Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P17_pT_J09
(651 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z35595-5|CAA84636.1| 952|Caenorhabditis elegans Hypothetical pr... 32 0.41
L13200-2|ABE73330.1| 810|Caenorhabditis elegans Hypothetical pr... 29 2.2
L13200-1|AAA28193.1| 1000|Caenorhabditis elegans Hypothetical pr... 29 2.2
Z49909-2|CAB60994.1| 375|Caenorhabditis elegans Hypothetical pr... 29 2.9
AF058329-1|AAD20727.1| 375|Caenorhabditis elegans unknown protein. 29 2.9
Z79695-4|CAB01969.3| 374|Caenorhabditis elegans Hypothetical pr... 28 5.0
Z69302-8|CAA93261.3| 420|Caenorhabditis elegans Hypothetical pr... 28 5.0
U97009-2|AAC69029.3| 342|Caenorhabditis elegans Serpentine rece... 28 5.0
AF002197-2|AAB53983.2| 486|Caenorhabditis elegans Hypothetical ... 28 5.0
Z49967-7|CAA90257.1| 740|Caenorhabditis elegans Hypothetical pr... 28 6.6
U41104-5|AAK18976.3| 1564|Caenorhabditis elegans Twik family of ... 28 6.6
U23529-12|AAL13323.1| 561|Caenorhabditis elegans Cation diffusi... 28 6.6
U23529-11|AAK39165.1| 519|Caenorhabditis elegans Cation diffusi... 28 6.6
U70854-5|AAB09157.1| 589|Caenorhabditis elegans Dnaj domain (pr... 27 8.7
AC024799-6|AAK72315.1| 306|Caenorhabditis elegans Serpentine re... 27 8.7
>Z35595-5|CAA84636.1| 952|Caenorhabditis elegans Hypothetical
protein C01G6.5 protein.
Length = 952
Score = 31.9 bits (69), Expect = 0.41
Identities = 12/31 (38%), Positives = 16/31 (51%), Gaps = 3/31 (9%)
Frame = -3
Query: 274 WAICSICHGWAHDSCAEVDE---EDDEAHIC 191
W CSIC+ W H C +D +DE +C
Sbjct: 886 WVSCSICNQWFHVWCVRLDNVCYREDETFLC 916
>L13200-2|ABE73330.1| 810|Caenorhabditis elegans Hypothetical
protein ZK1236.3b protein.
Length = 810
Score = 29.5 bits (63), Expect = 2.2
Identities = 11/33 (33%), Positives = 16/33 (48%)
Frame = -1
Query: 216 KKTTRHTFVNAVCPIKIRTPFAPYHFPXYPVHG 118
K+T +T+V P + P+HFP Y G
Sbjct: 586 KQTYNNTYVTVASPATLTNSIIPWHFPPYEKSG 618
>L13200-1|AAA28193.1| 1000|Caenorhabditis elegans Hypothetical
protein ZK1236.3a protein.
Length = 1000
Score = 29.5 bits (63), Expect = 2.2
Identities = 11/33 (33%), Positives = 16/33 (48%)
Frame = -1
Query: 216 KKTTRHTFVNAVCPIKIRTPFAPYHFPXYPVHG 118
K+T +T+V P + P+HFP Y G
Sbjct: 776 KQTYNNTYVTVASPATLTNSIIPWHFPPYEKSG 808
>Z49909-2|CAB60994.1| 375|Caenorhabditis elegans Hypothetical
protein C14A4.2 protein.
Length = 375
Score = 29.1 bits (62), Expect = 2.9
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = -3
Query: 526 IAYQLAQRNHIDSPLNEETDMAGE 455
+A QL RNH+ +PL+++ D GE
Sbjct: 43 VAKQLNMRNHLPAPLSKQMDTLGE 66
>AF058329-1|AAD20727.1| 375|Caenorhabditis elegans unknown protein.
Length = 375
Score = 29.1 bits (62), Expect = 2.9
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = -3
Query: 526 IAYQLAQRNHIDSPLNEETDMAGE 455
+A QL RNH+ +PL+++ D GE
Sbjct: 43 VAKQLNMRNHLPAPLSKQMDTLGE 66
>Z79695-4|CAB01969.3| 374|Caenorhabditis elegans Hypothetical
protein F27D4.4a protein.
Length = 374
Score = 28.3 bits (60), Expect = 5.0
Identities = 17/54 (31%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Frame = -3
Query: 526 IAYQLAQRN-HIDSPLNEETDMAGEDWRKKRIHKVGNKKIKRTENKHQAKRLAK 368
+A + A++N + DS E+ + E+W ++++V NKK K NKH + K
Sbjct: 118 VAQKTAKKNLYADSREVEKDEETNENWDSDKLNEVVNKKNK---NKHMIDIVCK 168
>Z69302-8|CAA93261.3| 420|Caenorhabditis elegans Hypothetical
protein F40F8.5 protein.
