Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P17_pT_I10
(761 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1442.06 |||20S proteasome component alpha 2|Schizosaccharomy... 265 4e-72
SPBC106.16 |||20S proteasome component alpha 4|Schizosaccharomyc... 159 4e-40
SPAC13C5.01c ||SPAC31A2.17c|20S proteasome component alpha 3|Sch... 156 4e-39
SPAC323.02c |||20S proteasome component alpha 5|Schizosaccharomy... 132 5e-32
SPCC1795.04c |||20S proteasome component alpha 7|Schizosaccharom... 113 3e-26
SPAC6G10.04c |||20S proteasome component alpha 6 subunit Pre5|Sc... 112 6e-26
SPBC646.16 |||20S proteasome component alpha 1|Schizosaccharomyc... 111 1e-25
SPAC23D3.07 |pup1||20S proteasome component beta 2|Schizosacchar... 34 0.019
SPBC21C3.01c |vps13a|vps1301, SPBC31F10.18c|chorein homolog|Schi... 32 0.10
SPAPB21F2.02 |||Dopey family protein|Schizosaccharomyces pombe|c... 29 0.55
SPCC1739.01 ||SPCC1906.05|zf-CCCH type zinc finger protein|Schiz... 27 3.9
SPCC1281.01 |ags1|mok1, SPCC338.01c, SPCC17A7.01|alpha-1,4-gluca... 26 5.1
SPBC3E7.08c |rad13||DNA repair nuclease Rad13|Schizosaccharomyce... 26 6.7
SPAPB1A11.01 ||SPAPB24D3.11|membrane transporter|Schizosaccharom... 26 6.7
SPAC4H3.14c |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 26 6.7
SPAC144.03 |ade2|min10, min3|adenylosuccinate synthetase Ade2|Sc... 25 8.9
SPBP4H10.09 |rsv1||transcription factor Rsv1 |Schizosaccharomyce... 25 8.9
>SPCC1442.06 |||20S proteasome component alpha 2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 245
Score = 265 bits (650), Expect = 4e-72
Identities = 135/203 (66%), Positives = 162/203 (79%), Gaps = 1/203 (0%)
Frame = -2
Query: 745 SERYSFSLTTFSPSGKLVQIEYALAAVAAGGTSVGIKASNGVVIATENKHKSILYDEHSV 566
+++Y+FSLTTFSP+GKLVQIEYAL AV AG TSVGIKA++GVV+ATE K S L S+
Sbjct: 2 TDKYAFSLTTFSPNGKLVQIEYALNAVNAGVTSVGIKATDGVVLATEKKPTSELAIGASL 61
Query: 565 NKVEMITGHIGMVYSGMGPDYRLLVTQARKMAQQ-YFLMYHEPIPTAQLVQRVATVMQEY 389
KV IT IGMVYSGMGPD+R+LV ++RK+AQ Y +Y+E PT LVQ +A+VMQE
Sbjct: 62 EKVCAITPDIGMVYSGMGPDFRVLVDKSRKVAQTTYKKIYNEYPPTKILVQEIASVMQES 121
Query: 388 TQSGGVRPFGVSLLICGWEEGRPYLFQCDPSGAYFAWKATAMGKNFNNGKTFLEKRYTED 209
TQSGGVRPFGVSLL+ G +E P L+Q DPSG YFAWKATA+GK+ KTFLEKRY ++
Sbjct: 122 TQSGGVRPFGVSLLVAGMDEKGPSLYQVDPSGTYFAWKATAIGKSSTAAKTFLEKRYNDE 181
Query: 208 LELDDAVHTAILTLKEGFEGQMT 140
LELDDAVHTAIL LKE FEG++T
Sbjct: 182 LELDDAVHTAILALKETFEGELT 204
>SPBC106.16 |||20S proteasome component alpha 4|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 259
