Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_pT_H21
         (603 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC025723-5|AAK29936.2|  183|Caenorhabditis elegans Hypothetical ...    82   3e-16
Z81536-11|CAB04363.2|  295|Caenorhabditis elegans Hypothetical p...    34   0.090
AF039053-5|AAC25875.2|  293|Caenorhabditis elegans Serpentine re...    30   1.5  
U67947-1|AAB07557.2| 1147|Caenorhabditis elegans Hypothetical pr...    29   1.9  
U42833-6|AAA83581.1| 1650|Caenorhabditis elegans Hypothetical pr...    27   7.8  
U41108-2|AAQ23121.2|  639|Caenorhabditis elegans Tropomodulin pr...    27   7.8  
AL132859-4|CAB60492.1|  365|Caenorhabditis elegans Hypothetical ...    27   7.8  

>AC025723-5|AAK29936.2|  183|Caenorhabditis elegans Hypothetical
           protein Y54F10AM.5 protein.
          Length = 183

 Score = 81.8 bits (193), Expect = 3e-16
 Identities = 39/115 (33%), Positives = 60/115 (52%)
 Frame = -1

Query: 603 EYXLCRQEENDPRKCINEGKAVTACTLEFFRKVKKTCLAEFNQYSNCLDKSSGDYAFRHC 424
           E+ L R+E  DPR  + EG A+TAC + F + +K++CL +  + + C+D+SS       C
Sbjct: 45  EFMLRRKEAEDPRAVLKEGAALTACGVNFLQSLKRSCLPQTQKLAECVDQSSAKLYMSKC 104

Query: 423 RKTQGVFDQCMLEKLNLPRPGFGYFCEARVHDTKRPKPLPEPKAVYPDATPALPE 259
              Q   D C+   LNL RP  GYF +  V+D+    P  + +    +A   L E
Sbjct: 105 HDDQKELDACVEANLNLTRPKLGYFSKLHVYDSATAAPEVKLRDYKAEAAKVLNE 159


>Z81536-11|CAB04363.2|  295|Caenorhabditis elegans Hypothetical
           protein F40D4.7 protein.
          Length = 295

 Score = 33.9 bits (74), Expect = 0.090
 Identities = 12/33 (36%), Positives = 20/33 (60%)
 Frame = -1

Query: 600 YXLCRQEENDPRKCINEGKAVTACTLEFFRKVK 502
           Y +C  + N P  C+N G A+ +C  ++FR +K
Sbjct: 146 YVICNYQLNVPYNCVNVGCAMNSCFRQYFRPLK 178


>AF039053-5|AAC25875.2|  293|Caenorhabditis elegans Serpentine
           receptor, class bc (class b-like) protein 23 protein.
          Length = 293

 Score = 29.9 bits (64), Expect = 1.5
 Identities = 12/33 (36%), Positives = 17/33 (51%)
 Frame = -1

Query: 600 YXLCRQEENDPRKCINEGKAVTACTLEFFRKVK 502
           Y  C  E   PR C+  G ++ AC+  F+ K K
Sbjct: 146 YYFCNFELTFPRNCLTIGCSINACSSRFWTKSK 178


>U67947-1|AAB07557.2| 1147|Caenorhabditis elegans Hypothetical
           protein H03E18.1 protein.
          Length = 1147

 Score = 29.5 bits (63), Expect = 1.9
 Identities = 33/123 (26%), Positives = 49/123 (39%), Gaps = 7/123 (5%)
 Frame = -1

Query: 582 EENDPRKCINEGKAVTACTLEFFRKVKKTCLAEFNQYSNCLDKSS--GDYAFRHCRKTQG 409
           EE+D    +N+ + + A T     K  K    +F   +  L+K +  G Y     RKT  
Sbjct: 257 EEHDVDS-VNDCRCLCAATYLPNNKKNKCMSFQFRNKTCTLNKGNHLGQYDLIEQRKTLY 315

Query: 408 VFDQC----MLEKLNLPRPGFG-YFCEARVHDTKRPKPLPEPKAVYPDATPALPEDAEKK 244
            +  C    +LE  +   P F     E +  DTK+  P  +PK     A     E  E K
Sbjct: 316 QYVGCDPEILLETASSKCPNFKPKSAEKKKPDTKKETPTKKPKVELVTAKTVEGEKKETK 375

Query: 243 PPR 235
            P+
Sbjct: 376 KPK 378


>U42833-6|AAA83581.1| 1650|Caenorhabditis elegans Hypothetical protein
            ZK430.1 protein.
          Length = 1650

 Score = 27.5 bits (58), Expect = 7.8
 Identities = 14/44 (31%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
 Frame = -1

Query: 498  TCLAE-FNQYSNCLDKSSGDYAFRHCRKTQGVFDQCMLEKLNLP 370
            TC+   ++Q+++ + +S+GD   R+CR      D   L  LN P
Sbjct: 1226 TCIQRVYDQFASFVVESTGDVIIRYCRLIARFGDPSELLALNQP 1269


>U41108-2|AAQ23121.2|  639|Caenorhabditis elegans Tropomodulin
           protein 2, isoform b protein.
          Length = 639

 Score = 27.5 bits (58), Expect = 7.8
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = -1

Query: 318 PKPLPEPKAVYPDATPALPEDAEKKPPR 235
           PK  PEPK + P   PA+P+      P+
Sbjct: 273 PKKEPEPKKMAPKIPPAVPKSLVSPEPK 300


>AL132859-4|CAB60492.1|  365|Caenorhabditis elegans Hypothetical
           protein Y39C12A.8 protein.
          Length = 365

 Score = 27.5 bits (58), Expect = 7.8
 Identities = 15/46 (32%), Positives = 24/46 (52%)
 Frame = -2

Query: 341 LESTIPRDRSLYRSQRLSTRTPRQLYQKTPRRNHQGSAPVSTG*RN 204
           L++    + +LY+    +    +Q Y  T R+NH+ S P S G RN
Sbjct: 89  LQNAETSNENLYKRCNRNKNQRKQEYSNTQRQNHKKSEP-SNGKRN 133


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,963,402
Number of Sequences: 27780
Number of extensions: 233805
Number of successful extensions: 789
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 740
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 785
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1289949676
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)