Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_pT_I12
         (719 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY423354-1|AAQ94040.1|  112|Anopheles gambiae defender against p...    25   2.4  
AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcript...    24   4.1  
AF364130-1|AAL35506.1|  417|Anopheles gambiae putative odorant r...    23   9.5  

>AY423354-1|AAQ94040.1|  112|Anopheles gambiae defender against
           programmed cell death protein.
          Length = 112

 Score = 25.0 bits (52), Expect = 2.4
 Identities = 17/43 (39%), Positives = 21/43 (48%)
 Frame = -1

Query: 257 LAM*INNVRCTSLAILVALVVNAQNKTLFGGR*GFIPKRVFVD 129
           LA  I+ V C  L + + L  N QNK  F    G  P+R F D
Sbjct: 56  LAGFISTVSCFVLGVCLRLQSNPQNKEQFF---GISPERGFAD 95


>AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1209

 Score = 24.2 bits (50), Expect = 4.1
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +2

Query: 164 VHQTRSYFVRSPQGPQVWR 220
           +HQ RSYFV S    +++R
Sbjct: 898 IHQLRSYFVESQNRHELYR 916


>AF364130-1|AAL35506.1|  417|Anopheles gambiae putative odorant
           receptor Or1 protein.
          Length = 417

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 9/27 (33%), Positives = 13/27 (48%)
 Frame = -3

Query: 531 FYLIAYTQITVLFCFLSGSFCDYTIKF 451
           FYL+  T    +FC++       T KF
Sbjct: 323 FYLLVMTSQVFIFCYVGNEISYTTDKF 349


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 633,678
Number of Sequences: 2352
Number of extensions: 11350
Number of successful extensions: 16
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 73181328
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)