Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P17_pT_J02
(753 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC011725-1|AAH11725.1| 346|Homo sapiens X-ray repair complement... 127 5e-29
AF037222-1|AAC04805.1| 346|Homo sapiens XRCC3 protein. 127 5e-29
BT007417-1|AAP36085.1| 346|Homo sapiens X-ray repair complement... 124 3e-28
BC001036-1|AAH01036.1| 346|Homo sapiens X-ray repair complement... 124 3e-28
AF508041-1|AAM23015.1| 346|Homo sapiens X-ray repair complement... 124 3e-28
AF035586-1|AAC05368.1| 346|Homo sapiens X-ray repair cross-comp... 124 3e-28
Y15572-1|CAA75681.1| 328|Homo sapiens R51H3 protein. 72 2e-12
BC014422-1|AAH14422.1| 328|Homo sapiens RAD51-like 3 (S. cerevi... 72 2e-12
AY623116-1|AAT38112.1| 328|Homo sapiens RAD51-like 3 (S. cerevi... 72 2e-12
AB013341-1|BAA25914.1| 328|Homo sapiens Trad protein. 72 2e-12
BC107753-1|AAI07754.1| 376|Homo sapiens RAD51 homolog C (S. cer... 71 3e-12
AY623112-1|AAT38108.1| 376|Homo sapiens RAD51 homolog C (S. cer... 71 3e-12
AF029669-1|AAC39604.1| 376|Homo sapiens Rad51C protein. 71 3e-12
D14134-1|BAA03189.1| 339|Homo sapiens RAD51 protein. 64 4e-10
D13804-1|BAA02962.1| 339|Homo sapiens HsRad51 protein. 64 4e-10
CR536559-1|CAG38796.1| 339|Homo sapiens RAD51 protein. 64 4e-10
BT019705-1|AAV38511.1| 339|Homo sapiens RAD51 homolog (RecA hom... 64 4e-10
AY196785-1|AAN87149.1| 339|Homo sapiens RAD51 homolog (RecA hom... 64 4e-10
AF233744-1|AAF69145.1| 339|Homo sapiens RAD51 protein. 64 4e-10
AF165094-1|AAD49705.1| 339|Homo sapiens Rad51 protein. 64 4e-10
AF034956-1|AAC39719.1| 289|Homo sapiens RAD51D protein. 64 4e-10
D63882-1|BAA09932.1| 340|Homo sapiens HsLim15 protein. 64 5e-10
D64108-1|BAA10970.1| 340|Homo sapiens DMC1 homologue protein. 64 7e-10
CR456486-1|CAG30372.1| 340|Homo sapiens DMC1 protein. 64 7e-10
BC125164-1|AAI25165.1| 340|Homo sapiens DMC1 dosage suppressor ... 64 7e-10
BC125163-1|AAI25164.1| 340|Homo sapiens DMC1 dosage suppressor ... 64 7e-10
AY520538-1|AAR89915.1| 340|Homo sapiens DMC1 dosage suppressor ... 64 7e-10
AL022320-2|CAB45656.1| 340|Homo sapiens DMC1 dosage suppressor ... 64 7e-10
AK131299-1|BAD18467.1| 340|Homo sapiens protein ( Homo sapiens ... 53 1e-06
BC002723-1|AAH02723.1| 209|Homo sapiens RAD51L3 protein protein. 42 0.003
AB016225-1|BAA31749.1| 216|Homo sapiens TRAD-d3 protein. 42 0.003
AB018360-1|BAA33779.1| 95|Homo sapiens TRAD-d4 protein. 41 0.006
BC035658-1|AAH35658.1| 165|Homo sapiens DMC1 protein protein. 40 0.007
AL117459-1|CAB55937.1| 173|Homo sapiens hypothetical protein pr... 40 0.010
BT007339-1|AAP36003.1| 134|Homo sapiens RAD51 homolog C (S. cer... 39 0.017
BC101485-1|AAI01486.1| 134|Homo sapiens RAD51C protein protein. 39 0.017
BC093930-1|AAH93930.1| 134|Homo sapiens RAD51C protein protein. 39 0.017
BC000667-1|AAH00667.1| 134|Homo sapiens RAD51C protein protein. 39 0.017
AF029670-1|AAC39605.1| 135|Homo sapiens Rad51C truncated protei... 39 0.017
>BC011725-1|AAH11725.1| 346|Homo sapiens X-ray repair complementing
defective repair in Chinese hamster cells 3 protein.
Length = 346
Score = 127 bits (306), Expect = 5e-29
Identities = 86/256 (33%), Positives = 127/256 (49%), Gaps = 20/256 (7%)
Frame = -2
Query: 713 KISTGCSKIDDILGGGFRTGTINEIFGESGSGKTQLVLYTSI-------HN-LPKCSVYI 558
++S GC +D +L GG I E+ G S +GKTQL L + H L +VYI
Sbjct: 81 RLSLGCPVLDALLRGGLPLDGITELAGRSSAGKTQLALQLCLAVQFPRQHGGLEAGAVYI 140
Query: 557 CTEDLFPAKRFNQIMNSIKSRDQD----------YGKNVFVEHISEAKDLQFCIRMQLPK 408
CTED FP KR Q+M D +G +F+EH+++ L C+ ++P
Sbjct: 141 CTEDAFPHKRLQQLMAQQPRLRTDVPGELLQKLRFGSQIFIEHVADVDTLLECVNKKVPV 200
Query: 407 LLQQNIVSLIVIDSIAAPFRVE--STDYVQRAGELRELAIMLITLAQQYNIAIVCINQVT 234
LL + + L+VIDS+AAPFR E S RA L+ L ML L+ + ++CINQVT
Sbjct: 201 LLSRGMARLVVIDSVAAPFRCEFDSQASAPRARHLQSLGAMLRELSSAFQSPVLCINQVT 260
Query: 233 ASFADSDSIHPALGLAWSNMVSTRLRISKTTQSVIIDDSGVCKSDSGGQNKLFAREISVV 54
+ + + H LG W VS L I+ Q ++ + + + AR + V+
Sbjct: 261 EAMEEQGAAHGPLGF-WDERVSPALGITWANQLLVRLLADRLREEEAALG-CPARTLRVL 318
Query: 53 FAPDLANSSTLFTITS 6
AP L SS +TI++
Sbjct: 319 SAPHLPPSSCSYTISA 334
>AF037222-1|AAC04805.1| 346|Homo sapiens XRCC3 protein.