Score = 159 bits (386), Expect = 4e-40
Identities = 76/194 (39%), Positives = 120/194 (61%), Gaps = 2/194 (1%)
Frame = -2
Query: 736 YSFSLTTFSPSGKLVQIEYALAAVAAGGTSVGIKASNGVVIATENKHKSILYDEHSVNKV 557
Y +L+ FSP G+L+Q+EY AV G T++ ++ + +VI E K+ L + + K+
Sbjct: 4 YDRALSVFSPDGRLLQVEYGQEAVRRGTTAIALRGNECIVIGVERKNVPKLQNVSNFQKI 63
Query: 556 EMITGHIGMVYSGMGPDYRLLVTQARKMAQQYFLMYHEPIPTAQLVQRVATVMQEYTQSG 377
M+ H+ + ++G+ D R+L+ +AR AQ + L +P+ L + VA V Q+YTQSG
Sbjct: 64 AMVDNHVCLAFAGLNADARILIDKARVEAQNHKLNLADPVSIEYLTRYVAGVQQKYTQSG 123
Query: 376 GVRPFGVSLLICGWEEG--RPYLFQCDPSGAYFAWKATAMGKNFNNGKTFLEKRYTEDLE 203
GVRPFGVS LI G++ G P ++Q +P+G Y AWKATA+G+ + +LEK + E L
Sbjct: 124 GVRPFGVSTLIAGFDVGDNTPRVYQTEPAGIYNAWKATAIGRASKAAREYLEKNWKEGLS 183
Query: 202 LDDAVHTAILTLKE 161
D+ +H A+ +L E
Sbjct: 184 RDETIHLAVSSLLE 197
>SPAC13C5.01c ||SPAC31A2.17c|20S proteasome component alpha
3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 248
Score = 156 bits (378), Expect = 4e-39
Identities = 79/197 (40%), Positives = 119/197 (60%), Gaps = 2/197 (1%)
Frame = -2
Query: 745 SERYSFSLTTFSPSGKLVQIEYALAAVAAGGTSVGIKASNGVVIATENKHKS-ILYDEHS 569
S Y T FSP G+L Q+EYAL A+ G ++GI A +G+V+A E K S +L E S
Sbjct: 2 SRSYDSRTTIFSPEGRLYQVEYALEAINHAGVALGIVAKDGIVLAAEKKVTSKLLEQEES 61
Query: 568 VNKVEMITGHIGMVYSGMGPDYRLLVTQARKMAQQYFLMYHEPIPTAQLVQRVATVMQEY 389
K+ I ++ +G+ D +L+ AR++ QQY ++E +P QLV+RV + Q Y
Sbjct: 62 AEKLYHIGDNMLCAVAGLTADANILINYARRVGQQYLQTFNEEMPCEQLVRRVCDLKQGY 121
Query: 388 TQSGGVRPFGVSLLICGWEEGRPY-LFQCDPSGAYFAWKATAMGKNFNNGKTFLEKRYTE 212
TQ GG+RPFGVS L GW+ R Y LFQ +PSG Y +W+A ++G N + ++ + + Y +
Sbjct: 122 TQYGGLRPFGVSFLYAGWDHIRGYQLFQSNPSGNYGSWQANSIGGNSTSVQSLMRQEYKD 181
Query: 211 DLELDDAVHTAILTLKE 161
D+ LD+A A+ L +
Sbjct: 182 DINLDEASAMAVKFLSK 198
>SPAC323.02c |||20S proteasome component alpha 5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 247
Score = 132 bits (319), Expect = 5e-32
Identities = 69/212 (32%), Positives = 110/212 (51%), Gaps = 6/212 (2%)
Frame = -2
Query: 751 MASERYSFSLTTFSPSGKLVQIEYALAAVAAGGTSVGIKASNGVVIATENKHKSILYDEH 572
M Y + TFSP G+L Q+EYA+ A+ G T++G+K + VV+ E + S L + H
Sbjct: 3 MTRSEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGVKTKDAVVLGVEKRLTSPLMESH 62
Query: 571 SVNKVEMITGHIGMVYSGMGPDYRLLVTQARKMAQQYFLMYHEPIPTAQLVQRVATVMQE 392
SV K+ I HIG SG+ D R ++ AR Q + Y EP Q + +
Sbjct: 63 SVEKLFEIDSHIGCAISGLTADARTIIEHARVQTQNHRFTYDEPQGIESTTQSICDLALR 122
