCAEV 221
D + C CG Y + E W C +C W H C +
Sbjct: 152 DQAYMCGACGETY-ANGEFWICCDVCEKWFHGKCVRI 187
>01_06_1536 +
38075023-38075359,38075834-38075963,38076204-38076419,
38076520-38077137,38077226-38078075
Length = 716
Score = 31.5 bits (68), Expect = 0.60
Identities = 11/30 (36%), Positives = 16/30 (53%), Gaps = 2/30 (6%)
Frame = -3
Query: 265 CSICHGWAHDSCAEVDEEDD--EAHICERC 182
C +C W H C+ + + DD E IC +C
Sbjct: 638 CDVCGVWQHTRCSGISDFDDVPEKFICRKC 667
>11_01_0800 -
7047425-7048253,7048340-7048927,7049050-7049268,
7049398-7049518,7050593-7050983
Length = 715
Score = 30.7 bits (66), Expect = 1.1
Identities = 10/30 (33%), Positives = 16/30 (53%), Gaps = 2/30 (6%)
Frame = -3
Query: 265 CSICHGWAHDSCAEVDEED--DEAHICERC 182
C CH W H CA + + D + ++C+ C
Sbjct: 643 CDTCHMWMHTRCAGISDFDRVPKRYVCKSC 672
>08_02_0840 + 21715077-21716962,21717541-21717814,21718265-21718579
Length = 824
Score = 29.5 bits (63), Expect = 2.4
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = -1
Query: 381 KDSPKKSNRNIVHLNWRTVTGP 316
+DSP +S + + H NW+ + GP
Sbjct: 632 RDSPWESCKLVTHFNWKNIAGP 653
>04_01_0617 -
8076624-8076971,8077761-8077883,8077965-8078035,
8078108-8078360,8078613-8078768,8078854-8079770,
8079858-8079927,8082310-8082416,8082722-8082755,
8083621-8083940,8084031-8084820,8084890-8085046,
8085647-8086068
Length = 1255
Score = 29.5 bits (63), Expect = 2.4
Identities = 15/51 (29%), Positives = 18/51 (35%), Gaps = 1/51 (1%)
Frame = -3
Query: 331 DGDWAC-IYCGYLY*ESTEGWAICSICHGWAHDSCAEVDEEDDEAHICERC 182
DG W CG Y + E C C+ W H CA + C C
Sbjct: 244 DGSWTVDCSCGITY-DDGEEMVSCDECNVWVHTRCARYVRGVHISFSCHNC 293
>12_02_0683 +
22006770-22006935,22007030-22007274,22007524-22007727,
22007847-22007939,22008015-22008107,22008196-22008537,
22008675-22008737,22008812-22008892
Length = 428
Score = 28.7 bits (61), Expect = 4.2
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = -3
Query: 493 DSPLNEETDMAGEDWRKKRIHKVGNKKIKRTENK 392
DS NEET + GE K++ K ++I+ ENK
Sbjct: 337 DSSSNEETHVRGEVGELKKLVKTLGQRIEELENK 370
>11_06_0496 - 24325587-24326143,24326658-24327495,24327612-24327764
Length = 515
Score = 28.7 bits (61), Expect = 4.2
Identities = 12/36 (33%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Frame = -3
Query: 316 CIYC-GYLY*ESTEGWAICSICHGWAHDSCAEVDEE 212
C+ C G+ + +T W C C W H CA +E+
Sbjct: 195 CVVCNGFDFDVNTCRWIGCDGCSHWTHAGCAIREEQ 230
>01_01_1018 -
8046819-8046876,8046995-8047212,8048099-8048177,
8048455-8048540,8048698-8048983,8049063-8049205,
8049308-8049508,8049626-8049754,8050463-8050738,
8050823-8051098,8051364-8052364,8052452-8052634,
8052865-8052937,8053205-8053313,8053622-8053785
Length = 1093
Score = 28.7 bits (61), Expect = 4.2
Identities = 13/36 (36%), Positives = 17/36 (47%), Gaps = 3/36 (8%)
Frame = -3
Query: 280 EGWAICSICHGWAHDSCAEVDEE--DDEA-HICERC 182