Length = 420
Score = 28.3 bits (60), Expect = 5.0
Identities = 13/46 (28%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
Frame = -3
Query: 508 QRNHIDSPLNEETDMAGEDWRKKRI--HKVGNKKIKRTENKHQAKR 377
+RNH D P + D G + R++R H + + T + H+ +R
Sbjct: 255 KRNHDDDPSDTTIDHTGHNHRRRRSEDHDPNDPNVDHTGHNHRRRR 300
>U97009-2|AAC69029.3| 342|Caenorhabditis elegans Serpentine
receptor, class d (delta)protein 33 protein.
Length = 342
Score = 28.3 bits (60), Expect = 5.0
Identities = 28/101 (27%), Positives = 45/101 (44%), Gaps = 21/101 (20%)
Frame = +2
Query: 365 FFGESFSLM-------LVFSSFYLLISNFVYSFF----------TPIFSCHVGFFIKWAI 493
FFGE FS M L +SF L+ + +Y +F T I C +G+F + I
Sbjct: 102 FFGEWFSYMSYVGILHLSLNSFISLMLSMIYRYFSIRFKRFTANTSIILCIIGYFFPFLI 161
Query: 494 YM----ISLSQLISY*TKLFSG*PCFLHTYLVVTGISVVIH 604
+ I++S +S+ T + G L +Y +V + H
Sbjct: 162 FASCSNIAISSSLSFNTAVLDGMVENLESYHMVLTTEISNH 202
>AF002197-2|AAB53983.2| 486|Caenorhabditis elegans Hypothetical
protein F20H11.1 protein.
Length = 486
Score = 28.3 bits (60), Expect = 5.0
Identities = 11/31 (35%), Positives = 14/31 (45%)
Frame = -3
Query: 316 CIYCGYLY*ESTEGWAICSICHGWAHDSCAE 224
C C + + W C +C AHD CAE
Sbjct: 176 CEVCMHTIWRLVQWWRRCRVCGMRAHDKCAE 206
>Z49967-7|CAA90257.1| 740|Caenorhabditis elegans Hypothetical
protein F54C9.9 protein.
Length = 740
Score = 27.9 bits (59), Expect = 6.6
Identities = 13/40 (32%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = -3
Query: 484 LNEETDMAGEDW-RKKRIHKVGNKKIKRTENKHQAKRLAK 368
+N++ D ED +KK+ K G KK+K TE ++ + + +
Sbjct: 622 MNDQNDNTEEDAEKKKKKKKRGKKKVKLTETENPEENMTE 661
>U41104-5|AAK18976.3| 1564|Caenorhabditis elegans Twik family of
potassium channelsprotein 2 protein.
Length = 1564
Score = 27.9 bits (59), Expect = 6.6
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = -3
Query: 478 EETDMAGEDWRKKRIHKVGNKKIKRTENK 392
EE D G D +KR H+ GNK+ R K
Sbjct: 58 EEADETGGDSERKRRHRHGNKRGDRGSEK 86
>U23529-12|AAL13323.1| 561|Caenorhabditis elegans Cation diffusion
facilitator familyprotein 1, isoform b protein.
Length = 561
Score = 27.9 bits (59), Expect = 6.6
Identities = 20/46 (43%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = +2
Query: 137 GKWYGAKGV-RILIGQTAFTNVCLVVFFIYFGTGIVCPTMANTADS 271
GK KGV R LI Q T + + FI TG+VC ++A ADS
Sbjct: 101 GKSESVKGVSRSLIIQIGMTVIFCALEFI---TGVVCSSIAMLADS 143
>U23529-11|AAK39165.1| 519|Caenorhabditis elegans Cation diffusion
facilitator familyprotein 1, isoform a protein.
Length = 519
Score = 27.9 bits (59), Expect = 6.6
Identities = 20/46 (43%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = +2
Query: 137 GKWYGAKGV-RILIGQTAFTNVCLVVFFIYFGTGIVCPTMANTADS 271
GK KGV R LI Q T + + FI TG+VC ++A ADS
Sbjct: 59 GKSESVKGVSRSLIIQIGMTVIFCALEFI---TGVVCSSIAMLADS 101
>U70854-5|AAB09157.1| 589|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 11 protein.
Length = 589
Score = 27.5 bits (58), Expect = 8.7
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = -3
Query: 490 SPLNEETDMAGEDWRKKRIHKVGNKKIKRTENKHQAKRLAK 368
S L+EE GED ++R + NK + K +AKR+ K
Sbjct: 238 SYLDEEDKERGEDRYERREMEKQNKAERERRRKEEAKRIRK 278
>AC024799-6|AAK72315.1| 306|Caenorhabditis elegans Serpentine
receptor, class x protein5 protein.
Length = 306
Score = 27.5 bits (58), Expect = 8.7
Identities = 18/59 (30%), Positives = 34/59 (57%)
Frame = +2
Query: 350 IFRFDFFGESFSLMLVFSSFYLLISNFVYSFFTPIFSCHVGFFIKWAIYMISLSQLISY 526
+FRF FFG+ S+ L+ +F+ +IS+ + F F H I + Y++S +++ S+
Sbjct: 29 VFRFAFFGKRSSIYLI--AFFNIISD-LQQLFVACF--HSSLSIIFGRYVLSGARINSF 82
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,691,538
Number of Sequences: 27780
Number of extensions: 281811
Number of successful extensions: 877
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 843
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 875
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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