Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P17_pT_H22
(678 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF025462-3|AAB71002.1| 309|Caenorhabditis elegans Hypothetical ... 110 8e-25
L16622-2|ABB51199.1| 246|Caenorhabditis elegans Hypothetical pr... 92 3e-19
L16622-1|ABB51198.1| 537|Caenorhabditis elegans Hypothetical pr... 92 3e-19
L16622-3|ABC71837.1| 254|Caenorhabditis elegans Hypothetical pr... 89 3e-18
Z93377-6|CAB07572.2| 254|Caenorhabditis elegans Hypothetical pr... 87 8e-18
L23651-11|AAA27959.1| 250|Caenorhabditis elegans Hypothetical p... 71 6e-13
Z66560-1|CAA91449.1| 214|Caenorhabditis elegans Hypothetical pr... 44 8e-05
AC006804-5|AAF60754.1| 213|Caenorhabditis elegans Hypothetical ... 37 0.012
AC024200-13|AAF36004.1| 214|Caenorhabditis elegans Glutathione ... 36 0.035
Z75536-2|CAA99830.2| 4171|Caenorhabditis elegans Hypothetical pr... 30 1.7
AF003139-4|ABJ99065.1| 78|Caenorhabditis elegans Hypothetical ... 29 3.0
AC024751-10|AAY55884.1| 654|Caenorhabditis elegans Hypothetical... 28 5.3
Z68221-3|CAA92495.1| 1249|Caenorhabditis elegans Hypothetical pr... 28 7.0
Z68221-2|CAD59229.1| 1228|Caenorhabditis elegans Hypothetical pr... 28 7.0
Z68221-1|CAB61039.2| 1252|Caenorhabditis elegans Hypothetical pr... 28 7.0
AY438645-1|AAR00672.1| 1249|Caenorhabditis elegans membrane Calc... 28 7.0
AY438644-1|AAR00671.1| 1252|Caenorhabditis elegans membrane Calc... 28 7.0
AJ223616-1|CAA11491.1| 1228|Caenorhabditis elegans calcium ATPas... 28 7.0
AF039052-7|AAO91672.2| 462|Caenorhabditis elegans Hypothetical ... 28 7.0
AF039052-6|AAF98635.2| 534|Caenorhabditis elegans Hypothetical ... 28 7.0
Z72502-11|CAH19081.1| 484|Caenorhabditis elegans Hypothetical p... 27 9.3
Z72502-10|CAA96587.1| 447|Caenorhabditis elegans Hypothetical p... 27 9.3
U49830-13|AAK31474.1| 826|Caenorhabditis elegans Hypothetical p... 27 9.3
AL132948-12|CAD31814.1| 283|Caenorhabditis elegans Hypothetical... 27 9.3
>AF025462-3|AAB71002.1| 309|Caenorhabditis elegans Hypothetical
protein K10F12.4a protein.
Length = 309
Score = 110 bits (265), Expect = 8e-25
Identities = 67/183 (36%), Positives = 97/183 (53%), Gaps = 4/183 (2%)
Frame = -3
Query: 673 LNXKNIPYDLVFINLDQKPEWIFNFSPKGTVPALEYEPGKALFDSNIINVYLDEKYPEIP 494
L KNIP ++V +N D+ P W SP G VPALE GK +++SN+I YLDE +P
Sbjct: 117 LAKKNIPVEVVNVNPDRSPNWYLPKSPIGRVPALEIN-GKVVWESNVIVEYLDELFPTNT 175
Query: 493 LQASDPLRRAQDKILVESFAPAQSA---YYTAAFNAQALEPSMVETYHKGLEGLQKELET 323
+ D +A KILVE +P +A +Y ++ N QA + + H L + L
Sbjct: 176 ILPRDAYEKAHQKILVERLSPIMNALFEFYGSSNNPQAQRQNDMNV-HSALRNSENLL-- 232
Query: 322 RSTKYLHGDEPGWVDYTLWPFLERFEALPLIGKAEFA-IDKTKYERLVTYIEAMKNVPAV 146
R T Y G +PG+ DY +WPFLER + L + ++F Y ++ YI M+N P V
Sbjct: 233 RDTFY-GGRQPGYADYLMWPFLERLQLLTMSPNSQFRYFPGLHYPKIGAYIARMQNQPEV 291
Query: 145 KSY 137
+
Sbjct: 292 LGF 294
>L16622-2|ABB51199.1| 246|Caenorhabditis elegans Hypothetical
protein C02D5.3b protein.
