Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P17_pT_J02
(753 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF069531-1|AAC42663.1| 341|Drosophila melanogaster spindle B pr... 151 1e-36
AE014297-1844|AAF55050.1| 341|Drosophila melanogaster CG3325-PA... 151 1e-36
AY070920-1|AAL48542.1| 341|Drosophila melanogaster RE02671p pro... 149 3e-36
L41342-1|AAA64873.1| 336|Drosophila melanogaster protein ( Dros... 78 1e-14
D37788-1|BAA07039.1| 336|Drosophila melanogaster RecA protein h... 78 1e-14
D17726-1|BAA04580.1| 336|Drosophila melanogaster Rad51 protein. 78 1e-14
BT001791-1|AAN71546.1| 284|Drosophila melanogaster RH24133p pro... 78 1e-14
AE014297-4533|AAN14213.1| 279|Drosophila melanogaster CG7948-PB... 78 1e-14
AE014297-4532|AAF57005.1| 336|Drosophila melanogaster CG7948-PA... 78 1e-14
AY257540-1|AAP13056.1| 270|Drosophila melanogaster spindle D pr... 53 5e-07
AY071162-1|AAL48784.1| 270|Drosophila melanogaster RE19845p pro... 53 5e-07
AE014297-4083|AAN14399.1| 270|Drosophila melanogaster CG31069-P... 53 5e-07
U39739-1|AAA82056.1| 666|Drosophila melanogaster scarlet protei... 33 0.42
AE014296-2748|AAF49455.1| 666|Drosophila melanogaster CG4314-PA... 32 0.97
AY075521-1|AAL68329.1| 623|Drosophila melanogaster RE70153p pro... 31 1.3
AE014296-1994|AAF50035.2| 623|Drosophila melanogaster CG32091-P... 31 1.3
BT010208-1|AAQ23526.1| 666|Drosophila melanogaster RH66336p pro... 31 2.2
AY058708-1|AAL13937.1| 286|Drosophila melanogaster LD43816p pro... 31 2.2
AE014297-1454|AAF54752.2| 286|Drosophila melanogaster CG4702-PA... 31 2.2
AY069801-1|AAL39946.1| 766|Drosophila melanogaster SD03967p pro... 30 3.9
AE014134-294|AAN10460.1| 766|Drosophila melanogaster CG17646-PB... 30 3.9
AE014134-293|AAF51341.3| 766|Drosophila melanogaster CG17646-PA... 30 3.9
>AF069531-1|AAC42663.1| 341|Drosophila melanogaster spindle B
protein.
Length = 341
Score = 151 bits (365), Expect = 1e-36
Identities = 94/252 (37%), Positives = 146/252 (57%), Gaps = 12/252 (4%)
Frame = -2
Query: 725 VKNCKISTGCSKIDDILGGGFRTGTINEIFGESGSGKTQLVLYTSI--------HNLPKC 570
V+ ++S GCS +D GGG T I E+ G +G GKTQL+L S+ L K
Sbjct: 83 VRWSRVSFGCSALDRCTGGGVVTRGITELCGAAGVGKTQLLLQLSLCVQLPRELGGLGKG 142
Query: 569 SVYICTEDLFPAKRFNQIMNSIKSR----DQDYGKNVFVEHISEAKDLQFCIRMQLPKLL 402
YICTE FPA+R Q+ + + R + ++ N+FVE+ EA+ L C+ ++P+L+
Sbjct: 143 VAYICTESSFPARRLLQMSKACEKRHPEMELNFLGNIFVENHIEAEPLLACVINRIPRLM 202
Query: 401 QQNIVSLIVIDSIAAPFRVESTDYVQRAGELRELAIMLITLAQQYNIAIVCINQVTASFA 222
QQ+ + LI+IDS+AA FR+ + DY++RA +R LA L++ A +YN A+VC+NQV A+
Sbjct: 203 QQHGIGLIIIDSVAAIFRLYN-DYLERARHMRRLADALLSYADKYNCAVVCVNQV-ATRD 260
Query: 221 DSDSIHPALGLAWSNMVSTRLRISKTTQSVIIDDSGVCKSDSGGQNKLFAREISVVFAPD 42
D I P LGL W+++ TRLR+S+ V K G + R++ ++++P+
Sbjct: 261 GQDEI-PCLGLQWAHLGRTRLRVSR-----------VPKQHRMGDQLITVRKLEILYSPE 308
Query: 41 LANSSTLFTITS 6
N F IT+
Sbjct: 309 TPNDFAEFLITA 320
>AE014297-1844|AAF55050.1| 341|Drosophila melanogaster CG3325-PA
protein.