Query: 391 YTQSGG------VRPFGVSLLICGWEEGRPYLFQCDPSGAYFAWKATAMGKNFNNGKTFL 230
+ + RPFGV+LLI G +E P L+ +PSG YF ++A A+G K+ L
Sbjct: 123 FGEGEDGEERIMSRPFGVALLIAGIDEHGPQLYHSEPSGTYFRYEAKAIGSGSEPAKSEL 182
Query: 229 EKRYTEDLELDDAVHTAILTLKEGFEGQMTAR 134
K + +D+ L++A + L++ E ++ ++
Sbjct: 183 VKEFHKDMTLEEAEVLILKVLRQVMEEKLDSK 214
>SPCC1795.04c |||20S proteasome component alpha
7|Schizosaccharomyces pombe|chr 3|||Manual
Length = 253
Score = 113 bits (272), Expect = 3e-26
Identities = 61/179 (34%), Positives = 91/179 (50%)
Frame = -2
Query: 715 FSPSGKLVQIEYALAAVAAGGTSVGIKASNGVVIATENKHKSILYDEHSVNKVEMITGHI 536
FSP G+L Q EYA AV T +GIK +GV++A E S L N++ + HI
Sbjct: 14 FSPDGRLFQAEYAYKAVENASTCIGIKCEDGVILALEKVVTSKLLKPRVNNRIGSVDRHI 73
Query: 535 GMVYSGMGPDYRLLVTQARKMAQQYFLMYHEPIPTAQLVQRVATVMQEYTQSGGVRPFGV 356
G+ +G PD + +V +AR A + Y PIP + R+ +Q +T VRPFGV
Sbjct: 74 GIATTGFIPDGQHIVKRARDEATSWRDNYGSPIPGTVIADRLGNYVQLFTCYSSVRPFGV 133
Query: 355 SLLICGWEEGRPYLFQCDPSGAYFAWKATAMGKNFNNGKTFLEKRYTEDLELDDAVHTA 179
+ ++ P+L+ +P+G Y+ + A GK + LEK L++ DAV A
Sbjct: 134 MSFVATYDSEGPHLYMVEPNGVYWGYNGAAAGKGRQVARNELEKLNFSSLKMKDAVKEA 192
>SPAC6G10.04c |||20S proteasome component alpha 6 subunit
Pre5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 272
Score = 112 bits (269), Expect = 6e-26
Identities = 60/199 (30%), Positives = 103/199 (51%), Gaps = 2/199 (1%)
Frame = -2
Query: 751 MASERYSFSLTTFSPSGKLVQIEYALAAVAAGGTSVGIKASNGVVIATENKHKSILYDEH 572
M +Y TT+SP G+L Q+EYAL A+ G +VG+ + V+ ++ L
Sbjct: 1 MFRNQYDGDATTWSPQGRLHQVEYALEAIKQGSATVGLVSKTHAVLVALKRNAEELSSYQ 60
Query: 571 SVNKVEMITGHIGMVYSGMGPDYRLLVTQARKMAQQYFLMYHEPIPTAQLVQRVATVMQE 392
K+ I HIG+ +G+ PD R+L ++ A ++ PIP +L+ +VA Q
Sbjct: 61 K--KLIRIDDHIGIAIAGLAPDARVLSNYMKQEALSSKTLFTRPIPVRRLMSKVAEKAQI 118
Query: 391 YTQSGGVRPFGVSLLICGWEEGRPYLFQCDPSGAYFAWKATAMGKNFNNGKTFLEKRYT- 215
TQ G RP+GV L+ G++E P+L + PSG + T+MG + +T++E+
Sbjct: 119 NTQEYGRRPYGVGFLVIGYDESGPHLLEFQPSGLVLEYLGTSMGSRSQSARTYIERNLDT 178
Query: 214 -EDLELDDAVHTAILTLKE 161
D ++ + +A+ L++
Sbjct: 179 FPDSSREELILSALRALRD 197
>SPBC646.16 |||20S proteasome component alpha 1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 244
Score = 111 bits (267), Expect = 1e-25
Identities = 71/192 (36%), Positives = 101/192 (52%), Gaps = 5/192 (2%)
Frame = -2
Query: 727 SLTTFSPSGKLVQIEYALAAVA-AGGTSVGIKASNGVVIATENKHKSILYDEHSVNKVEM 551
++T FSP G+L Q+EYA A AG TSVG+ N + ++ K L D +V V
Sbjct: 10 TITVFSPEGRLYQVEYAFKAFNNAGITSVGVTGKNCACVISQKKVPDKLIDASTVKHVFP 69