Length = 346
Score = 127 bits (306), Expect = 5e-29
Identities = 86/256 (33%), Positives = 127/256 (49%), Gaps = 20/256 (7%)
Frame = -2
Query: 713 KISTGCSKIDDILGGGFRTGTINEIFGESGSGKTQLVLYTSI-------HN-LPKCSVYI 558
++S GC +D +L GG I E+ G S +GKTQL L + H L +VYI
Sbjct: 81 RLSLGCPVLDALLRGGLPLDGITELAGRSSAGKTQLALQLCLAVQFPRQHGGLEAGAVYI 140
Query: 557 CTEDLFPAKRFNQIMNSIKSRDQD----------YGKNVFVEHISEAKDLQFCIRMQLPK 408
CTED FP KR Q+M D +G +F+EH+++ L C+ ++P
Sbjct: 141 CTEDAFPHKRLQQLMAQQPRLRTDVPGELLQKLRFGSQIFIEHVADVDTLLECVNKKVPV 200
Query: 407 LLQQNIVSLIVIDSIAAPFRVE--STDYVQRAGELRELAIMLITLAQQYNIAIVCINQVT 234
LL + + L+VIDS+AAPFR E S RA L+ L ML L+ + ++CINQVT
Sbjct: 201 LLSRGMARLVVIDSVAAPFRCEFDSQASAPRARHLQSLGAMLRELSSAFQSPVLCINQVT 260
Query: 233 ASFADSDSIHPALGLAWSNMVSTRLRISKTTQSVIIDDSGVCKSDSGGQNKLFAREISVV 54
+ + + H LG W VS L I+ Q ++ + + + AR + V+
Sbjct: 261 EAMEEQGAAHGPLGF-WDERVSPALGITWANQLLVRLLADRLREEEAALG-CPARTLRVL 318
Query: 53 FAPDLANSSTLFTITS 6
AP L SS +TI++
Sbjct: 319 SAPHLPPSSCSYTISA 334
>BT007417-1|AAP36085.1| 346|Homo sapiens X-ray repair complementing
defective repair in Chinese hamster cells 3 protein.
Length = 346
Score = 124 bits (300), Expect = 3e-28
Identities = 85/256 (33%), Positives = 126/256 (49%), Gaps = 20/256 (7%)
Frame = -2
Query: 713 KISTGCSKIDDILGGGFRTGTINEIFGESGSGKTQLVLYTSI-------HN-LPKCSVYI 558
++S GC +D +L GG I E+ G S +GKTQL L + H L +VYI
Sbjct: 81 RLSLGCPVLDALLRGGLPLDGITELAGRSSAGKTQLALQLCLAVQFPRQHGGLEAGAVYI 140
Query: 557 CTEDLFPAKRFNQIMNSIKSRDQD----------YGKNVFVEHISEAKDLQFCIRMQLPK 408
CTED FP KR Q+M D +G +F+EH+++ L C+ ++P
Sbjct: 141 CTEDAFPHKRLQQLMAQQPRLRTDVPGELLQKLRFGSQIFIEHVADVDTLLECVNKKVPV 200
Query: 407 LLQQNIVSLIVIDSIAAPFRVE--STDYVQRAGELRELAIMLITLAQQYNIAIVCINQVT 234
LL + + L+VIDS+AAPFR E S RA L+ L L L+ + ++CINQVT
Sbjct: 201 LLSRGMARLVVIDSVAAPFRCEFDSQASAPRARHLQSLGATLRELSSAFQSPVLCINQVT 260
Query: 233 ASFADSDSIHPALGLAWSNMVSTRLRISKTTQSVIIDDSGVCKSDSGGQNKLFAREISVV 54
+ + + H LG W VS L I+ Q ++ + + + AR + V+
Sbjct: 261 EAMEEQGAAHGPLGF-WDERVSPALGITWANQLLVRLLADRLREEEAALG-CPARTLRVL 318
Query: 53 FAPDLANSSTLFTITS 6
AP L SS +TI++
Sbjct: 319 SAPHLPPSSCSYTISA 334
>BC001036-1|AAH01036.1| 346|Homo sapiens X-ray repair complementing
defective repair in Chinese hamster cells 3 protein.
Length = 346
Score = 124 bits (300), Expect = 3e-28
Identities = 85/256 (33%), Positives = 126/256 (49%), Gaps = 20/256 (7%)
Frame = -2
Query: 713 KISTGCSKIDDILGGGFRTGTINEIFGESGSGKTQLVLYTSI-------HN-LPKCSVYI 558
++S GC +D +L GG I E+ G S +GKTQL L + H L +VYI
Sbjct: 81 RLSLGCPVLDALLRGGLPLDGITELAGRSSAGKTQLALQLCLAVQFPRQHGGLEAGAVYI 140
Query: 557 CTEDLFPAKRFNQIMNSIKSRDQD----------YGKNVFVEHISEAKDLQFCIRMQLPK 408
CTED FP KR Q+M D +G +F+EH+++ L C+ ++P
Sbjct: 141 CTEDAFPHKRLQQLMAQQPRLRTDVPGELLQKLRFGSQIFIEHVADVDTLLECVNKKVPV 200
Query: 407 LLQQNIVSLIVIDSIAAPFRVE--STDYVQRAGELRELAIMLITLAQQYNIAIVCINQVT 234
LL + + L+VIDS+AAPFR E S RA L+ L L L+ + ++CINQVT
Sbjct: 201 LLSRGMARLVVIDSVAAPFRCEFDSQASAPRARHLQSLGATLRELSSAFQSPVLCINQVT 260
Query: 233 ASFADSDSIHPALGLAWSNMVSTRLRISKTTQSVIIDDSGVCKSDSGGQNKLFAREISVV 54
+ + + H LG W VS L I+ Q ++ + + + AR + V+
Sbjct: 261 EAMEEQGAAHGPLGF-WDERVSPALGITWANQLLVRLLADRLREEEAALG-CPARTLRVL 318
Query: 53 FAPDLANSSTLFTITS 6
AP L SS +TI++
Sbjct: 319 SAPHLPPSSCSYTISA 334
>AF508041-1|AAM23015.1| 346|Homo sapiens X-ray repair complementing
defective repair in Chinese hamster cells 3 protein.
Length = 346
Score = 124 bits (300), Expect = 3e-28
Identities = 85/256 (33%), Positives = 126/256 (49%), Gaps = 20/256 (7%)
Frame = -2
Query: 713 KISTGCSKIDDILGGGFRTGTINEIFGESGSGKTQLVLYTSI-------HN-LPKCSVYI 558
++S GC +D +L GG I E+ G S +GKTQL L + H L +VYI
Sbjct: 81 RLSLGCPVLDALLRGGLPLDGITELAGRSSAGKTQLALQLCLAVQFPRQHGGLEAGAVYI 140
Query: 557 CTEDLFPAKRFNQIMNSIKSRDQD----------YGKNVFVEHISEAKDLQFCIRMQLPK 408
CTED FP KR Q+M D +G +F+EH+++ L C+ ++P
Sbjct: 141 CTEDAFPHKRLQQLMAQQPRLRTDVPGELLQKLRFGSQIFIEHVADVDTLLECVNKKVPV 200
Query: 407 LLQQNIVSLIVIDSIAAPFRVE--STDYVQRAGELRELAIMLITLAQQYNIAIVCINQVT 234
LL + + L+VIDS+AAPFR E S RA L+ L L L+ + ++CINQVT
Sbjct: 201 LLSRGMARLVVIDSVAAPFRCEFDSQASAPRARHLQSLGATLRELSSAFQSPVLCINQVT 260
Query: 233 ASFADSDSIHPALGLAWSNMVSTRLRISKTTQSVIIDDSGVCKSDSGGQNKLFAREISVV 54
+ + + H LG W VS L I+ Q ++ + + + AR + V+
Sbjct: 261 EAMEEQGAAHGPLGF-WDERVSPALGITWANQLLVRLLADRLREEEAALG-CPARTLRVL 318
Query: 53 FAPDLANSSTLFTITS 6
AP L SS +TI++
Sbjct: 319 SAPHLPPSSCSYTISA 334
>AF035586-1|AAC05368.1| 346|Homo sapiens X-ray repair
cross-complementing protein 3 protein.
