Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P17_pT_H19
(756 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D64154-1|BAA11023.1| 407|Homo sapiens Mr 110,000 antigen protein. 57 6e-08
BC017245-1|AAH17245.1| 407|Homo sapiens adhesion regulating mol... 57 6e-08
BC010733-1|AAH10733.1| 296|Homo sapiens Unknown (protein for IM... 57 6e-08
AL354836-4|CAC22308.1| 407|Homo sapiens adhesion regulating mol... 57 6e-08
AF179681-1|AAF72107.1| 1156|Homo sapiens unknown protein. 34 0.48
AY364242-1|AAQ76801.1| 582|Homo sapiens hypothetical protein pr... 31 3.4
AL353796-1|CAH72262.1| 582|Homo sapiens novel protein protein. 31 3.4
AL161651-3|CAI14218.1| 582|Homo sapiens novel protein protein. 31 3.4
AK001348-1|BAA91641.1| 582|Homo sapiens protein ( Homo sapiens ... 31 3.4
AB194709-1|BAD98252.1| 582|Homo sapiens mitochondrial polyA pol... 31 3.4
BC061703-1|AAH61703.1| 582|Homo sapiens PAP associated domain c... 31 4.5
>D64154-1|BAA11023.1| 407|Homo sapiens Mr 110,000 antigen protein.
Length = 407
Score = 57.2 bits (132), Expect = 6e-08
Identities = 29/64 (45%), Positives = 40/64 (62%), Gaps = 2/64 (3%)
Frame = -3
Query: 715 SAPENAVRLAPHL--PAQDDAANQFSSAVGSGQMGPVMSQFGLPSEVSSAANTGNIEAVF 542
S P+ A + L P A FS+A+ SGQ+GP+M QFGLP+E AAN G++EA
Sbjct: 319 SLPQTADEIQNTLTSPQFQQALGMFSAALASGQLGPLMCQFGLPAEAVEAANKGDVEAFA 378
Query: 541 KALE 530
KA++
Sbjct: 379 KAMQ 382
>BC017245-1|AAH17245.1| 407|Homo sapiens adhesion regulating
molecule 1 protein.
Length = 407
Score = 57.2 bits (132), Expect = 6e-08
Identities = 29/64 (45%), Positives = 40/64 (62%), Gaps = 2/64 (3%)
Frame = -3
Query: 715 SAPENAVRLAPHL--PAQDDAANQFSSAVGSGQMGPVMSQFGLPSEVSSAANTGNIEAVF 542
S P+ A + L P A FS+A+ SGQ+GP+M QFGLP+E AAN G++EA
Sbjct: 319 SLPQTADEIQNTLTSPQFQQALGMFSAALASGQLGPLMCQFGLPAEAVEAANKGDVEAFA 378
Query: 541 KALE 530
KA++
Sbjct: 379 KAMQ 382
>BC010733-1|AAH10733.1| 296|Homo sapiens Unknown (protein for
IMAGE:3897044) protein.
Length = 296
Score = 57.2 bits (132), Expect = 6e-08
Identities = 29/64 (45%), Positives = 40/64 (62%), Gaps = 2/64 (3%)
Frame = -3
Query: 715 SAPENAVRLAPHL--PAQDDAANQFSSAVGSGQMGPVMSQFGLPSEVSSAANTGNIEAVF 542
S P+ A + L P A FS+A+ SGQ+GP+M QFGLP+E AAN G++EA
Sbjct: 208 SLPQTADEIQNTLTSPQFQQALGMFSAALASGQLGPLMCQFGLPAEAVEAANKGDVEAFA 267
Query: 541 KALE 530
KA++
Sbjct: 268 KAMQ 271
>AL354836-4|CAC22308.1| 407|Homo sapiens adhesion regulating
molecule 1 protein.
Length = 407
Score = 57.2 bits (132), Expect = 6e-08
Identities = 29/64 (45%), Positives = 40/64 (62%), Gaps = 2/64 (3%)
Frame = -3
Query: 715 SAPENAVRLAPHL--PAQDDAANQFSSAVGSGQMGPVMSQFGLPSEVSSAANTGNIEAVF 542
S P+ A + L P A FS+A+ SGQ+GP+M QFGLP+E AAN G++EA
Sbjct: 319 SLPQTADEIQNTLTSPQFQQALGMFSAALASGQLGPLMCQFGLPAEAVEAANKGDVEAFA 378
Query: 541 KALE 530
KA++
Sbjct: 379 KAMQ 382
>AF179681-1|AAF72107.1| 1156|Homo sapiens unknown protein.