Length = 246
Score = 92.3 bits (219), Expect = 3e-19
Identities = 58/205 (28%), Positives = 100/205 (48%), Gaps = 7/205 (3%)
Frame = -3
Query: 664 KNIPYDLVFINLDQKPEWIFNFSPKGTVPALEYEPGKA-LFDSNIINVYLDEKYPEIPLQ 488
KNIP D++ ++L +KP+W F+ KG VP LE++ GK + +S +I YLD+ YPE +
Sbjct: 40 KNIPSDVINVHLQEKPDWYFSKHYKGQVPTLEHDEGKKHVIESAVIPEYLDDIYPETRIL 99
Query: 487 ASDPLRRAQDKILVESFAPAQSAYYTAAFNAQALEPSMVETYHKGLEGLQKELETRSTK- 311
+DP + Q K+L++ + S + A P + E ++ E T
Sbjct: 100 PTDPYEKVQQKLLLDRISGQVSPAFYGVVQA-VKNPDLREEKFADIKKAYDNAEQLLTGD 158
Query: 310 -YLHGDEPGWVDYTLWPFLER-FEALPLIGKAEFAIDK---TKYERLVTYIEAMKNVPAV 146
Y +PG+VDY L+P ++R + A ++ + Y RL + +A++++P V
Sbjct: 159 FYSGTSKPGFVDYLLYPNIQRAYWAAHIVPDFPLEAESFPGPNYPRLSKWYKALESIPEV 218
Query: 145 KSYFLAAETHAKFIESRAKGDANYN 71
+ E F + G NY+
Sbjct: 219 AAASQPTENGVGFFKDYLGGSPNYD 243
>L16622-1|ABB51198.1| 537|Caenorhabditis elegans Hypothetical
protein C02D5.3a protein.
Length = 537
Score = 92.3 bits (219), Expect = 3e-19
Identities = 58/205 (28%), Positives = 100/205 (48%), Gaps = 7/205 (3%)
Frame = -3
Query: 664 KNIPYDLVFINLDQKPEWIFNFSPKGTVPALEYEPGKA-LFDSNIINVYLDEKYPEIPLQ 488
KNIP D++ ++L +KP+W F+ KG VP LE++ GK + +S +I YLD+ YPE +
Sbjct: 40 KNIPSDVINVHLQEKPDWYFSKHYKGQVPTLEHDEGKKHVIESAVIPEYLDDIYPETRIL 99
Query: 487 ASDPLRRAQDKILVESFAPAQSAYYTAAFNAQALEPSMVETYHKGLEGLQKELETRSTK- 311
+DP + Q K+L++ + S + A P + E ++ E T
Sbjct: 100 PTDPYEKVQQKLLLDRISGQVSPAFYGVVQA-VKNPDLREEKFADIKKAYDNAEQLLTGD 158
Query: 310 -YLHGDEPGWVDYTLWPFLER-FEALPLIGKAEFAIDK---TKYERLVTYIEAMKNVPAV 146
Y +PG+VDY L+P ++R + A ++ + Y RL + +A++++P V
Sbjct: 159 FYSGTSKPGFVDYLLYPNIQRAYWAAHIVPDFPLEAESFPGPNYPRLSKWYKALESIPEV 218
Query: 145 KSYFLAAETHAKFIESRAKGDANYN 71
+ E F + G NY+
Sbjct: 219 AAASQPTENGVGFFKDYLGGSPNYD 243
Score = 89.0 bits (211), Expect = 3e-18
Identities = 56/204 (27%), Positives = 102/204 (50%), Gaps = 6/204 (2%)
Frame = -3
Query: 664 KNIPYDLVFINLDQKPEWIFNFSPKGTVPALEYEPGKAL-FDSNIINVYLDEKYPEIPLQ 488
K IP +++ I+LDQKP+W F KG VPALE++ GK + +S +I YLD+ YPE +
Sbjct: 331 KKIPTEVINIHLDQKPDWFFTKHYKGQVPALEHDEGKKIVIESAVIPEYLDDIYPEPRII 390
Query: 487 ASDPLRRAQDKILVESFAPAQSAYYTAAFNAQALEPSMVETYHKGLEGLQKELETRSTKY 308
+D + Q K+L++ + S+ + A + + E + + E + +
Sbjct: 391 PTDHYEKVQQKLLLDRISGQLSSAFYGVVQAAKISDLLKEKLVELAKAYDTAEELLTGDF 450
Query: 307 LHG-DEPGWVDYTLWPFLER-FEALPLIGKAEFAIDK---TKYERLVTYIEAMKNVPAVK 143
G +PG+VDY ++P ++R F +I ++ Y +L + + + ++P V
Sbjct: 451 YSGTSKPGFVDYLIYPNIQRAFWTSHIIKDFPLKVESFPGPNYPKLSKWYKRLDSIPEVI 510
Query: 142 SYFLAAETHAKFIESRAKGDANYN 71
+ ET +F +S G N++
Sbjct: 511 ATSQPTETAVEFFKSWIIGAPNFD 534
>L16622-3|ABC71837.1| 254|Caenorhabditis elegans Hypothetical
protein C02D5.3c protein.