E W C C W H CA + + D EA + C +C
Sbjct: 601 EWWVQCDKCKAWQHQICALFNPKIVDPEAEYTCAKC 636
>07_03_1696 -
28779455-28779733,28779813-28780074,28780805-28780956,
28781765-28781961,28782258-28782462,28782737-28782982,
28783603-28783719,28784206-28784397,28784480-28784693,
28784835-28784926,28784952-28785001,28785494-28785812,
28785908-28786068,28786407-28786650,28787212-28787467,
28787634-28787834,28788568-28788910,28789003-28789064,
28789645-28789851,28790170-28790978
Length = 1535
Score = 28.3 bits (60), Expect = 5.6
Identities = 10/27 (37%), Positives = 13/27 (48%)
Frame = -3
Query: 274 WAICSICHGWAHDSCAEVDEEDDEAHI 194
W C IC W H SC + +E H+
Sbjct: 422 WIQCDICDAWQHASCVGYSPK-EEMHV 447
>01_06_0895 -
32804433-32804744,32804948-32805163,32805301-32805642,
32805778-32806020,32806130-32806582,32806898-32807113,
32808360-32808432,32808750-32808790,32809027-32809118,
32809222-32809333,32810003-32810078,32810154-32810301,
32811195-32811336,32812120-32812196,32813568-32813619
Length = 864
Score = 28.3 bits (60), Expect = 5.6
Identities = 13/37 (35%), Positives = 16/37 (43%)
Frame = -3
Query: 208 DEAHICERCLPD*NTYSFCPVPFPXLPRPWGKTGNXP 98
D + +R + D TY P P P PWG G P
Sbjct: 677 DMLAVAQREIGDEVTYGVVKEPIPVGPGPWGGEGGKP 713
>06_03_0420 + 20593468-20593719,20594534-20594581,20595155-20595970
Length = 371
Score = 27.9 bits (59), Expect = 7.4
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +1
Query: 568 LLSSYRNQCRHPQYHELFLHGGGTS 642
L SSY + + PQ H L+ +GG S
Sbjct: 176 LSSSYASSSKFPQLHHLYFNGGSIS 200
>01_06_1602 -
38559661-38559936,38560008-38560137,38562550-38562778,
38563627-38563659,38563746-38563896
Length = 272
Score = 27.9 bits (59), Expect = 7.4
Identities = 23/87 (26%), Positives = 33/87 (37%), Gaps = 1/87 (1%)
Frame = -3
Query: 430 KVGNKKIKRTENKHQAKRLAKXXXXXXXXXXXEDGD-WACIYCGYLY*ESTEGWAICSIC 254
KV +K R+++K A + + +D D C CG E W C C
Sbjct: 180 KVQSKAESRSKSKLSAPKDEEGSGDDEGEEEEDDHDNTLCGTCG-TNDGKDEFWICCDNC 238
Query: 253 HGWAHDSCAEVDEEDDEAHICERCLPD 173
W H C ++ E HI + PD
Sbjct: 239 EKWYHGKCVKITPARAE-HIKQYKCPD 264
>02_04_0103 - 19768288-19768737
Length = 149
Score = 27.5 bits (58), Expect = 9.8
Identities = 15/46 (32%), Positives = 23/46 (50%)
Frame = -3
Query: 505 RNHIDSPLNEETDMAGEDWRKKRIHKVGNKKIKRTENKHQAKRLAK 368
R ID P+ E+ + RKK+ K KK K+ + K + K+ K
Sbjct: 93 RGWIDGPMREKRRRKRKRKRKKKKKKKKKKKKKKKKKKKKKKKKKK 138
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,081,833
Number of Sequences: 37544
Number of extensions: 318900
Number of successful extensions: 838
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 819
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 838
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1620349964
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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