Length = 341
Score = 151 bits (365), Expect = 1e-36
Identities = 94/252 (37%), Positives = 146/252 (57%), Gaps = 12/252 (4%)
Frame = -2
Query: 725 VKNCKISTGCSKIDDILGGGFRTGTINEIFGESGSGKTQLVLYTSI--------HNLPKC 570
V+ ++S GCS +D GGG T I E+ G +G GKTQL+L S+ L K
Sbjct: 83 VRWSRVSFGCSALDRCTGGGVVTRGITELCGAAGVGKTQLLLQLSLCVQLPRELGGLGKG 142
Query: 569 SVYICTEDLFPAKRFNQIMNSIKSR----DQDYGKNVFVEHISEAKDLQFCIRMQLPKLL 402
YICTE FPA+R Q+ + + R + ++ N+FVE+ EA+ L C+ ++P+L+
Sbjct: 143 VAYICTESSFPARRLLQMSKACEKRHPEMELNFLGNIFVENHIEAEPLLACVINRIPRLM 202
Query: 401 QQNIVSLIVIDSIAAPFRVESTDYVQRAGELRELAIMLITLAQQYNIAIVCINQVTASFA 222
QQ+ + LI+IDS+AA FR+ + DY++RA +R LA L++ A +YN A+VC+NQV A+
Sbjct: 203 QQHGIGLIIIDSVAAIFRLYN-DYLERARHMRRLADALLSYADKYNCAVVCVNQV-ATRD 260
Query: 221 DSDSIHPALGLAWSNMVSTRLRISKTTQSVIIDDSGVCKSDSGGQNKLFAREISVVFAPD 42
D I P LGL W+++ TRLR+S+ V K G + R++ ++++P+
Sbjct: 261 GQDEI-PCLGLQWAHLGRTRLRVSR-----------VPKQHRMGDQLITVRKLEILYSPE 308
Query: 41 LANSSTLFTITS 6
N F IT+
Sbjct: 309 TPNDFAEFLITA 320
>AY070920-1|AAL48542.1| 341|Drosophila melanogaster RE02671p
protein.