Length = 346
Score = 124 bits (300), Expect = 3e-28
Identities = 85/256 (33%), Positives = 126/256 (49%), Gaps = 20/256 (7%)
Frame = -2
Query: 713 KISTGCSKIDDILGGGFRTGTINEIFGESGSGKTQLVLYTSI-------HN-LPKCSVYI 558
++S GC +D +L GG I E+ G S +GKTQL L + H L +VYI
Sbjct: 81 RLSLGCPVLDALLRGGLPLDGITELAGRSSAGKTQLALQLCLAVQFPRQHGGLEAGAVYI 140
Query: 557 CTEDLFPAKRFNQIMNSIKSRDQD----------YGKNVFVEHISEAKDLQFCIRMQLPK 408
CTED FP KR Q+M D +G +F+EH+++ L C+ ++P
Sbjct: 141 CTEDAFPHKRLQQLMAQQPRLRTDVPGELLQKLRFGSQIFIEHVADVDTLLECVNKKVPV 200
Query: 407 LLQQNIVSLIVIDSIAAPFRVE--STDYVQRAGELRELAIMLITLAQQYNIAIVCINQVT 234
LL + + L+VIDS+AAPFR E S RA L+ L L L+ + ++CINQVT
Sbjct: 201 LLSRGMARLVVIDSVAAPFRCEFDSQASAPRARHLQSLGATLRELSSAFQSPVLCINQVT 260
Query: 233 ASFADSDSIHPALGLAWSNMVSTRLRISKTTQSVIIDDSGVCKSDSGGQNKLFAREISVV 54
+ + + H LG W VS L I+ Q ++ + + + AR + V+
Sbjct: 261 EAMEEQGAAHGPLGF-WDERVSPALGITWANQLLVRLLADRLREEEAALG-CPARTLRVL 318
Query: 53 FAPDLANSSTLFTITS 6
AP L SS +TI++
Sbjct: 319 SAPHLPPSSCSYTISA 334
>Y15572-1|CAA75681.1| 328|Homo sapiens R51H3 protein.
Length = 328
Score = 72.1 bits (169), Expect = 2e-12
Identities = 59/205 (28%), Positives = 97/205 (47%), Gaps = 13/205 (6%)
Frame = -2
Query: 734 ELLVKNCKISTGCSKIDDILGGGFRTGTINEIFGESGSGKTQLVLYTS---IHNLPKCSV 564
EL +STG +D +L G TG + EI G GSGKTQ+ L + H L + +
Sbjct: 74 ELKTSTAILSTGIGSLDKLLDAGLYTGEVTEIVGGPGSGKTQVCLCMAANVAHGLQQNVL 133
Query: 563 YICTEDLFPAKRFNQIMNSIKSRDQDYGKNVFVEHISEAKDL--QFCIRMQLPKLLQQNI 390
Y+ + A R Q++ + +++ + + + A D+ + +L + Q +
Sbjct: 134 YVDSNGGLTASRLLQLLQAKTQDEEEQAEALRRIQVVHAFDIFQMLDVLQELRGTVAQQV 193
Query: 389 ------VSLIVIDSIAAPFRVESTDYVQRAG--ELRELAIMLITLAQQYNIAIVCINQVT 234
V ++V+DS+ A QR G + +LA L TLA+ +A+V N +T
Sbjct: 194 TGSSGTVKVVVVDSVTAVVS-PLLGGQQREGLALMMQLARELKTLARDLGMAVVVTNHIT 252
Query: 233 ASFADSDSIHPALGLAWSNMVSTRL 159
DS + PALG +WS + STR+
Sbjct: 253 RD-RDSGRLKPALGRSWSFVPSTRI 276
>BC014422-1|AAH14422.1| 328|Homo sapiens RAD51-like 3 (S.
cerevisiae) protein.
Length = 328
Score = 72.1 bits (169), Expect = 2e-12
Identities = 59/205 (28%), Positives = 97/205 (47%), Gaps = 13/205 (6%)
Frame = -2
Query: 734 ELLVKNCKISTGCSKIDDILGGGFRTGTINEIFGESGSGKTQLVLYTS---IHNLPKCSV 564
EL +STG +D +L G TG + EI G GSGKTQ+ L + H L + +
Sbjct: 74 ELKTSTAILSTGIGSLDKLLDAGLYTGEVTEIVGGPGSGKTQVCLCMAANVAHGLQQNVL 133
Query: 563 YICTEDLFPAKRFNQIMNSIKSRDQDYGKNVFVEHISEAKDL--QFCIRMQLPKLLQQNI 390
Y+ + A R Q++ + +++ + + + A D+ + +L + Q +
Sbjct: 134 YVDSNGGLTASRLLQLLQAKTQDEEEQAEALRRIQVVHAFDIFQMLDVLQELRGTVAQQV 193
Query: 389 ------VSLIVIDSIAAPFRVESTDYVQRAG--ELRELAIMLITLAQQYNIAIVCINQVT 234
V ++V+DS+ A QR G + +LA L TLA+ +A+V N +T
Sbjct: 194 TGSSGTVKVVVVDSVTAVVS-PLLGGQQREGLALMMQLARELKTLARDLGMAVVVTNHIT 252
Query: 233 ASFADSDSIHPALGLAWSNMVSTRL 159
DS + PALG +WS + STR+
Sbjct: 253 RD-RDSGRLKPALGRSWSFVPSTRI 276
>AY623116-1|AAT38112.1| 328|Homo sapiens RAD51-like 3 (S.
cerevisiae) protein.
Length = 328
Score = 72.1 bits (169), Expect = 2e-12
Identities = 59/205 (28%), Positives = 97/205 (47%), Gaps = 13/205 (6%)
Frame = -2
Query: 734 ELLVKNCKISTGCSKIDDILGGGFRTGTINEIFGESGSGKTQLVLYTS---IHNLPKCSV 564
EL +STG +D +L G TG + EI G GSGKTQ+ L + H L + +
Sbjct: 74 ELKTSTAILSTGIGSLDKLLDAGLYTGEVTEIVGGPGSGKTQVCLCMAANVAHGLQQNVL 133
Query: 563 YICTEDLFPAKRFNQIMNSIKSRDQDYGKNVFVEHISEAKDL--QFCIRMQLPKLLQQNI 390
Y+ + A R Q++ + +++ + + + A D+ + +L + Q +
Sbjct: 134 YVDSNGGLTASRLLQLLQAKTQDEEEQAEALRRIQVVHAFDIFQMLDVLQELRGTVAQQV 193
Query: 389 ------VSLIVIDSIAAPFRVESTDYVQRAG--ELRELAIMLITLAQQYNIAIVCINQVT 234
V ++V+DS+ A QR G + +LA L TLA+ +A+V N +T
Sbjct: 194 TGSSGTVKVVVVDSVTAVVS-PLLGGQQREGLALMMQLARELKTLARDLGMAVVVTNHIT 252
Query: 233 ASFADSDSIHPALGLAWSNMVSTRL 159
DS + PALG +WS + STR+
Sbjct: 253 RD-RDSGRLKPALGRSWSFVPSTRI 276
>AB013341-1|BAA25914.1| 328|Homo sapiens Trad protein.