Length = 254
Score = 89.0 bits (211), Expect = 3e-18
Identities = 56/204 (27%), Positives = 102/204 (50%), Gaps = 6/204 (2%)
Frame = -3
Query: 664 KNIPYDLVFINLDQKPEWIFNFSPKGTVPALEYEPGKAL-FDSNIINVYLDEKYPEIPLQ 488
K IP +++ I+LDQKP+W F KG VPALE++ GK + +S +I YLD+ YPE +
Sbjct: 48 KKIPTEVINIHLDQKPDWFFTKHYKGQVPALEHDEGKKIVIESAVIPEYLDDIYPEPRII 107
Query: 487 ASDPLRRAQDKILVESFAPAQSAYYTAAFNAQALEPSMVETYHKGLEGLQKELETRSTKY 308
+D + Q K+L++ + S+ + A + + E + + E + +
Sbjct: 108 PTDHYEKVQQKLLLDRISGQLSSAFYGVVQAAKISDLLKEKLVELAKAYDTAEELLTGDF 167
Query: 307 LHG-DEPGWVDYTLWPFLER-FEALPLIGKAEFAIDK---TKYERLVTYIEAMKNVPAVK 143
G +PG+VDY ++P ++R F +I ++ Y +L + + + ++P V
Sbjct: 168 YSGTSKPGFVDYLIYPNIQRAFWTSHIIKDFPLKVESFPGPNYPKLSKWYKRLDSIPEVI 227
Query: 142 SYFLAAETHAKFIESRAKGDANYN 71
+ ET +F +S G N++
Sbjct: 228 ATSQPTETAVEFFKSWIIGAPNFD 251
>Z93377-6|CAB07572.2| 254|Caenorhabditis elegans Hypothetical
protein F13A7.10 protein.
Length = 254
Score = 87.4 bits (207), Expect = 8e-18
Identities = 47/140 (33%), Positives = 73/140 (52%), Gaps = 2/140 (1%)
Frame = -3
Query: 664 KNIPYDLVFINLDQKPEWIFNFSPKGTVPALEYEPGKAL-FDSNIINVYLDEKYPEIPLQ 488
K IP +++ INL QKP+W F + KG VP LE+ GK L +S +I YLD+ +PE +
Sbjct: 48 KKIPSEVININLQQKPDWYFTKNYKGQVPTLEHAEGKKLVIESAVIPEYLDDIFPETKIL 107
Query: 487 ASDPLRRAQDKILVESFAPAQSAYYTAAFNAQALEPSMVETYHKGLEGLQK-ELETRSTK 311
SDP + Q K+L+E + + + F A + E + L+ ++ E
Sbjct: 108 PSDPYEKVQQKLLLERLSDQLTPAFGRVFRAIKNPEELKEKFESILKAFEEAESLLEGAF 167
Query: 310 YLHGDEPGWVDYTLWPFLER 251
Y PG+VDY ++P +R
Sbjct: 168 YSGTSSPGFVDYLIYPSFQR 187
>L23651-11|AAA27959.1| 250|Caenorhabditis elegans Hypothetical
protein C29E4.7 protein.