Length = 341
Score = 149 bits (362), Expect = 3e-36
Identities = 93/252 (36%), Positives = 146/252 (57%), Gaps = 12/252 (4%)
Frame = -2
Query: 725 VKNCKISTGCSKIDDILGGGFRTGTINEIFGESGSGKTQLVLYTSI--------HNLPKC 570
V+ ++S GCS +D GGG T I E+ G +G GKT+L+L S+ L K
Sbjct: 83 VRWSRVSFGCSALDRCTGGGVVTRGITELCGAAGVGKTELLLQLSLCVQLPRELGGLGKG 142
Query: 569 SVYICTEDLFPAKRFNQIMNSIKSR----DQDYGKNVFVEHISEAKDLQFCIRMQLPKLL 402
YICTE FPA+R Q+ + + R + ++ N+FVE+ EA+ L C+ ++P+L+
Sbjct: 143 VAYICTESSFPARRLLQMSKACEKRHPEMELNFLGNIFVENHIEAEPLLACVINRIPRLM 202
Query: 401 QQNIVSLIVIDSIAAPFRVESTDYVQRAGELRELAIMLITLAQQYNIAIVCINQVTASFA 222
QQ+ + LI+IDS+AA FR+ + DY++RA +R LA L++ A +YN A+VC+NQV A+
Sbjct: 203 QQHGIGLIIIDSVAAIFRLYN-DYLERARHMRRLADALLSYADKYNCAVVCVNQV-ATRD 260
Query: 221 DSDSIHPALGLAWSNMVSTRLRISKTTQSVIIDDSGVCKSDSGGQNKLFAREISVVFAPD 42
D I P LGL W+++ TRLR+S+ V K G + R++ ++++P+
Sbjct: 261 GQDEI-PCLGLQWAHLGRTRLRVSR-----------VPKQHRMGDQLITVRKLEILYSPE 308
Query: 41 LANSSTLFTITS 6
N F IT+
Sbjct: 309 TPNDFAEFLITA 320
>L41342-1|AAA64873.1| 336|Drosophila melanogaster protein (
Drosophila melanogaster(clone pDmR2210) RAD51 homolog
gene, complete cds. ).
Length = 336
Score = 78.2 bits (184), Expect = 1e-14
Identities = 64/205 (31%), Positives = 98/205 (47%), Gaps = 16/205 (7%)
Frame = -2
Query: 713 KISTGCSKIDDILGGGFRTGTINEIFGESGSGKTQLVLYTSIH-NLP--------KCSVY 561
++STG ++D +LGGG TG+I EIFGE GKTQL ++ LP KC +Y
Sbjct: 98 QLSTGSKELDKLLGGGIETGSITEIFGEFRCGKTQLCHTLAVTCQLPISQKGGEGKC-MY 156
Query: 560 ICTEDLFPAKRFNQIMNSIKSRDQDYGKNVFVEHISEAKDLQFCIRMQLPKLLQQNIVSL 381
I TE+ F +R I K + + NV + I+M L + +L
Sbjct: 157 IDTENTFRPERLAAIAQRYKLNESEVLDNVAFTRAHNSDQQTKLIQMAAGMLFESR-YAL 215
Query: 380 IVIDSIAAPFRVESTDYVQRAGELRELAI---MLITLAQQYNIAIVCINQVTASFADS-- 216
+++DS A +R + + A L + ML LA ++ +A+V NQVTAS +
Sbjct: 216 LIVDSAMALYRSDYIGRGELAARQNHLGLFLRMLQRLADEFGVAVVITNQVTASLDGAPG 275
Query: 215 --DSIHPALGLAWSNMVSTRLRISK 147
D+ P G ++ +TRL + K
Sbjct: 276 MFDAKKPIGGHIMAHSSTTRLYLRK 300
>D37788-1|BAA07039.1| 336|Drosophila melanogaster RecA protein
homologue protein.
Length = 336
Score = 78.2 bits (184), Expect = 1e-14
Identities = 64/205 (31%), Positives = 98/205 (47%), Gaps = 16/205 (7%)
Frame = -2
Query: 713 KISTGCSKIDDILGGGFRTGTINEIFGESGSGKTQLVLYTSIH-NLP--------KCSVY 561
++STG ++D +LGGG TG+I EIFGE GKTQL ++ LP KC +Y
Sbjct: 98 QLSTGSKELDKLLGGGIETGSITEIFGEFRCGKTQLCHTLAVTCQLPISQKGGEGKC-MY 156
Query: 560 ICTEDLFPAKRFNQIMNSIKSRDQDYGKNVFVEHISEAKDLQFCIRMQLPKLLQQNIVSL 381
I TE+ F +R I K + + NV + I+M L + +L
Sbjct: 157 IDTENTFRPERLAAIAQRYKLNESEVLDNVAFTRAHNSDQQTKLIQMAAGMLFESR-YAL 215
Query: 380 IVIDSIAAPFRVESTDYVQRAGELRELAI---MLITLAQQYNIAIVCINQVTASFADS-- 216
+++DS A +R + + A L + ML LA ++ +A+V NQVTAS +
Sbjct: 216 LIVDSAMALYRSDYIGRGELAARQNHLGLFLRMLQRLADEFGVAVVITNQVTASLDGAPG 275
Query: 215 --DSIHPALGLAWSNMVSTRLRISK 147
D+ P G ++ +TRL + K
Sbjct: 276 MFDAKKPIGGHIMAHSSTTRLYLRK 300
>D17726-1|BAA04580.1| 336|Drosophila melanogaster Rad51 protein.