Length = 328
Score = 72.1 bits (169), Expect = 2e-12
Identities = 59/205 (28%), Positives = 97/205 (47%), Gaps = 13/205 (6%)
Frame = -2
Query: 734 ELLVKNCKISTGCSKIDDILGGGFRTGTINEIFGESGSGKTQLVLYTS---IHNLPKCSV 564
EL +STG +D +L G TG + EI G GSGKTQ+ L + H L + +
Sbjct: 74 ELKTSTAILSTGIGSLDKLLDAGLYTGEVTEIVGGPGSGKTQVCLCMAANVAHGLQQNVL 133
Query: 563 YICTEDLFPAKRFNQIMNSIKSRDQDYGKNVFVEHISEAKDL--QFCIRMQLPKLLQQNI 390
Y+ + A R Q++ + +++ + + + A D+ + +L + Q +
Sbjct: 134 YVDSNGGLTASRLLQLLQAKTQDEEEQAEALQRIQVVHAFDIFQMLDVLQELRGTVAQQV 193
Query: 389 ------VSLIVIDSIAAPFRVESTDYVQRAG--ELRELAIMLITLAQQYNIAIVCINQVT 234
V ++V+DS+ A QR G + +LA L TLA+ +A+V N +T
Sbjct: 194 TGSSGTVKVVVVDSVTAVVS-PLLGGQQREGLALMMQLARELKTLARDLGMAVVVTNHIT 252
Query: 233 ASFADSDSIHPALGLAWSNMVSTRL 159
DS + PALG +WS + STR+
Sbjct: 253 RD-RDSGRLKPALGRSWSFVPSTRI 276
>BC107753-1|AAI07754.1| 376|Homo sapiens RAD51 homolog C (S.
cerevisiae) protein.
Length = 376
Score = 71.3 bits (167), Expect = 3e-12
Identities = 63/214 (29%), Positives = 100/214 (46%), Gaps = 30/214 (14%)
Frame = -2
Query: 710 ISTGCSKIDDILGGGFRTGTINEIFGESGSGKTQLVLYTSIH-NLPKC-------SVYIC 555
I T CS +DDILGGG EI G G GKTQL + ++ +P+C +V+I
Sbjct: 100 IITFCSALDDILGGGVPLMKTTEICGAPGVGKTQLCMQLAVDVQIPECFGGVAGEAVFID 159
Query: 554 TEDLFPAKRFNQIMNSI---------KSRDQDYGKNV-------FVEHIS--EAKDLQFC 429
TE F R + + K + +++ K + + HI +D
Sbjct: 160 TEGSFMVDRVVDLATACIQHLQLIAEKHKGEEHRKALEDFTLDNILSHIYYFRCRDYTEL 219
Query: 428 IRMQ--LPKLLQQNI-VSLIVIDSIAAPFRVESTDYVQRAGELRELAIMLITLAQQYNIA 258
+ LP L ++ V L+++D IA PFR + D R L LA +I+LA + +A
Sbjct: 220 LAQVYLLPDFLSEHSKVRLVIVDGIAFPFRHDLDDLSLRTRLLNGLAQQMISLANNHRLA 279
Query: 257 IVCINQVTASFADSDS-IHPALGLAWSNMVSTRL 159
++ NQ+T + + + PALG +W + + RL
Sbjct: 280 VILTNQMTTKIDRNQALLVPALGESWGHAATIRL 313
>AY623112-1|AAT38108.1| 376|Homo sapiens RAD51 homolog C (S.
cerevisiae) protein.
Length = 376
Score = 71.3 bits (167), Expect = 3e-12
Identities = 63/214 (29%), Positives = 100/214 (46%), Gaps = 30/214 (14%)
Frame = -2
Query: 710 ISTGCSKIDDILGGGFRTGTINEIFGESGSGKTQLVLYTSIH-NLPKC-------SVYIC 555
I T CS +DDILGGG EI G G GKTQL + ++ +P+C +V+I
Sbjct: 100 IITFCSALDDILGGGVPLMKTTEICGAPGVGKTQLCMQLAVDVQIPECFGGVAGEAVFID 159
Query: 554 TEDLFPAKRFNQIMNSI---------KSRDQDYGKNV-------FVEHIS--EAKDLQFC 429
TE F R + + K + +++ K + + HI +D
Sbjct: 160 TEGSFMVDRVVDLATACIQHLQLIAEKHKGEEHRKALEDFTLDNILSHIYYFRCRDYTEL 219
Query: 428 IRMQ--LPKLLQQNI-VSLIVIDSIAAPFRVESTDYVQRAGELRELAIMLITLAQQYNIA 258
+ LP L ++ V L+++D IA PFR + D R L LA +I+LA + +A
Sbjct: 220 LAQVYLLPDFLSEHSKVRLVIVDGIAFPFRHDLDDLSLRTRLLNGLAQQMISLANNHRLA 279
Query: 257 IVCINQVTASFADSDS-IHPALGLAWSNMVSTRL 159
++ NQ+T + + + PALG +W + + RL
Sbjct: 280 VILTNQMTTKIDRNQALLVPALGESWGHAATIRL 313
>AF029669-1|AAC39604.1| 376|Homo sapiens Rad51C protein.
Length = 376
Score = 71.3 bits (167), Expect = 3e-12
Identities = 63/214 (29%), Positives = 100/214 (46%), Gaps = 30/214 (14%)
Frame = -2
Query: 710 ISTGCSKIDDILGGGFRTGTINEIFGESGSGKTQLVLYTSIH-NLPKC-------SVYIC 555
I T CS +DDILGGG EI G G GKTQL + ++ +P+C +V+I
Sbjct: 100 IITFCSALDDILGGGVPLMKTTEICGAPGVGKTQLCMQLAVDVQIPECFGGVAGEAVFID 159
Query: 554 TEDLFPAKRFNQIMNSI---------KSRDQDYGKNV-------FVEHIS--EAKDLQFC 429
TE F R + + K + +++ K + + HI +D
Sbjct: 160 TEGSFMVDRVVDLATACIQHLQLIAEKHKGEEHRKALEDFTLDNILSHIYYFRCRDYTEL 219
Query: 428 IRMQ--LPKLLQQNI-VSLIVIDSIAAPFRVESTDYVQRAGELRELAIMLITLAQQYNIA 258
+ LP L ++ V L+++D IA PFR + D R L LA +I+LA + +A
Sbjct: 220 LAQVYLLPDFLSEHSKVRLVIVDGIAFPFRHDLDDLSLRTRLLNGLAQQMISLANNHRLA 279
Query: 257 IVCINQVTASFADSDS-IHPALGLAWSNMVSTRL 159
++ NQ+T + + + PALG +W + + RL
Sbjct: 280 VILTNQMTTKIDRNQALLVPALGESWGHAATIRL 313
>D14134-1|BAA03189.1| 339|Homo sapiens RAD51 protein.
Length = 339
Score = 64.5 bits (150), Expect = 4e-10
Identities = 55/176 (31%), Positives = 88/176 (50%), Gaps = 15/176 (8%)
Frame = -2
Query: 713 KISTGCSKIDDILGGGFRTGTINEIFGESGSGKTQLVLYTSIH-NLP-------KCSVYI 558
+I+TG ++D +L GG TG+I E+FGE +GKTQ+ ++ LP ++YI
Sbjct: 101 QITTGSKELDKLLQGGIETGSITEMFGEFRTGKTQICHTLAVTCQLPIDRGGGEGKAMYI 160
Query: 557 CTEDLFPAKRFNQIMNSIKSRDQDYGKNVFVEHISEAKDLQFCIRMQLPKLLQQNIVSLI 378
TE F +R + D NV D Q + Q ++ ++ +L+
Sbjct: 161 DTEGTFRPERLLAVAERYGLSGSDVLDNVAYARAFNT-DHQTQLLYQASAMMVESRYALL 219
Query: 377 VIDSIAAPFRVESTDYVQRAGEL--RELAI-----MLITLAQQYNIAIVCINQVTA 231
++DS A +R TDY R GEL R++ + ML+ LA ++ +A+V NQV A
Sbjct: 220 IVDSATALYR---TDYSGR-GELSARQMHLARFLRMLLRLADEFGVAVVITNQVVA 271
>D13804-1|BAA02962.1| 339|Homo sapiens HsRad51 protein.