Length = 250
Score = 71.3 bits (167), Expect = 6e-13
Identities = 52/205 (25%), Positives = 93/205 (45%), Gaps = 6/205 (2%)
Frame = -3
Query: 664 KNIPYDLVFINLDQKPEWIFNFSPKGTVPALEYEPGKALFDSNIINVYLDEKYPEIPLQA 485
K I ++V +N+ K EW + +G PA+E+ GK + +S I YLD+ +PE +
Sbjct: 46 KGIEAEVVNLNVTDKLEWYWTKHYQGKAPAVEHN-GKVVIESGFIPEYLDDAFPETRILP 104
Query: 484 SDPLRRAQDKILVESFAPAQSAYYTAAFNAQALEPSMVETYHKGLEGLQKELETRSTKYL 305
+DP + Q K+L + A F E K E L++ + +
Sbjct: 105 TDPYEKVQQKLLADRLTAVAHA-VPLLFAVMRDRTLKDEKQRKVFEVLKQAENLLANDFY 163
Query: 304 HGDEPGWVDYTLWPFLER-FEALPLIGKAEFAI----DKTKYERLVTYIEAMKNVPAVKS 140
G +PG+ DY +PF E+ + + L G + + +Y +L + + M + V+S
Sbjct: 164 AGSQPGYPDYLSFPFFEKIWWSASLDGVVDLPTIEFPGEEEYPKLTKWFQKMISSDVVQS 223
Query: 139 YFLAAETHAKFIESRA-KGDANYNM 68
+ E A F+ + A + NY++
Sbjct: 224 VTQSLEHGAAFMNAYATHQELNYDL 248
>Z66560-1|CAA91449.1| 214|Caenorhabditis elegans Hypothetical
protein D1053.1 protein.
Length = 214
Score = 44.4 bits (100), Expect = 8e-05
Identities = 41/152 (26%), Positives = 70/152 (46%), Gaps = 13/152 (8%)
Frame = -3
Query: 673 LNXKNIPYDLVFINL--DQKPEWIFNFSPKGTVPALEYEPGKALFDSNIINVYLDEKYPE 500
L KN+ Y+ ++L ++ + +P VP + G+ + +S I YL+E +P+
Sbjct: 24 LALKNVDYEYKTVDLLSEEAKSKLKEINPAAKVPTFVVD-GQVITESLAIIEYLEETHPD 82
Query: 499 IPLQASDPLRRAQDK---ILVES-FAPAQSAYY-------TAAFNAQALEPSMVETYHKG 353
+PL DP++RA + +LV S P + A F Q + +VE G
Sbjct: 83 VPLLPKDPIKRAHARAISLLVASGIQPLHNLKVLQLLNKKEAGFGGQFAKQFVVE----G 138
Query: 352 LEGLQKELETRSTKYLHGDEPGWVDYTLWPFL 257
L L+ L+ S KY GD+ D ++ P +
Sbjct: 139 LTALEILLKQHSGKYAVGDDVTIADLSIPPLI 170
>AC006804-5|AAF60754.1| 213|Caenorhabditis elegans Hypothetical
protein Y53G8B.1 protein.
Length = 213
Score = 37.1 bits (82), Expect = 0.012
Identities = 39/146 (26%), Positives = 63/146 (43%), Gaps = 11/146 (7%)
Frame = -3
Query: 673 LNXKNIPYDLVFINL--DQKPEWIFNFSPKGTVPALEYEPGKALFDSNIINVYLDEKYPE 500
L K I Y+ +NL QK + +P VP L+ G L +S I YLDE YP+
Sbjct: 23 LALKKIDYEYQPVNLLNKQKEQEFHGNNPAEKVPILKIN-GLTLTESMAIIEYLDEIYPD 81
Query: 499 IPLQASDPLRRAQDKI----LVESFAPAQSAYYTAAFNAQALEPSMVETY-----HKGLE 347
PL +P +A+ + + + P Q+ N + EP + + KG +
Sbjct: 82 PPLLPKEPELKARARAIAFHIASNIQPLQNKPIYLMLNEK--EPGYGDFWCQHFISKGFK 139
Query: 346 GLQKELETRSTKYLHGDEPGWVDYTL 269
L++ L+ S + G++ D L
Sbjct: 140 ALEELLQMHSGDFCVGNQISIADICL 165
>AC024200-13|AAF36004.1| 214|Caenorhabditis elegans Glutathione
s-transferase protein43 protein.
Length = 214
Score = 35.5 bits (78), Expect = 0.035
Identities = 38/138 (27%), Positives = 58/138 (42%), Gaps = 9/138 (6%)
Frame = -3
Query: 655 PYDLVFINLDQKPEWIFNFSPKGTVPALEYEPGKALFDSNIINVYLDEKYPEIPLQASDP 476
P DL E++ +P VP L G +L +S I YLDE YP+ P +
Sbjct: 33 PIDLFSEESKNNAEFV-KHNPAKKVPTLVIN-GLSLTESLAIIEYLDEAYPDPPFLPKEL 90
Query: 475 LRRAQDKI----LVESFAPAQSAYYTAAFNAQALEPSMVETY-----HKGLEGLQKELET 323
+R+ + +V S P Q+ N + EP + + +KG L++ L+
Sbjct: 91 DKRSYSRAIALHIVASIQPLQAINIHKMLNEK--EPGYGDFWCNHFVNKGFLALEELLKK 148
Query: 322 RSTKYLHGDEPGWVDYTL 269
S KY GD+ D L
Sbjct: 149 HSGKYCVGDQLTIADINL 166
>Z75536-2|CAA99830.2| 4171|Caenorhabditis elegans Hypothetical protein
F18C12.1 protein.