Length = 336
Score = 78.2 bits (184), Expect = 1e-14
Identities = 64/205 (31%), Positives = 98/205 (47%), Gaps = 16/205 (7%)
Frame = -2
Query: 713 KISTGCSKIDDILGGGFRTGTINEIFGESGSGKTQLVLYTSIH-NLP--------KCSVY 561
++STG ++D +LGGG TG+I EIFGE GKTQL ++ LP KC +Y
Sbjct: 98 QLSTGSKELDKLLGGGIETGSITEIFGEFRCGKTQLCHTLAVTCQLPISQKGGEGKC-MY 156
Query: 560 ICTEDLFPAKRFNQIMNSIKSRDQDYGKNVFVEHISEAKDLQFCIRMQLPKLLQQNIVSL 381
I TE+ F +R I K + + NV + I+M L + +L
Sbjct: 157 IDTENTFRPERLAAIAQRYKLNESEVLDNVAFTRAHNSDQQTKLIQMAAGMLFESR-YAL 215
Query: 380 IVIDSIAAPFRVESTDYVQRAGELRELAI---MLITLAQQYNIAIVCINQVTASFADS-- 216
+++DS A +R + + A L + ML LA ++ +A+V NQVTAS +
Sbjct: 216 LIVDSAMALYRSDYIGRGELAARQNHLGLFLRMLQRLADEFGVAVVITNQVTASLDGAPG 275
Query: 215 --DSIHPALGLAWSNMVSTRLRISK 147
D+ P G ++ +TRL + K
Sbjct: 276 MFDAKKPIGGHIMAHSSTTRLYLRK 300
>BT001791-1|AAN71546.1| 284|Drosophila melanogaster RH24133p
protein.
Length = 284
Score = 78.2 bits (184), Expect = 1e-14
Identities = 64/205 (31%), Positives = 98/205 (47%), Gaps = 16/205 (7%)
Frame = -2
Query: 713 KISTGCSKIDDILGGGFRTGTINEIFGESGSGKTQLVLYTSIH-NLP--------KCSVY 561
++STG ++D +LGGG TG+I EIFGE GKTQL ++ LP KC +Y
Sbjct: 41 QLSTGSKELDKLLGGGIETGSITEIFGEFRCGKTQLCHTLAVTCQLPISQKGGEGKC-MY 99
Query: 560 ICTEDLFPAKRFNQIMNSIKSRDQDYGKNVFVEHISEAKDLQFCIRMQLPKLLQQNIVSL 381
I TE+ F +R I K + + NV + I+M L + +L
Sbjct: 100 IDTENTFRPERLAAIAQRYKLNESEVLDNVAFTRAHNSDQQTKLIQMAAGMLFESR-YAL 158
Query: 380 IVIDSIAAPFRVESTDYVQRAGELRELAI---MLITLAQQYNIAIVCINQVTASFADS-- 216
+++DS A +R + + A L + ML LA ++ +A+V NQVTAS +
Sbjct: 159 LIVDSAMALYRSDYIGRGELAARQNHLGLFLRMLQRLADEFGVAVVITNQVTASLDGAPG 218
Query: 215 --DSIHPALGLAWSNMVSTRLRISK 147
D+ P G ++ +TRL + K
Sbjct: 219 MFDAKKPIGGHIMAHSSTTRLYLRK 243
>AE014297-4533|AAN14213.1| 279|Drosophila melanogaster CG7948-PB,
isoform B protein.