Length = 339
Score = 64.5 bits (150), Expect = 4e-10
Identities = 55/176 (31%), Positives = 88/176 (50%), Gaps = 15/176 (8%)
Frame = -2
Query: 713 KISTGCSKIDDILGGGFRTGTINEIFGESGSGKTQLVLYTSIH-NLP-------KCSVYI 558
+I+TG ++D +L GG TG+I E+FGE +GKTQ+ ++ LP ++YI
Sbjct: 101 QITTGSKELDKLLQGGIETGSITEMFGEFRTGKTQICHTLAVTCQLPIDRGGGEGKAMYI 160
Query: 557 CTEDLFPAKRFNQIMNSIKSRDQDYGKNVFVEHISEAKDLQFCIRMQLPKLLQQNIVSLI 378
TE F +R + D NV D Q + Q ++ ++ +L+
Sbjct: 161 DTEGTFRPERLLAVAERYGLSGSDVLDNVAYARAFNT-DHQTQLLYQASAMMVESRYALL 219
Query: 377 VIDSIAAPFRVESTDYVQRAGEL--RELAI-----MLITLAQQYNIAIVCINQVTA 231
++DS A +R TDY R GEL R++ + ML+ LA ++ +A+V NQV A
Sbjct: 220 IVDSATALYR---TDYSGR-GELSARQMHLARFLRMLLRLADEFGVAVVITNQVVA 271
>CR536559-1|CAG38796.1| 339|Homo sapiens RAD51 protein.
Length = 339
Score = 64.5 bits (150), Expect = 4e-10
Identities = 55/176 (31%), Positives = 88/176 (50%), Gaps = 15/176 (8%)
Frame = -2
Query: 713 KISTGCSKIDDILGGGFRTGTINEIFGESGSGKTQLVLYTSIH-NLP-------KCSVYI 558
+I+TG ++D +L GG TG+I E+FGE +GKTQ+ ++ LP ++YI
Sbjct: 101 QITTGSKELDKLLQGGIETGSITEMFGEFRTGKTQICHTLAVTCQLPIDRGGGEGKAMYI 160
Query: 557 CTEDLFPAKRFNQIMNSIKSRDQDYGKNVFVEHISEAKDLQFCIRMQLPKLLQQNIVSLI 378
TE F +R + D NV D Q + Q ++ ++ +L+
Sbjct: 161 DTEGTFRPERLLAVAERYGLSGSDVLDNVAYARAFNT-DHQTQLLYQASAMMVESRYALL 219
Query: 377 VIDSIAAPFRVESTDYVQRAGEL--RELAI-----MLITLAQQYNIAIVCINQVTA 231
++DS A +R TDY R GEL R++ + ML+ LA ++ +A+V NQV A
Sbjct: 220 IVDSATALYR---TDYSGR-GELSARQMHLARFLRMLLRLADEFGVAVVITNQVVA 271
>BT019705-1|AAV38511.1| 339|Homo sapiens RAD51 homolog (RecA
homolog, E. coli) (S. cerevisiae) protein.
Length = 339
Score = 64.5 bits (150), Expect = 4e-10
Identities = 55/176 (31%), Positives = 88/176 (50%), Gaps = 15/176 (8%)
Frame = -2
Query: 713 KISTGCSKIDDILGGGFRTGTINEIFGESGSGKTQLVLYTSIH-NLP-------KCSVYI 558
+I+TG ++D +L GG TG+I E+FGE +GKTQ+ ++ LP ++YI
Sbjct: 101 QITTGSKELDKLLQGGIETGSITEMFGEFRTGKTQICHTLAVTCQLPIDRGEGEGKAMYI 160
Query: 557 CTEDLFPAKRFNQIMNSIKSRDQDYGKNVFVEHISEAKDLQFCIRMQLPKLLQQNIVSLI 378
TE F +R + D NV D Q + Q ++ ++ +L+
Sbjct: 161 DTEGTFRPERLLAVAERYGLSGSDVLDNVAYARAFNT-DHQTQLLYQASAMMVESRYALL 219
Query: 377 VIDSIAAPFRVESTDYVQRAGEL--RELAI-----MLITLAQQYNIAIVCINQVTA 231
++DS A +R TDY R GEL R++ + ML+ LA ++ +A+V NQV A
Sbjct: 220 IVDSATALYR---TDYSGR-GELSARQMHLARFLRMLLRLADEFGVAVVITNQVVA 271
>AY196785-1|AAN87149.1| 339|Homo sapiens RAD51 homolog (RecA
homolog, E. coli) (S. cerevisiae) protein.
Length = 339
Score = 64.5 bits (150), Expect = 4e-10
Identities = 55/176 (31%), Positives = 88/176 (50%), Gaps = 15/176 (8%)
Frame = -2
Query: 713 KISTGCSKIDDILGGGFRTGTINEIFGESGSGKTQLVLYTSIH-NLP-------KCSVYI 558
+I+TG ++D +L GG TG+I E+FGE +GKTQ+ ++ LP ++YI
Sbjct: 101 QITTGSKELDKLLQGGIETGSITEMFGEFRTGKTQICHTLAVTCQLPIDRGGGEGKAMYI 160
Query: 557 CTEDLFPAKRFNQIMNSIKSRDQDYGKNVFVEHISEAKDLQFCIRMQLPKLLQQNIVSLI 378
TE F +R + D NV D Q + Q ++ ++ +L+
Sbjct: 161 DTEGTFRPERLLAVAERYGLSGSDVLDNVAYARAFNT-DHQTQLLYQASAMMVESRYALL 219
Query: 377 VIDSIAAPFRVESTDYVQRAGEL--RELAI-----MLITLAQQYNIAIVCINQVTA 231
++DS A +R TDY R GEL R++ + ML+ LA ++ +A+V NQV A
Sbjct: 220 IVDSATALYR---TDYSGR-GELSARQMHLARFLRMLLRLADEFGVAVVITNQVVA 271
>AF233744-1|AAF69145.1| 339|Homo sapiens RAD51 protein.
Length = 339
Score = 64.5 bits (150), Expect = 4e-10
Identities = 55/176 (31%), Positives = 88/176 (50%), Gaps = 15/176 (8%)
Frame = -2
Query: 713 KISTGCSKIDDILGGGFRTGTINEIFGESGSGKTQLVLYTSIH-NLP-------KCSVYI 558
+I+TG ++D +L GG TG+I E+FGE +GKTQ+ ++ LP ++YI
Sbjct: 101 QITTGSKELDKLLQGGIETGSITEMFGEFRTGKTQICHTLAVTCQLPIDRGGGEGKAMYI 160
Query: 557 CTEDLFPAKRFNQIMNSIKSRDQDYGKNVFVEHISEAKDLQFCIRMQLPKLLQQNIVSLI 378
TE F +R + D NV D Q + Q ++ ++ +L+
Sbjct: 161 DTEGTFRPERLLAVAERYGLSGSDVLDNVAYARAFNT-DHQTQLLYQASAMMVESRYALL 219
Query: 377 VIDSIAAPFRVESTDYVQRAGEL--RELAI-----MLITLAQQYNIAIVCINQVTA 231
++DS A +R TDY R GEL R++ + ML+ LA ++ +A+V NQV A
Sbjct: 220 IVDSATALYR---TDYSGR-GELSARQMHLARFLRMLLRLADEFGVAVVITNQVVA 271
>AF165094-1|AAD49705.1| 339|Homo sapiens Rad51 protein.