Length = 4171
Score = 29.9 bits (64), Expect = 1.7
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = -3
Query: 322 RSTKYLHGDEPGWVDYTLWPFLERFEALPLIGKAEFAIDK 203
++T+ LH D P W++ W L+ + + G FAI K
Sbjct: 2073 KTTEDLHADMPSWIEEHFWRCLKWVRSHKISGITSFAILK 2112
>AF003139-4|ABJ99065.1| 78|Caenorhabditis elegans Hypothetical
protein F53G12.13 protein.
Length = 78
Score = 29.1 bits (62), Expect = 3.0
Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 4/57 (7%)
Frame = -3
Query: 319 STKYLHG-DEPGWVDYTLWPFLERFEALPLIGKA---EFAIDKTKYERLVTYIEAMK 161
S KY +EP W+D + L +F+ PL +A +F D+T L+T++ MK
Sbjct: 11 SNKYFFDVNEPSWLDCKAFAVLAQFKYTPLQNEARVKQFMKDRT--PNLMTFVTRMK 65
>AC024751-10|AAY55884.1| 654|Caenorhabditis elegans Hypothetical
protein Y18H1A.15 protein.
Length = 654
Score = 28.3 bits (60), Expect = 5.3
Identities = 15/68 (22%), Positives = 28/68 (41%), Gaps = 4/68 (5%)
Frame = -3
Query: 280 DYTLWPFLERFEA----LPLIGKAEFAIDKTKYERLVTYIEAMKNVPAVKSYFLAAETHA 113
D++ P ER +P + K +FA+ + + R+ ++ N FL
Sbjct: 178 DHSFMPIKERLHRKLSYIPCLFKRDFAVTENERRRINWFLHDYANFTMFNKLFLKIPAKK 237
Query: 112 KFIESRAK 89
F+E + K
Sbjct: 238 SFVEGKCK 245
>Z68221-3|CAA92495.1| 1249|Caenorhabditis elegans Hypothetical
protein W09C2.3c protein.
Length = 1249
Score = 27.9 bits (59), Expect = 7.0
Identities = 12/27 (44%), Positives = 20/27 (74%)
Frame = -3
Query: 373 VETYHKGLEGLQKELETRSTKYLHGDE 293
+ T H+G+EGL K+L+T S L+G++
Sbjct: 59 LSTEHEGVEGLCKKLKTDSLVGLNGEQ 85
>Z68221-2|CAD59229.1| 1228|Caenorhabditis elegans Hypothetical
protein W09C2.3b protein.
Length = 1228
Score = 27.9 bits (59), Expect = 7.0
Identities = 12/27 (44%), Positives = 20/27 (74%)
Frame = -3
Query: 373 VETYHKGLEGLQKELETRSTKYLHGDE 293
+ T H+G+EGL K+L+T S L+G++
Sbjct: 38 LSTEHEGVEGLCKKLKTDSLVGLNGEQ 64
>Z68221-1|CAB61039.2| 1252|Caenorhabditis elegans Hypothetical
protein W09C2.3a protein.
Length = 1252
Score = 27.9 bits (59), Expect = 7.0
Identities = 12/27 (44%), Positives = 20/27 (74%)
Frame = -3
Query: 373 VETYHKGLEGLQKELETRSTKYLHGDE 293
+ T H+G+EGL K+L+T S L+G++
Sbjct: 62 LSTEHEGVEGLCKKLKTDSLVGLNGEQ 88
>AY438645-1|AAR00672.1| 1249|Caenorhabditis elegans membrane Calcium
ATPase (136.9kD) (mca-1) protein.
Length = 1249
Score = 27.9 bits (59), Expect = 7.0
Identities = 12/27 (44%), Positives = 20/27 (74%)
Frame = -3
Query: 373 VETYHKGLEGLQKELETRSTKYLHGDE 293
+ T H+G+EGL K+L+T S L+G++
Sbjct: 59 LSTEHEGVEGLCKKLKTDSLVGLNGEQ 85
>AY438644-1|AAR00671.1| 1252|Caenorhabditis elegans membrane Calcium
ATPase (136.6kD) (mca-1) protein.