Query: 550 ITGHIGMVYSGMGPDYRLLVTQARKMAQQYFLMYHEPIPTAQLVQRVATVMQEYTQSGGV 371
IT IG V +G D R V++AR A ++ P+P L +R+A + Q TQ +
Sbjct: 70 ITKGIGCVMTGSIADARAQVSRARSEAAEFEYKNGYPMPCDVLAKRMANIAQVSTQRAAM 129
Query: 370 RPFGVSL-LICGWEEGRPYLFQCDPSGAYFAWKATAMGKNFNNGKTFLEKRYTED---LE 203
RP GV++ L+ +E P LF+ DP+G Y +KAT+ G +LEKR+ +D
Sbjct: 130 RPLGVAMTLVAVDDEIGPSLFKLDPAGFYIGYKATSAGPKQTETINWLEKRFKKDGIPSN 189
Query: 202 LDDAVHTAILTL 167
L D V T I L
Sbjct: 190 LTDTVETGIQAL 201
>SPAC23D3.07 |pup1||20S proteasome component beta
2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 267
Score = 34.3 bits (75), Expect = 0.019
Identities = 37/173 (21%), Positives = 75/173 (43%), Gaps = 2/173 (1%)
Frame = -2
Query: 670 AVAAGGTSVGIKASNGVVIATENKHKS--ILYDEHSVNKVEMITGHIGMVYSGMGPDYRL 497
A + G T VG+ A + +V+ + + + I+ D++ K+ +I+ +I +G D
Sbjct: 31 ATSTGTTIVGVIAKDCIVLGADTRATAGPIIADKNC-KKLHLISPNIWCAGAGTAADTEF 89
Query: 496 LVTQARKMAQQYFLMYHEPIPTAQLVQRVATVMQEYTQSGGVRPFGVSLLICGWEEGRPY 317
+ + + + L Y P ++V + + Q + G G L++ G++ P+
Sbjct: 90 VTSMISSNIELHSL-YTNRKP--RVVTALTMLKQHLFRYQG--HIGAYLVLGGYDCKGPH 144
Query: 316 LFQCDPSGAYFAWKATAMGKNFNNGKTFLEKRYTEDLELDDAVHTAILTLKEG 158
LF G+ A+G + LE +Y DLE +A+ ++ G
Sbjct: 145 LFTIAAHGSSDKLPYVALGSGSLAAISVLETKYQPDLERHEAMELVKEAIEAG 197
>SPBC21C3.01c |vps13a|vps1301, SPBC31F10.18c|chorein
homolog|Schizosaccharomyces pombe|chr 2|||Manual
Length = 3071
Score = 31.9 bits (69), Expect = 0.10
Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
Frame = -2
Query: 583 YDEHSVNKVEMITG----HIGMVYSGMGPDYRLLVTQARKMAQQYFLMYHEPIPTAQLVQ 416
Y +H+VNK+++IT V D+ L T RK+ Y+ +Y P +L++
Sbjct: 1589 YSQHTVNKIQIITNITLDFDSFVLRTTVNDFLFLQTILRKIYNFYYALYDVPTTDVELLK 1648
Query: 415 R 413
R
Sbjct: 1649 R 1649
>SPAPB21F2.02 |||Dopey family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1687
Score = 29.5 bits (63), Expect = 0.55
Identities = 9/20 (45%), Positives = 15/20 (75%)
Frame = +3
Query: 531 MPMWPVIISTLLTLCSSYSM 590
+P+WP+++S LL + SY M
Sbjct: 1508 LPLWPIVVSELLIIFKSYCM 1527
>SPCC1739.01 ||SPCC1906.05|zf-CCCH type zinc finger
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 547
Score = 26.6 bits (56), Expect = 3.9
Identities = 13/41 (31%), Positives = 19/41 (46%)
Frame = +3
Query: 543 PVIISTLLTLCSSYSMLLCLFSVAITTPFDALMPTEVPPAA 665
P +++T CSS L L + P A +P + PP A
Sbjct: 265 PTLLNTYGNRCSSTDTLSSLSRLTSQDPLKASLPLQSPPLA 305
>SPCC1281.01 |ags1|mok1, SPCC338.01c, SPCC17A7.01|alpha-1,4-glucan
synthase Ags1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 2410