Length = 339
Score = 64.5 bits (150), Expect = 4e-10
Identities = 55/176 (31%), Positives = 88/176 (50%), Gaps = 15/176 (8%)
Frame = -2
Query: 713 KISTGCSKIDDILGGGFRTGTINEIFGESGSGKTQLVLYTSIH-NLP-------KCSVYI 558
+I+TG ++D +L GG TG+I E+FGE +GKTQ+ ++ LP ++YI
Sbjct: 101 QITTGSKELDKLLQGGIETGSITEMFGEFRTGKTQICHTLAVTCQLPIDRGGGEGKAMYI 160
Query: 557 CTEDLFPAKRFNQIMNSIKSRDQDYGKNVFVEHISEAKDLQFCIRMQLPKLLQQNIVSLI 378
TE F +R + D NV D Q + Q ++ ++ +L+
Sbjct: 161 DTEGTFRPERLLAVAERYGLSGSDVLDNVAYARAFNT-DHQTQLLYQASAMMVESRYALL 219
Query: 377 VIDSIAAPFRVESTDYVQRAGEL--RELAI-----MLITLAQQYNIAIVCINQVTA 231
++DS A +R TDY R GEL R++ + ML+ LA ++ +A+V NQV A
Sbjct: 220 IVDSATALYR---TDYSGR-GELSARQMHLARFLRMLLRLADEFGVAVVITNQVVA 271
>AF034956-1|AAC39719.1| 289|Homo sapiens RAD51D protein.
Length = 289
Score = 64.5 bits (150), Expect = 4e-10
Identities = 57/205 (27%), Positives = 97/205 (47%), Gaps = 13/205 (6%)
Frame = -2
Query: 734 ELLVKNCKISTGCSKIDDILGGGFRTGTINEIFGESGSGKTQLVLYTS---IHNLPKCSV 564
E + + C +S +D +L G TG + EI G GSGKTQ+ L + H L + +
Sbjct: 37 EEVAQKCGLSY--KXLDKLLDAGLYTGEVTEIVGGPGSGKTQVCLCMAANVAHGLQQNVL 94
Query: 563 YICTEDLFPAKRFNQIMNSIKSRDQDYGKNVFVEHISEAKDL--QFCIRMQLPKLLQQNI 390
Y+ + A R Q++ + +++ + + + A D+ + +L + Q +
Sbjct: 95 YVDSNGGLTASRLLQLLQAKTQDEEEQAEALRRIQVVHAFDIFQMLDVLQELRGTVAQQV 154
Query: 389 ------VSLIVIDSIAAPFRVESTDYVQRAG--ELRELAIMLITLAQQYNIAIVCINQVT 234
V ++V+DS+ A QR G + +LA L TLA+ +A+V N +T
Sbjct: 155 TGSSGTVKVVVVDSVTAVVS-PLLGGQQREGLALMMQLARELKTLARDLGMAVVVTNHIT 213
Query: 233 ASFADSDSIHPALGLAWSNMVSTRL 159
DS + PALG +WS + STR+
Sbjct: 214 RD-RDSGRLKPALGRSWSFVPSTRI 237
>D63882-1|BAA09932.1| 340|Homo sapiens HsLim15 protein.
Length = 340
Score = 64.1 bits (149), Expect = 5e-10
Identities = 49/172 (28%), Positives = 80/172 (46%), Gaps = 12/172 (6%)
Frame = -2
Query: 710 ISTGCSKIDDILGGGFRTGTINEIFGESGSGKTQLVLYTSI-HNLPKCS-------VYIC 555
I+TG + D +LGGG + I E FGE +GKTQL + LP ++I
Sbjct: 101 ITTGSQEFDKLLGGGIESMAITEAFGEFRTGKTQLSHTLCVTAQLPGAGGYPGGKIIFID 160
Query: 554 TEDLFPAKRFNQIMNSIKSRDQDYGKNVFVEHISEAKDLQFCIRMQLPKLLQQ-NIVSLI 378
TE+ F R I + NV ++ + K ++ I L+
Sbjct: 161 TENTFRPDRLRDIADRFNVDHDPVLDNVLYARAYTSEHQMELLDYVAAKFHEEAGIFKLL 220
Query: 377 VIDSIAAPFRVEST---DYVQRAGELRELAIMLITLAQQYNIAIVCINQVTA 231
+IDSI A FRV+ + + +R +L ++ L ++++YN+A+ NQ+TA
Sbjct: 221 IIDSIMALFRVDFSGRGELAERQQKLAQMLSRLQKISEEYNVAVFVTNQMTA 272
>D64108-1|BAA10970.1| 340|Homo sapiens DMC1 homologue protein.
Length = 340
Score = 63.7 bits (148), Expect = 7e-10
Identities = 49/172 (28%), Positives = 80/172 (46%), Gaps = 12/172 (6%)
Frame = -2
Query: 710 ISTGCSKIDDILGGGFRTGTINEIFGESGSGKTQLVLYTSI-HNLPKCS-------VYIC 555
I+TG + D +LGGG + I E FGE +GKTQL + LP ++I
Sbjct: 101 ITTGSQEFDKLLGGGIESMAITEAFGEFRTGKTQLSHTLCVTAQLPGAGGYPGGKIIFID 160
Query: 554 TEDLFPAKRFNQIMNSIKSRDQDYGKNVFVEHISEAKDLQFCIRMQLPKLLQQ-NIVSLI 378
TE+ F R I + NV ++ + K ++ I L+
Sbjct: 161 TENTFRPDRLRDIADRFNVDHDAVLDNVLYARAYTSEHQMELLDYVAAKFHEEAGIFKLL 220
Query: 377 VIDSIAAPFRVEST---DYVQRAGELRELAIMLITLAQQYNIAIVCINQVTA 231
+IDSI A FRV+ + + +R +L ++ L ++++YN+A+ NQ+TA
Sbjct: 221 IIDSIMALFRVDFSGRGELAERQQKLAQMLSRLQKISEEYNVAVFVTNQMTA 272
>CR456486-1|CAG30372.1| 340|Homo sapiens DMC1 protein.