Length = 1252
Score = 27.9 bits (59), Expect = 7.0
Identities = 12/27 (44%), Positives = 20/27 (74%)
Frame = -3
Query: 373 VETYHKGLEGLQKELETRSTKYLHGDE 293
+ T H+G+EGL K+L+T S L+G++
Sbjct: 62 LSTEHEGVEGLCKKLKTDSLVGLNGEQ 88
>AJ223616-1|CAA11491.1| 1228|Caenorhabditis elegans calcium ATPase
protein.
Length = 1228
Score = 27.9 bits (59), Expect = 7.0
Identities = 12/27 (44%), Positives = 20/27 (74%)
Frame = -3
Query: 373 VETYHKGLEGLQKELETRSTKYLHGDE 293
+ T H+G+EGL K+L+T S L+G++
Sbjct: 38 LSTEHEGVEGLCKKLKTDSLVGLNGEQ 64
>AF039052-7|AAO91672.2| 462|Caenorhabditis elegans Hypothetical
protein T22D1.3b protein.
Length = 462
Score = 27.9 bits (59), Expect = 7.0
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = -3
Query: 523 YLDEKYPEIPLQASDPLRRAQDKILVESFA 434
Y+ EK+P + + A + + RAQ K+L++ A
Sbjct: 307 YIKEKHPHVQVIAGNVVTRAQAKLLIDQGA 336
>AF039052-6|AAF98635.2| 534|Caenorhabditis elegans Hypothetical
protein T22D1.3a protein.
Length = 534
Score = 27.9 bits (59), Expect = 7.0
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = -3
Query: 523 YLDEKYPEIPLQASDPLRRAQDKILVESFA 434
Y+ EK+P + + A + + RAQ K+L++ A
Sbjct: 307 YIKEKHPHVQVIAGNVVTRAQAKLLIDQGA 336
>Z72502-11|CAH19081.1| 484|Caenorhabditis elegans Hypothetical
protein C08B6.4b protein.
Length = 484
Score = 27.5 bits (58), Expect = 9.3
Identities = 11/24 (45%), Positives = 16/24 (66%), Gaps = 2/24 (8%)
Frame = -3
Query: 676 TLNXKN--IPYDLVFINLDQKPEW 611
TL+ KN +P D +F NL +P+W
Sbjct: 395 TLSCKNMPVPLDQIFYNLSYQPDW 418
>Z72502-10|CAA96587.1| 447|Caenorhabditis elegans Hypothetical
protein C08B6.4a protein.
Length = 447
Score = 27.5 bits (58), Expect = 9.3
Identities = 11/24 (45%), Positives = 16/24 (66%), Gaps = 2/24 (8%)
Frame = -3
Query: 676 TLNXKN--IPYDLVFINLDQKPEW 611
TL+ KN +P D +F NL +P+W
Sbjct: 358 TLSCKNMPVPLDQIFYNLSYQPDW 381
>U49830-13|AAK31474.1| 826|Caenorhabditis elegans Hypothetical
protein C33F10.2 protein.
Length = 826
Score = 27.5 bits (58), Expect = 9.3
Identities = 17/43 (39%), Positives = 20/43 (46%)
Frame = +2
Query: 143 LHSRHIFHGFNVSNQSLIFSFVNGKLSFSNQGQSLKAL*KWPK 271
LH+R+I HGF N I N KLS G L L + K
Sbjct: 106 LHTRNIVHGFLHLNSIYITDRKNQKLSVKLSGYGLPFLTNYGK 148
>AL132948-12|CAD31814.1| 283|Caenorhabditis elegans Hypothetical
protein Y39B6A.16 protein.
Length = 283
Score = 27.5 bits (58), Expect = 9.3
Identities = 16/52 (30%), Positives = 28/52 (53%)
Frame = -3
Query: 577 ALEYEPGKALFDSNIINVYLDEKYPEIPLQASDPLRRAQDKILVESFAPAQS 422
+L+ ++L +++ V+ D Y E P+Q +AQ K E+ APA+S
Sbjct: 167 SLKVASSRSLETPSMMRVFSDSMY-ETPVQIQRRFTKAQAKAEAEAEAPAKS 217
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,184,966
Number of Sequences: 27780
Number of extensions: 309899
Number of successful extensions: 942
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 843
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 927
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1539654388
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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