Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_pT_J04
         (662 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY094659-1|AAM11012.1|  197|Drosophila melanogaster AT23634p pro...    29   4.3  
AE014297-2249|AAF55348.1|  197|Drosophila melanogaster CG10326-P...    29   4.3  

>AY094659-1|AAM11012.1|  197|Drosophila melanogaster AT23634p
           protein.
          Length = 197

 Score = 29.5 bits (63), Expect = 4.3
 Identities = 13/55 (23%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
 Frame = -2

Query: 232 IMYDFIECV*FVFFFLTINISYLVKTLGICRLVVDY*KFNIINNFAL-GVNFNAD 71
           +++  I C+  V ++L +++  L+  LG+  ++++Y  F +++     GVN++ D
Sbjct: 43  VVFGVISCLYLVLWYLDLSLITLLSLLGVISILLNY-AFPMVSRLIFGGVNWDGD 96


>AE014297-2249|AAF55348.1|  197|Drosophila melanogaster CG10326-PA
           protein.
          Length = 197

 Score = 29.5 bits (63), Expect = 4.3
 Identities = 13/55 (23%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
 Frame = -2

Query: 232 IMYDFIECV*FVFFFLTINISYLVKTLGICRLVVDY*KFNIINNFAL-GVNFNAD 71
           +++  I C+  V ++L +++  L+  LG+  ++++Y  F +++     GVN++ D
Sbjct: 43  VVFGVISCLYLVLWYLDLSLITLLSLLGVISILLNY-AFPMVSRLIFGGVNWDGD 96


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,612,808
Number of Sequences: 53049
Number of extensions: 542028
Number of successful extensions: 843
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 833
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 843
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2848092300
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)