Length = 340
Score = 63.7 bits (148), Expect = 7e-10
Identities = 49/172 (28%), Positives = 80/172 (46%), Gaps = 12/172 (6%)
Frame = -2
Query: 710 ISTGCSKIDDILGGGFRTGTINEIFGESGSGKTQLVLYTSI-HNLPKCS-------VYIC 555
I+TG + D +LGGG + I E FGE +GKTQL + LP ++I
Sbjct: 101 ITTGSQEFDKLLGGGIESMAITEAFGEFRTGKTQLSHTLCVTAQLPGAGGYPGGKIIFID 160
Query: 554 TEDLFPAKRFNQIMNSIKSRDQDYGKNVFVEHISEAKDLQFCIRMQLPKLLQQ-NIVSLI 378
TE+ F R I + NV ++ + K ++ I L+
Sbjct: 161 TENTFRPDRLRDIADRFNVDHDAVLDNVLYARAYTSEHQMELLDYVAAKFHEEAGIFKLL 220
Query: 377 VIDSIAAPFRVEST---DYVQRAGELRELAIMLITLAQQYNIAIVCINQVTA 231
+IDSI A FRV+ + + +R +L ++ L ++++YN+A+ NQ+TA
Sbjct: 221 IIDSIMALFRVDFSGRGELAERQQKLAQMLSRLQKISEEYNVAVFVTNQMTA 272
>BC125164-1|AAI25165.1| 340|Homo sapiens DMC1 dosage suppressor of
mck1 homolog, meiosis-specific homologous recombinati
protein.
Length = 340
Score = 63.7 bits (148), Expect = 7e-10
Identities = 49/172 (28%), Positives = 80/172 (46%), Gaps = 12/172 (6%)
Frame = -2
Query: 710 ISTGCSKIDDILGGGFRTGTINEIFGESGSGKTQLVLYTSI-HNLPKCS-------VYIC 555
I+TG + D +LGGG + I E FGE +GKTQL + LP ++I
Sbjct: 101 ITTGSQEFDKLLGGGIESMAITEAFGEFRTGKTQLSHTLCVTAQLPGAGGYPGGKIIFID 160
Query: 554 TEDLFPAKRFNQIMNSIKSRDQDYGKNVFVEHISEAKDLQFCIRMQLPKLLQQ-NIVSLI 378
TE+ F R I + NV ++ + K ++ I L+
Sbjct: 161 TENTFRPDRLRDIADRFNVDHDAVLDNVLYARAYTSEHQMELLDYVAAKFHEEAGIFKLL 220
Query: 377 VIDSIAAPFRVEST---DYVQRAGELRELAIMLITLAQQYNIAIVCINQVTA 231
+IDSI A FRV+ + + +R +L ++ L ++++YN+A+ NQ+TA
Sbjct: 221 IIDSIMALFRVDFSGRGELAERQQKLAQMLSRLQKISEEYNVAVFVTNQMTA 272
>BC125163-1|AAI25164.1| 340|Homo sapiens DMC1 dosage suppressor of
mck1 homolog, meiosis-specific homologous recombinati
protein.
Length = 340
Score = 63.7 bits (148), Expect = 7e-10
Identities = 49/172 (28%), Positives = 80/172 (46%), Gaps = 12/172 (6%)
Frame = -2
Query: 710 ISTGCSKIDDILGGGFRTGTINEIFGESGSGKTQLVLYTSI-HNLPKCS-------VYIC 555
I+TG + D +LGGG + I E FGE +GKTQL + LP ++I
Sbjct: 101 ITTGSQEFDKLLGGGIESMAITEAFGEFRTGKTQLSHTLCVTAQLPGAGGYPGGKIIFID 160
Query: 554 TEDLFPAKRFNQIMNSIKSRDQDYGKNVFVEHISEAKDLQFCIRMQLPKLLQQ-NIVSLI 378
TE+ F R I + NV ++ + K ++ I L+
Sbjct: 161 TENTFRPDRLRDIADRFNVDHDAVLDNVLYARAYTSEHQMELLDYVAAKFHEEAGIFKLL 220
Query: 377 VIDSIAAPFRVEST---DYVQRAGELRELAIMLITLAQQYNIAIVCINQVTA 231
+IDSI A FRV+ + + +R +L ++ L ++++YN+A+ NQ+TA
Sbjct: 221 IIDSIMALFRVDFSGRGELAERQQKLAQMLSRLQKISEEYNVAVFVTNQMTA 272
>AY520538-1|AAR89915.1| 340|Homo sapiens DMC1 dosage suppressor of
mck1 homolog, meiosis-specific homologous recombinati
protein.
Length = 340
Score = 63.7 bits (148), Expect = 7e-10
Identities = 49/172 (28%), Positives = 80/172 (46%), Gaps = 12/172 (6%)
Frame = -2
Query: 710 ISTGCSKIDDILGGGFRTGTINEIFGESGSGKTQLVLYTSI-HNLPKCS-------VYIC 555
I+TG + D +LGGG + I E FGE +GKTQL + LP ++I
Sbjct: 101 ITTGSQEFDKLLGGGIESMAITEAFGEFRTGKTQLSHTLCVTAQLPGAGGYPGGKIIFID 160
Query: 554 TEDLFPAKRFNQIMNSIKSRDQDYGKNVFVEHISEAKDLQFCIRMQLPKLLQQ-NIVSLI 378
TE+ F R I + NV ++ + K ++ I L+
Sbjct: 161 TENTFRPDRLRDIADRFNVDHDAVLDNVLYARAYTSEHQMELLDYVAAKFHEEAGIFKLL 220
Query: 377 VIDSIAAPFRVEST---DYVQRAGELRELAIMLITLAQQYNIAIVCINQVTA 231
+IDSI A FRV+ + + +R +L ++ L ++++YN+A+ NQ+TA
Sbjct: 221 IIDSIMALFRVDFSGRGELAERQQKLAQMLSRLQKISEEYNVAVFVTNQMTA 272
>AL022320-2|CAB45656.1| 340|Homo sapiens DMC1 dosage suppressor of
mck1 homolog, meiosis-specific homologous recombinati
protein.
Length = 340
Score = 63.7 bits (148), Expect = 7e-10
Identities = 49/172 (28%), Positives = 80/172 (46%), Gaps = 12/172 (6%)
Frame = -2
Query: 710 ISTGCSKIDDILGGGFRTGTINEIFGESGSGKTQLVLYTSI-HNLPKCS-------VYIC 555
I+TG + D +LGGG + I E FGE +GKTQL + LP ++I
Sbjct: 101 ITTGSQEFDKLLGGGIESMAITEAFGEFRTGKTQLSHTLCVTAQLPGAGGYPGGKIIFID 160
Query: 554 TEDLFPAKRFNQIMNSIKSRDQDYGKNVFVEHISEAKDLQFCIRMQLPKLLQQ-NIVSLI 378
TE+ F R I + NV ++ + K ++ I L+
Sbjct: 161 TENTFRPDRLRDIADRFNVDHDAVLDNVLYARAYTSEHQMELLDYVAAKFHEEAGIFKLL 220
Query: 377 VIDSIAAPFRVEST---DYVQRAGELRELAIMLITLAQQYNIAIVCINQVTA 231
+IDSI A FRV+ + + +R +L ++ L ++++YN+A+ NQ+TA
Sbjct: 221 IIDSIMALFRVDFSGRGELAERQQKLAQMLSRLQKISEEYNVAVFVTNQMTA 272
>AK131299-1|BAD18467.1| 340|Homo sapiens protein ( Homo sapiens
cDNA FLJ16262 fis, clone IMR322008651, highly similar
to DNA REPAIR PROTEIN RAD51. ).
