Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_pT_I02
         (454 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    25   0.44 
AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory recept...    25   0.44 
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    23   1.3  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    22   3.1  

>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 24.6 bits (51), Expect = 0.44
 Identities = 14/37 (37%), Positives = 18/37 (48%)
 Frame = +3

Query: 336 VGVIAGPGDGHKGKDNDELHEHFSSYCRDYVNVTCGQ 446
           V V   PGD      N +L E FSSY R    ++ G+
Sbjct: 401 VPVYIRPGDTPLEDINPDLAEAFSSYARKNARLSFGR 437


>AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory receptor
           candidate 25 protein.
          Length = 314

 Score = 24.6 bits (51), Expect = 0.44
 Identities = 14/37 (37%), Positives = 18/37 (48%)
 Frame = +3

Query: 336 VGVIAGPGDGHKGKDNDELHEHFSSYCRDYVNVTCGQ 446
           V V   PGD      N +L E FSSY R    ++ G+
Sbjct: 226 VPVYIRPGDTPLEDINPDLAEAFSSYARKNARLSFGR 262


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 23.0 bits (47), Expect = 1.3
 Identities = 13/34 (38%), Positives = 16/34 (47%)
 Frame = +3

Query: 201 GGVVDRPASTVRLQQRVLTLHVVSQTALHLVLEV 302
           G  VD   S    Q  ++T H+ SQ  LH V  V
Sbjct: 361 GETVDLFNSLFGYQTLLITFHIGSQLVLHTVKTV 394



 Score = 20.2 bits (40), Expect = 9.4
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +3

Query: 177 HSVEAFSSGGVVD 215
           H+V  FS+GG  D
Sbjct: 730 HNVRTFSAGGFFD 742


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 21.8 bits (44), Expect = 3.1
 Identities = 12/35 (34%), Positives = 17/35 (48%), Gaps = 3/35 (8%)
 Frame = +3

Query: 342 VIAGPGD---GHKGKDNDELHEHFSSYCRDYVNVT 437
           VI G  D   GH   DNDE+ +       D +++T
Sbjct: 326 VICGESDIFNGHLNPDNDEVLQVLEDIYSDLLDLT 360


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 79,022
Number of Sequences: 336
Number of extensions: 1316
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10301074
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)