Length = 279
Score = 78.2 bits (184), Expect = 1e-14
Identities = 64/205 (31%), Positives = 98/205 (47%), Gaps = 16/205 (7%)
Frame = -2
Query: 713 KISTGCSKIDDILGGGFRTGTINEIFGESGSGKTQLVLYTSIH-NLP--------KCSVY 561
++STG ++D +LGGG TG+I EIFGE GKTQL ++ LP KC +Y
Sbjct: 41 QLSTGSKELDKLLGGGIETGSITEIFGEFRCGKTQLCHTLAVTCQLPISQKGGEGKC-MY 99
Query: 560 ICTEDLFPAKRFNQIMNSIKSRDQDYGKNVFVEHISEAKDLQFCIRMQLPKLLQQNIVSL 381
I TE+ F +R I K + + NV + I+M L + +L
Sbjct: 100 IDTENTFRPERLAAIAQRYKLNESEVLDNVAFTRAHNSDQQTKLIQMAAGMLFESR-YAL 158
Query: 380 IVIDSIAAPFRVESTDYVQRAGELRELAI---MLITLAQQYNIAIVCINQVTASFADS-- 216
+++DS A +R + + A L + ML LA ++ +A+V NQVTAS +
Sbjct: 159 LIVDSAMALYRSDYIGRGELAARQNHLGLFLRMLQRLADEFGVAVVITNQVTASLDGAPG 218
Query: 215 --DSIHPALGLAWSNMVSTRLRISK 147
D+ P G ++ +TRL + K
Sbjct: 219 MFDAKKPIGGHIMAHSSTTRLYLRK 243
>AE014297-4532|AAF57005.1| 336|Drosophila melanogaster CG7948-PA,
isoform A protein.
Length = 336
Score = 78.2 bits (184), Expect = 1e-14
Identities = 64/205 (31%), Positives = 98/205 (47%), Gaps = 16/205 (7%)
Frame = -2
Query: 713 KISTGCSKIDDILGGGFRTGTINEIFGESGSGKTQLVLYTSIH-NLP--------KCSVY 561
++STG ++D +LGGG TG+I EIFGE GKTQL ++ LP KC +Y
Sbjct: 98 QLSTGSKELDKLLGGGIETGSITEIFGEFRCGKTQLCHTLAVTCQLPISQKGGEGKC-MY 156
Query: 560 ICTEDLFPAKRFNQIMNSIKSRDQDYGKNVFVEHISEAKDLQFCIRMQLPKLLQQNIVSL 381
I TE+ F +R I K + + NV + I+M L + +L
Sbjct: 157 IDTENTFRPERLAAIAQRYKLNESEVLDNVAFTRAHNSDQQTKLIQMAAGMLFESR-YAL 215
Query: 380 IVIDSIAAPFRVESTDYVQRAGELRELAI---MLITLAQQYNIAIVCINQVTASFADS-- 216
+++DS A +R + + A L + ML LA ++ +A+V NQVTAS +
Sbjct: 216 LIVDSAMALYRSDYIGRGELAARQNHLGLFLRMLQRLADEFGVAVVITNQVTASLDGAPG 275
Query: 215 --DSIHPALGLAWSNMVSTRLRISK 147
D+ P G ++ +TRL + K
Sbjct: 276 MFDAKKPIGGHIMAHSSTTRLYLRK 300
>AY257540-1|AAP13056.1| 270|Drosophila melanogaster spindle D
protein.