Length = 340
Score = 53.2 bits (122), Expect = 1e-06
Identities = 50/162 (30%), Positives = 78/162 (48%), Gaps = 15/162 (9%)
Frame = -2
Query: 671 GGFRTGTINEIFGESGSGKTQLVLYTSIH-NLP-------KCSVYICTEDLFPAKRFNQI 516
GG TG+I E+FGE +GKTQ+ ++ LP ++YI TE F +R +
Sbjct: 116 GGIETGSITEMFGEFRTGKTQICHTLAVTCQLPIDRGGGEGKAMYIDTEGTFRPERLLAV 175
Query: 515 MNSIKSRDQDYGKNVFVEHISEAKDLQFCIRMQLPKLLQQNIVSLIVIDSIAAPFRVEST 336
D NV D Q + Q ++ ++ +L+++DS A +R T
Sbjct: 176 AERYGLSGSDVLDNVAYARAFNT-DHQTQLLYQASAMMVESRYALLIVDSATALYR---T 231
Query: 335 DYVQRAGEL--RELAI-----MLITLAQQYNIAIVCINQVTA 231
DY R GEL R++ + ML+ LA ++ +A+V NQV A
Sbjct: 232 DYSGR-GELSARQMHLARFLRMLLRLADEFGVAVVITNQVVA 272
>BC002723-1|AAH02723.1| 209|Homo sapiens RAD51L3 protein protein.
Length = 209
Score = 41.5 bits (93), Expect = 0.003
Identities = 29/79 (36%), Positives = 43/79 (54%), Gaps = 2/79 (2%)
Frame = -2
Query: 389 VSLIVIDSIAAPFRVESTDYVQRAGE--LRELAIMLITLAQQYNIAIVCINQVTASFADS 216
V ++V+DS+ A QR G + +LA L TLA+ +A+V N +T DS
Sbjct: 81 VKVVVVDSVTAVVS-PLLGGQQREGLALMMQLARELKTLARDLGMAVVVTNHITRD-RDS 138
Query: 215 DSIHPALGLAWSNMVSTRL 159
+ PALG +WS + STR+
Sbjct: 139 GRLKPALGRSWSFVPSTRI 157
>AB016225-1|BAA31749.1| 216|Homo sapiens TRAD-d3 protein.
Length = 216
Score = 41.5 bits (93), Expect = 0.003
Identities = 29/79 (36%), Positives = 43/79 (54%), Gaps = 2/79 (2%)
Frame = -2
Query: 389 VSLIVIDSIAAPFRVESTDYVQRAGE--LRELAIMLITLAQQYNIAIVCINQVTASFADS 216
V ++V+DS+ A QR G + +LA L TLA+ +A+V N +T DS
Sbjct: 88 VKVVVVDSVTAVVS-PLLGGQQREGLALMMQLARELKTLARDLGMAVVVTNHITRD-RDS 145
Query: 215 DSIHPALGLAWSNMVSTRL 159
+ PALG +WS + STR+
Sbjct: 146 GRLKPALGRSWSFVPSTRI 164
>AB018360-1|BAA33779.1| 95|Homo sapiens TRAD-d4 protein.
Length = 95
Score = 40.7 bits (91), Expect = 0.006
Identities = 19/42 (45%), Positives = 23/42 (54%)
Frame = -2
Query: 734 ELLVKNCKISTGCSKIDDILGGGFRTGTINEIFGESGSGKTQ 609
EL +STG +D +L G TG + EI G GSGKTQ
Sbjct: 41 ELKTSTAILSTGIGSLDKLLDAGLYTGEVTEIVGGPGSGKTQ 82
>BC035658-1|AAH35658.1| 165|Homo sapiens DMC1 protein protein.
Length = 165
Score = 40.3 bits (90), Expect = 0.007
Identities = 18/35 (51%), Positives = 23/35 (65%)
Frame = -2
Query: 710 ISTGCSKIDDILGGGFRTGTINEIFGESGSGKTQL 606
I+TG + D +LGGG + I E FGE +GKTQL
Sbjct: 101 ITTGSQEFDKLLGGGIESMAITEAFGEFRTGKTQL 135
>AL117459-1|CAB55937.1| 173|Homo sapiens hypothetical protein
protein.
Length = 173
Score = 39.9 bits (89), Expect = 0.010
Identities = 28/79 (35%), Positives = 42/79 (53%), Gaps = 2/79 (2%)
Frame = -2
Query: 389 VSLIVIDSIAAPFRVESTDYVQRAGE--LRELAIMLITLAQQYNIAIVCINQVTASFADS 216
V ++V+DS+ A QR G + +L L TLA+ +A+V N +T DS
Sbjct: 45 VKVVVVDSVTAVVS-PLLGGQQREGLALMMQLVRELKTLARDLGMAVVVTNHITRD-RDS 102
Query: 215 DSIHPALGLAWSNMVSTRL 159
+ PALG +WS + STR+
Sbjct: 103 GRLKPALGRSWSFVPSTRI 121
>BT007339-1|AAP36003.1| 134|Homo sapiens RAD51 homolog C (S.
cerevisiae) protein.
Length = 134
Score = 39.1 bits (87), Expect = 0.017
Identities = 20/35 (57%), Positives = 21/35 (60%)
Frame = -2
Query: 710 ISTGCSKIDDILGGGFRTGTINEIFGESGSGKTQL 606
I T CS +DDILGGG EI G G GKTQL
Sbjct: 100 IITFCSALDDILGGGVPLMKTTEICGAPGVGKTQL 134
>BC101485-1|AAI01486.1| 134|Homo sapiens RAD51C protein protein.
Length = 134
Score = 39.1 bits (87), Expect = 0.017
Identities = 20/35 (57%), Positives = 21/35 (60%)
Frame = -2
Query: 710 ISTGCSKIDDILGGGFRTGTINEIFGESGSGKTQL 606
I T CS +DDILGGG EI G G GKTQL
Sbjct: 100 IITFCSALDDILGGGVPLMKTTEICGAPGVGKTQL 134
>BC093930-1|AAH93930.1| 134|Homo sapiens RAD51C protein protein.
Length = 134
Score = 39.1 bits (87), Expect = 0.017
Identities = 20/35 (57%), Positives = 21/35 (60%)
Frame = -2
Query: 710 ISTGCSKIDDILGGGFRTGTINEIFGESGSGKTQL 606
I T CS +DDILGGG EI G G GKTQL
Sbjct: 100 IITFCSALDDILGGGVPLMKTTEICGAPGVGKTQL 134
>BC000667-1|AAH00667.1| 134|Homo sapiens RAD51C protein protein.
Length = 134
Score = 39.1 bits (87), Expect = 0.017
Identities = 20/35 (57%), Positives = 21/35 (60%)
Frame = -2
Query: 710 ISTGCSKIDDILGGGFRTGTINEIFGESGSGKTQL 606
I T CS +DDILGGG EI G G GKTQL
Sbjct: 100 IITFCSALDDILGGGVPLMKTTEICGAPGVGKTQL 134
>AF029670-1|AAC39605.1| 135|Homo sapiens Rad51C truncated protein
protein.
Length = 135
Score = 39.1 bits (87), Expect = 0.017
Identities = 20/35 (57%), Positives = 21/35 (60%)
Frame = -2
Query: 710 ISTGCSKIDDILGGGFRTGTINEIFGESGSGKTQL 606
I T CS +DDILGGG EI G G GKTQL
Sbjct: 100 IITFCSALDDILGGGVPLMKTTEICGAPGVGKTQL 134
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,682,783
Number of Sequences: 237096
Number of extensions: 1972375
Number of successful extensions: 4039
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 3830
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3993
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9071127468
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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