Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_pT_I02
         (454 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M55210-1|AAA59492.1| 1609|Homo sapiens laminin B2 chain protein.       29   7.4  
J03202-1|AAA59488.1| 1609|Homo sapiens LAMB2 protein.                  29   7.4  
AL450304-5|CAI14877.1| 1609|Homo sapiens laminin, gamma 1 (forme...    29   7.4  
AL354953-3|CAH70981.1| 1609|Homo sapiens laminin, gamma 1 (forme...    29   7.4  
AJ288083-1|CAB93851.1|  355|Homo sapiens galectin-9 protein.           29   9.8  

>M55210-1|AAA59492.1| 1609|Homo sapiens laminin B2 chain protein.
          Length = 1609

 Score = 29.1 bits (62), Expect = 7.4
 Identities = 16/37 (43%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
 Frame = +2

Query: 221  CEYRQTPAASTDPSRCLP-DGSPPGS*SRQCKDPRRC 328
            CE  +       P  C P D  P GS S QCKD  RC
Sbjct: 965  CERCEVNHFGFGPEGCKPCDCHPEGSLSLQCKDDGRC 1001


>J03202-1|AAA59488.1| 1609|Homo sapiens LAMB2 protein.
          Length = 1609

 Score = 29.1 bits (62), Expect = 7.4
 Identities = 16/37 (43%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
 Frame = +2

Query: 221  CEYRQTPAASTDPSRCLP-DGSPPGS*SRQCKDPRRC 328
            CE  +       P  C P D  P GS S QCKD  RC
Sbjct: 965  CERCEVNHFGFGPEGCKPCDCHPEGSLSLQCKDDGRC 1001


>AL450304-5|CAI14877.1| 1609|Homo sapiens laminin, gamma 1 (formerly
            LAMB2) protein.
          Length = 1609

 Score = 29.1 bits (62), Expect = 7.4
 Identities = 16/37 (43%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
 Frame = +2

Query: 221  CEYRQTPAASTDPSRCLP-DGSPPGS*SRQCKDPRRC 328
            CE  +       P  C P D  P GS S QCKD  RC
Sbjct: 965  CERCEVNHFGFGPEGCKPCDCHPEGSLSLQCKDDGRC 1001


>AL354953-3|CAH70981.1| 1609|Homo sapiens laminin, gamma 1 (formerly
            LAMB2) protein.
          Length = 1609

 Score = 29.1 bits (62), Expect = 7.4
 Identities = 16/37 (43%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
 Frame = +2

Query: 221  CEYRQTPAASTDPSRCLP-DGSPPGS*SRQCKDPRRC 328
            CE  +       P  C P D  P GS S QCKD  RC
Sbjct: 965  CERCEVNHFGFGPEGCKPCDCHPEGSLSLQCKDDGRC 1001


>AJ288083-1|CAB93851.1|  355|Homo sapiens galectin-9 protein.
          Length = 355

 Score = 28.7 bits (61), Expect = 9.8
 Identities = 17/55 (30%), Positives = 27/55 (49%)
 Frame = -3

Query: 326 SVADPYTGDFKNQVESRLGDNVKGQYSLLESDGTRRTVDYAAGAEGFNAVVRKDP 162
           S A P++G  +  ++  L   V G  ++L S GTR  VD+  G  G +     +P
Sbjct: 12  SPAVPFSGTIQGGLQDGLQITVNG--TVLSSSGTRFAVDFQTGFSGNDIAFHFNP 64


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 51,763,707
Number of Sequences: 237096
Number of extensions: 889770
Number of successful extensions: 3477
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 3415
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3477
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3758237868
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)