Length = 270
Score = 52.8 bits (121), Expect = 5e-07
Identities = 59/212 (27%), Positives = 95/212 (44%), Gaps = 20/212 (9%)
Frame = -2
Query: 713 KISTGCSKIDDILGGGFRTGTINEIFGESGSGKTQLVLYTSIH-NLPKCSVYICTEDLFP 537
KI TG +D GGG G + E+ G SG+GKTQ+ L ++ +PK + + LF
Sbjct: 45 KILTGKKALDTHFGGGISLGHLVELIGNSGTGKTQMCLQLCLNVQIPKAAGGLEGSALFI 104
Query: 536 AKRF----NQIMNSIKSRDQDYGKNVFVEHISEAKDLQFCIRMQLPKL--LQQNIVS--- 384
R +++M ++ Y V K LQ ++ PKL L ++S
Sbjct: 105 DTRQDFHPDRLMGLALKLERQYAHR--VPEFKAHKMLQKIHYVRCPKLDQLMATVLSCHR 162
Query: 383 ---------LIVIDSIAAPFRVESTDYVQRAGELRELAIMLITLAQQYNIAIVCINQVTA 231
LIVIDS+A R+ D R L EL + L +Q+ + V N +T
Sbjct: 163 HLVDHPDIKLIVIDSLAFTLRM-LEDGAHRYEMLLELHESMRRLQRQHELTWVFTNVLTH 221
Query: 230 SFADSD-SIHPALGLAWSNMVSTRLRISKTTQ 138
+ + PALG S++++ R+ S +++
Sbjct: 222 RYVKQKFQVEPALGDLHSHLINERIWFSGSSE 253
>AY071162-1|AAL48784.1| 270|Drosophila melanogaster RE19845p
protein.
Length = 270
Score = 52.8 bits (121), Expect = 5e-07
Identities = 59/212 (27%), Positives = 95/212 (44%), Gaps = 20/212 (9%)
Frame = -2
Query: 713 KISTGCSKIDDILGGGFRTGTINEIFGESGSGKTQLVLYTSIH-NLPKCSVYICTEDLFP 537
KI TG +D GGG G + E+ G SG+GKTQ+ L ++ +PK + + LF
Sbjct: 45 KILTGKKALDTHFGGGISLGHLVELIGNSGTGKTQMCLQLCLNVQIPKAAGGLEGSALFI 104
Query: 536 AKRF----NQIMNSIKSRDQDYGKNVFVEHISEAKDLQFCIRMQLPKL--LQQNIVS--- 384
R +++M ++ Y V K LQ ++ PKL L ++S
Sbjct: 105 DTRQDFHPDRLMGLALKLERQYAHR--VPEFKAHKMLQKIHYVRCPKLDQLMATVLSCHR 162
Query: 383 ---------LIVIDSIAAPFRVESTDYVQRAGELRELAIMLITLAQQYNIAIVCINQVTA 231
LIVIDS+A R+ D R L EL + L +Q+ + V N +T
Sbjct: 163 HLVDHPDIKLIVIDSLAFTLRM-LEDGAHRYEMLLELHESMRRLQRQHELTWVFTNVLTH 221
Query: 230 SFADSD-SIHPALGLAWSNMVSTRLRISKTTQ 138
+ + PALG S++++ R+ S +++
Sbjct: 222 RYVKQKFQVEPALGDLHSHLINERIWFSGSSE 253
>AE014297-4083|AAN14399.1| 270|Drosophila melanogaster CG31069-PA
protein.
