Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_pT_I08
         (605 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_P91868 Cluster: Putative uncharacterized protein gei-11...    33   5.2  
UniRef50_Q55G25 Cluster: Putative uncharacterized protein; n=1; ...    32   9.2  

>UniRef50_P91868 Cluster: Putative uncharacterized protein gei-11;
           n=3; Caenorhabditis|Rep: Putative uncharacterized
           protein gei-11 - Caenorhabditis elegans
          Length = 944

 Score = 33.1 bits (72), Expect = 5.2
 Identities = 23/71 (32%), Positives = 34/71 (47%), Gaps = 3/71 (4%)
 Frame = +1

Query: 190 MRIAISDRFVNRNLY--FDISRYTILLDMMRIGISFRFVNISNIRLVR-IESARVSERTI 360
           M I +SD   N   Y  F     +ILL+ MR+GI+    +    RLVR +   R  +   
Sbjct: 770 MHIGLSDEVTNSKEYANFYARMRSILLEPMRLGIARESSSDETKRLVRCLAEERACDEEQ 829

Query: 361 GISCDE*NRNR 393
            ++CD+  R R
Sbjct: 830 QVTCDQIRRRR 840


>UniRef50_Q55G25 Cluster: Putative uncharacterized protein; n=1;
           Dictyostelium discoideum AX4|Rep: Putative
           uncharacterized protein - Dictyostelium discoideum AX4
          Length = 831

 Score = 32.3 bits (70), Expect = 9.2
 Identities = 18/64 (28%), Positives = 34/64 (53%)
 Frame = -1

Query: 368 DIPIVRSLTLADSIRTKRILLILTNRNDMPMRIISSNIVYRLISKYRFRFTNRSDMAMRI 189
           D P++++L   D IR  R+LLI     D  ++ I S   Y+  ++ +F F N +++    
Sbjct: 106 DFPLLKTL---DIIRNNRMLLIKNRSLDYQLKYIQSIYNYKYGNRKKFNFNNNNNINNNN 162

Query: 188 TSSN 177
            ++N
Sbjct: 163 NNNN 166


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 530,525,488
Number of Sequences: 1657284
Number of extensions: 10405929
Number of successful extensions: 21485
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 20592
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21451
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 43147568152
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)