Length = 1156
Score = 34.3 bits (75), Expect = 0.48
Identities = 18/49 (36%), Positives = 26/49 (53%)
Frame = +1
Query: 499 LSWYLTKKKCLPVP*RRLQCFPYLQQMRLPTVSRIVTLLAPSVRNPPLK 645
+ W L +K +P R F + +R+P SR+ TLL PS R P +K
Sbjct: 88 VGWGLAIRKTPMLPARNPPRFGHPSSVRIPPPSRMFTLLLPSPREPAVK 136
>AY364242-1|AAQ76801.1| 582|Homo sapiens hypothetical protein
protein.
Length = 582
Score = 31.5 bits (68), Expect = 3.4
Identities = 20/56 (35%), Positives = 31/56 (55%), Gaps = 5/56 (8%)
Frame = -1
Query: 591 RRKSHLLQIRETLKPS---SRHWK--TLLLRQVPRQKKTTKKRINLKTIKIVKKMM 439
R + +LQ +T +PS +R W +LLL P +K TKK+ N I+ VK ++
Sbjct: 503 RESAWILQQEDTDRPSISSNRPWGLVSLLLPSAPNRKSFTKKKSNKFAIETVKNLL 558
>AL353796-1|CAH72262.1| 582|Homo sapiens novel protein protein.
Length = 582
Score = 31.5 bits (68), Expect = 3.4
Identities = 20/56 (35%), Positives = 31/56 (55%), Gaps = 5/56 (8%)
Frame = -1
Query: 591 RRKSHLLQIRETLKPS---SRHWK--TLLLRQVPRQKKTTKKRINLKTIKIVKKMM 439
R + +LQ +T +PS +R W +LLL P +K TKK+ N I+ VK ++
Sbjct: 503 RESAWILQQEDTDRPSISSNRPWGLVSLLLPSAPNRKSFTKKKSNKFAIETVKNLL 558
>AL161651-3|CAI14218.1| 582|Homo sapiens novel protein protein.
Length = 582
Score = 31.5 bits (68), Expect = 3.4
Identities = 20/56 (35%), Positives = 31/56 (55%), Gaps = 5/56 (8%)
Frame = -1
Query: 591 RRKSHLLQIRETLKPS---SRHWK--TLLLRQVPRQKKTTKKRINLKTIKIVKKMM 439
R + +LQ +T +PS +R W +LLL P +K TKK+ N I+ VK ++
Sbjct: 503 RESAWILQQEDTDRPSISSNRPWGLVSLLLPSAPNRKSFTKKKSNKFAIETVKNLL 558
>AK001348-1|BAA91641.1| 582|Homo sapiens protein ( Homo sapiens
cDNA FLJ10486 fis, clone NT2RP2000205. ).
Length = 582
Score = 31.5 bits (68), Expect = 3.4
Identities = 20/56 (35%), Positives = 31/56 (55%), Gaps = 5/56 (8%)
Frame = -1
Query: 591 RRKSHLLQIRETLKPS---SRHWK--TLLLRQVPRQKKTTKKRINLKTIKIVKKMM 439
R + +LQ +T +PS +R W +LLL P +K TKK+ N I+ VK ++
Sbjct: 503 RESAWILQQEDTDRPSISSNRPWGLVSLLLPSAPNRKSFTKKKSNKFAIETVKNLL 558
>AB194709-1|BAD98252.1| 582|Homo sapiens mitochondrial polyA
polymerase protein.
Length = 582
Score = 31.5 bits (68), Expect = 3.4
Identities = 20/56 (35%), Positives = 31/56 (55%), Gaps = 5/56 (8%)
Frame = -1
Query: 591 RRKSHLLQIRETLKPS---SRHWK--TLLLRQVPRQKKTTKKRINLKTIKIVKKMM 439
R + +LQ +T +PS +R W +LLL P +K TKK+ N I+ VK ++
Sbjct: 503 RESAWILQQEDTDRPSISSNRPWGLVSLLLPSAPNRKSFTKKKSNKFAIETVKNLL 558
>BC061703-1|AAH61703.1| 582|Homo sapiens PAP associated domain
containing 1 protein.
Length = 582
Score = 31.1 bits (67), Expect = 4.5
Identities = 20/56 (35%), Positives = 31/56 (55%), Gaps = 5/56 (8%)
Frame = -1
Query: 591 RRKSHLLQIRETLKPS---SRHWK--TLLLRQVPRQKKTTKKRINLKTIKIVKKMM 439
R + +LQ +T +PS +R W +LLL P +K TKK+ N I+ VK ++
Sbjct: 503 RESAWILQQEDTDRPSISSNRPWGLVSLLLPSAPNRKSFTKKKNNKFAIETVKNLL 558
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,953,516
Number of Sequences: 237096
Number of extensions: 1898083
Number of successful extensions: 4392
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 4194
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4388
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9127122082
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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