Length = 270
Score = 52.8 bits (121), Expect = 5e-07
Identities = 59/212 (27%), Positives = 95/212 (44%), Gaps = 20/212 (9%)
Frame = -2
Query: 713 KISTGCSKIDDILGGGFRTGTINEIFGESGSGKTQLVLYTSIH-NLPKCSVYICTEDLFP 537
KI TG +D GGG G + E+ G SG+GKTQ+ L ++ +PK + + LF
Sbjct: 45 KILTGKKALDTHFGGGISLGHLVELIGNSGTGKTQMCLQLCLNVQIPKAAGGLEGSALFI 104
Query: 536 AKRF----NQIMNSIKSRDQDYGKNVFVEHISEAKDLQFCIRMQLPKL--LQQNIVS--- 384
R +++M ++ Y V K LQ ++ PKL L ++S
Sbjct: 105 DTRQDFHPDRLMGLALKLERQYAHR--VPEFKAHKMLQKIHYVRCPKLDQLMATVLSCHR 162
Query: 383 ---------LIVIDSIAAPFRVESTDYVQRAGELRELAIMLITLAQQYNIAIVCINQVTA 231
LIVIDS+A R+ D R L EL + L +Q+ + V N +T
Sbjct: 163 HLVDHPDIKLIVIDSLAFTLRM-LEDGAHRYEMLLELHESMRRLQRQHELTWVFTNVLTH 221
Query: 230 SFADSD-SIHPALGLAWSNMVSTRLRISKTTQ 138
+ + PALG S++++ R+ S +++
Sbjct: 222 RYVKQKFQVEPALGDLHSHLINERIWFSGSSE 253
>U39739-1|AAA82056.1| 666|Drosophila melanogaster scarlet protein
protein.
Length = 666
Score = 33.1 bits (72), Expect = 0.42
Identities = 25/99 (25%), Positives = 47/99 (47%)
Frame = -2
Query: 671 GGFRTGTINEIFGESGSGKTQLVLYTSIHNLPKCSVYICTEDLFPAKRFNQIMNSIKSRD 492
G + GT+ + G SGSGKT L + T P +V + + L +R M+ ++
Sbjct: 96 GAIQPGTLMALMGSSGSGKTTL-MSTLAFRQPAGTV-VQGDILINGRRIGPFMH--RNHG 151
Query: 491 QDYGKNVFVEHISEAKDLQFCIRMQLPKLLQQNIVSLIV 375
Y ++F+ +S + L F ++L + + + LI+
Sbjct: 152 YVYQDDLFLGSVSVLEHLNFMAHLRLDRRVSKEERRLII 190
>AE014296-2748|AAF49455.1| 666|Drosophila melanogaster CG4314-PA
protein.
Length = 666
Score = 31.9 bits (69), Expect = 0.97
Identities = 25/99 (25%), Positives = 46/99 (46%)
Frame = -2
Query: 671 GGFRTGTINEIFGESGSGKTQLVLYTSIHNLPKCSVYICTEDLFPAKRFNQIMNSIKSRD 492
G + GT+ + G SGSGKT L + T P +V + + L +R M+ I
Sbjct: 96 GAIQPGTLMALMGSSGSGKTTL-MSTLAFRQPAGTV-VQGDILINGRRIGPFMHRISG-- 151
Query: 491 QDYGKNVFVEHISEAKDLQFCIRMQLPKLLQQNIVSLIV 375
Y ++F+ ++ + L F ++L + + + LI+
Sbjct: 152 YVYQDDLFLGSLTVLEHLNFMAHLRLDRRVSKEERRLII 190
>AY075521-1|AAL68329.1| 623|Drosophila melanogaster RE70153p
protein.
Length = 623
Score = 31.5 bits (68), Expect = 1.3
Identities = 16/40 (40%), Positives = 24/40 (60%)
Frame = -2
Query: 722 KNCKISTGCSKIDDILGGGFRTGTINEIFGESGSGKTQLV 603
KN TG +I + + G FR G ++ I G SG+GK+ L+
Sbjct: 28 KNFWRVTGERRILNGVSGSFRNGQLSAIMGPSGAGKSSLL 67
>AE014296-1994|AAF50035.2| 623|Drosophila melanogaster CG32091-PB
protein.
Length = 623
Score = 31.5 bits (68), Expect = 1.3
Identities = 16/40 (40%), Positives = 24/40 (60%)
Frame = -2
Query: 722 KNCKISTGCSKIDDILGGGFRTGTINEIFGESGSGKTQLV 603
KN TG +I + + G FR G ++ I G SG+GK+ L+
Sbjct: 28 KNFWRVTGERRILNGVSGSFRNGQLSAIMGPSGAGKSSLL 67
>BT010208-1|AAQ23526.1| 666|Drosophila melanogaster RH66336p
protein.