Score = 26.2 bits (55), Expect = 5.1
Identities = 7/30 (23%), Positives = 18/30 (60%)
Frame = +3
Query: 537 MWPVIISTLLTLCSSYSMLLCLFSVAITTP 626
+W +++ L + ++S ++C+F V + P
Sbjct: 2245 LWALLLGVLAWISRTHSWIICVFGVGLGAP 2274
>SPBC3E7.08c |rad13||DNA repair nuclease Rad13|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1112
Score = 25.8 bits (54), Expect = 6.7
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = +1
Query: 472 PSSLLESPVNDSLDPFPSKPCQCGQ 546
PS+ E ND +DP P +P G+
Sbjct: 491 PSASREKKTNDLIDPLPFQPMDWGK 515
>SPAPB1A11.01 ||SPAPB24D3.11|membrane
transporter|Schizosaccharomyces pombe|chr 1|||Manual
Length = 495
Score = 25.8 bits (54), Expect = 6.7
Identities = 8/29 (27%), Positives = 17/29 (58%)
Frame = +3
Query: 540 WPVIISTLLTLCSSYSMLLCLFSVAITTP 626
WP+ I + T+ S+ +LC++ ++ P
Sbjct: 33 WPIRIRIINTIIISFMTMLCMYGSSVFMP 61
>SPAC4H3.14c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 345
Score = 25.8 bits (54), Expect = 6.7
Identities = 13/44 (29%), Positives = 21/44 (47%)
Frame = -2
Query: 607 ENKHKSILYDEHSVNKVEMITGHIGMVYSGMGPDYRLLVTQARK 476
EN+ + + + N +E +T HI Y G G + T +RK
Sbjct: 21 ENRKEEVSTLQDMANDLEKLTDHIEATYIGRGVPHDHAKTGSRK 64
>SPAC144.03 |ade2|min10, min3|adenylosuccinate synthetase
Ade2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 434
Score = 25.4 bits (53), Expect = 8.9
Identities = 22/89 (24%), Positives = 43/89 (48%), Gaps = 4/89 (4%)
Frame = -2
Query: 643 GIKASNGVVIATENKHKSILYDEH----SVNKVEMITGHIGMVYSGMGPDYRLLVTQARK 476
G+K + + I+ + H +++D H ++N+ E+ IG G+GP Y T+A +
Sbjct: 103 GLKCRDRIFIS-DRAH--LVFDYHQRADALNEAELGKQSIGTTGKGIGPAYS---TKATR 156
Query: 475 MAQQYFLMYHEPIPTAQLVQRVATVMQEY 389
+ +YH A+ + VA + + Y
Sbjct: 157 SGIRVHHLYHWAEFEARYRKNVADLQKRY 185
>SPBP4H10.09 |rsv1||transcription factor Rsv1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 428
Score = 25.4 bits (53), Expect = 8.9
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +1
Query: 640 CRRKYHRRLRQLKHIR 687
C+R +HR+ Q++HIR
Sbjct: 9 CKRVFHRQEHQVRHIR 24
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,291,754
Number of Sequences: 5004
Number of extensions: 69669
Number of successful extensions: 187
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 178
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 179
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 365309308
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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