Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_pT_I17
         (754 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY703685-1|AAU12681.1|  200|Apis mellifera abdominal-A protein.        23   3.1  
DQ325118-1|ABD14132.1|  181|Apis mellifera complementary sex det...    22   5.4  
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    22   5.4  
DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protei...    22   7.1  
DQ325130-1|ABD14144.1|  174|Apis mellifera complementary sex det...    21   9.4  
DQ325129-1|ABD14143.1|  174|Apis mellifera complementary sex det...    21   9.4  
DQ325128-1|ABD14142.1|  174|Apis mellifera complementary sex det...    21   9.4  
DQ325127-1|ABD14141.1|  174|Apis mellifera complementary sex det...    21   9.4  
DQ325126-1|ABD14140.1|  174|Apis mellifera complementary sex det...    21   9.4  
DQ325125-1|ABD14139.1|  174|Apis mellifera complementary sex det...    21   9.4  
AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice...    21   9.4  

>AY703685-1|AAU12681.1|  200|Apis mellifera abdominal-A protein.
          Length = 200

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 11/28 (39%), Positives = 13/28 (46%)
 Frame = +3

Query: 435 SPVGHPPIESHSACKKGPAARCMAPSTP 518
           SP G  P  S S+    PAAR  +   P
Sbjct: 63  SPTGSSPQHSGSSASTSPAARTTSSMYP 90


>DQ325118-1|ABD14132.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +3

Query: 486 PAARCMAPSTPPPAF 530
           P  RC+ P TP P F
Sbjct: 146 PRFRCIGPPTPFPRF 160


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 9/47 (19%), Positives = 24/47 (51%)
 Frame = +2

Query: 11  YTGNTKFNSY*KEKKLIFYLFVLCIANYS*KLKCRKVKLHQRLVNLH 151
           + G+ +  +  +  +L +Y+    +A Y+ +  C ++   +R +N H
Sbjct: 218 FEGDIRIVNKDRRGELFYYMHQQIMARYNCERLCNRLGRVKRFINWH 264


>DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protein
           protein.
          Length = 424

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -1

Query: 163 LPIDVEIYETLMQ 125
           LPIDV++Y T  Q
Sbjct: 58  LPIDVDVYNTEQQ 70


>DQ325130-1|ABD14144.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = -3

Query: 701 KSRN*FQEKHHRRFEGV*EDKDKHXEE 621
           + RN    K  RR+E +  +K+K  EE
Sbjct: 6   RDRNREYRKKDRRYEKLHNEKEKFLEE 32


>DQ325129-1|ABD14143.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = -3

Query: 701 KSRN*FQEKHHRRFEGV*EDKDKHXEE 621
           + RN    K  RR+E +  +K+K  EE
Sbjct: 6   RDRNREYRKKDRRYEKLHNEKEKFLEE 32


>DQ325128-1|ABD14142.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = -3

Query: 701 KSRN*FQEKHHRRFEGV*EDKDKHXEE 621
           + RN    K  RR+E +  +K+K  EE
Sbjct: 6   RDRNREYRKKDRRYEKLHNEKEKFLEE 32


>DQ325127-1|ABD14141.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = -3

Query: 701 KSRN*FQEKHHRRFEGV*EDKDKHXEE 621
           + RN    K  RR+E +  +K+K  EE
Sbjct: 6   RDRNREYRKKDRRYEKLHNEKEKFLEE 32


>DQ325126-1|ABD14140.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = -3

Query: 701 KSRN*FQEKHHRRFEGV*EDKDKHXEE 621
           + RN    K  RR+E +  +K+K  EE
Sbjct: 6   RDRNREYRKKDRRYEKLHNEKEKFLEE 32


>DQ325125-1|ABD14139.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = -3

Query: 701 KSRN*FQEKHHRRFEGV*EDKDKHXEE 621
           + RN    K  RR+E +  +K+K  EE
Sbjct: 6   RDRNREYRKKDRRYEKLHNEKEKFLEE 32


>AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice
           variant B protein.
          Length = 810

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 18/56 (32%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
 Frame = -1

Query: 304 IKSIAFPCISTGIYGFPNRLAAHIALRTARKFLETNTEMNRIIFCTFLPI-DVEIY 140
           +KS+      T  YG     A H AL TA     T +E + + F  + P+ D +IY
Sbjct: 750 VKSLRLEGDETPPYGMELTEAEHYALYTAMAPHATASEFDEMSF-YYSPVEDGKIY 804


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 200,102
Number of Sequences: 438
Number of extensions: 4173
Number of successful extensions: 30
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23632110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)