Length = 666
Score = 30.7 bits (66), Expect = 2.2
Identities = 22/99 (22%), Positives = 45/99 (45%)
Frame = -2
Query: 671 GGFRTGTINEIFGESGSGKTQLVLYTSIHNLPKCSVYICTEDLFPAKRFNQIMNSIKSRD 492
G + GT+ + G SGSGKT L+ +++ + + L +R M+ I
Sbjct: 96 GAIQPGTLMALMGSSGSGKTTLM--STLAFRQTAGTVVQGDILINGRRIGPFMHRISG-- 151
Query: 491 QDYGKNVFVEHISEAKDLQFCIRMQLPKLLQQNIVSLIV 375
Y ++F+ ++ + L F ++L + + + LI+
Sbjct: 152 YVYQDDLFLGSLTVLEHLNFMAHLRLDRRVSKEERRLII 190
>AY058708-1|AAL13937.1| 286|Drosophila melanogaster LD43816p
protein.
Length = 286
Score = 30.7 bits (66), Expect = 2.2
Identities = 19/60 (31%), Positives = 27/60 (45%), Gaps = 3/60 (5%)
Frame = -2
Query: 245 NQVTASFADSDSIHPALGLA---WSNMVSTRLRISKTTQSVIIDDSGVCKSDSGGQNKLF 75
N S SD + ++GL W+N++S LRI T G+ K D+GG F
Sbjct: 103 NGAVNSPTKSDDVDSSIGLGGSPWANVISMGLRIINTLLGGGAPSDGIDKVDNGGSPMQF 162
>AE014297-1454|AAF54752.2| 286|Drosophila melanogaster CG4702-PA
protein.
Length = 286
Score = 30.7 bits (66), Expect = 2.2
Identities = 19/60 (31%), Positives = 27/60 (45%), Gaps = 3/60 (5%)
Frame = -2
Query: 245 NQVTASFADSDSIHPALGLA---WSNMVSTRLRISKTTQSVIIDDSGVCKSDSGGQNKLF 75
N S SD + ++GL W+N++S LRI T G+ K D+GG F
Sbjct: 103 NGAVNSPTKSDDVDSSIGLGGSPWANVISMGLRIINTLLGGGAPSDGIDKVDNGGSPMQF 162
>AY069801-1|AAL39946.1| 766|Drosophila melanogaster SD03967p
protein.
Length = 766
Score = 29.9 bits (64), Expect = 3.9
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = -2
Query: 677 LGGGFRTGTINEIFGESGSGKTQLV 603
L G FR+G + I G SG+GK+ L+
Sbjct: 134 LNGSFRSGELTAIMGPSGAGKSTLL 158
>AE014134-294|AAN10460.1| 766|Drosophila melanogaster CG17646-PB,
isoform B protein.
Length = 766
Score = 29.9 bits (64), Expect = 3.9
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = -2
Query: 677 LGGGFRTGTINEIFGESGSGKTQLV 603
L G FR+G + I G SG+GK+ L+
Sbjct: 134 LNGSFRSGELTAIMGPSGAGKSTLL 158
>AE014134-293|AAF51341.3| 766|Drosophila melanogaster CG17646-PA,
isoform A protein.
Length = 766
Score = 29.9 bits (64), Expect = 3.9
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = -2
Query: 677 LGGGFRTGTINEIFGESGSGKTQLV 603
L G FR+G + I G SG+GK+ L+
Sbjct: 134 LNGSFRSGELTAIMGPSGAGKSTLL 158
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,629,850
Number of Sequences: 53049
Number of extensions: 615072
Number of successful extensions: 1766
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1665
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1747
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3437745267
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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